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The map label for this gene is ybbM [C]

Identifier: 115351764

GI number: 115351764

Start: 1895206

End: 1896009

Strand: Direct

Name: ybbM [C]

Synonym: Bamb_1713

Alternate gene names: 115351764

Gene position: 1895206-1896009 (Clockwise)

Preceding gene: 115351763

Following gene: 115351768

Centisome position: 53.29

GC content: 68.66

Gene sequence:

>804_bases
ATGAGCCCGTCGTTGCAGGAGCTGAGTCTCGTCGACGTCGGCATCGCCGCCGGCCTCGTCGCGGTCAACGGCGCGATTTC
GGCCGCGCTGTCGCTCGGCCTCGGGCGCAAGCTCGCGCTCGCTGCCGTGCGCACCGTCGTGCAGCTGCTCGCGATCGGCT
ACGTGCTCGGCTGGGTGTTCGGCCATCCGCACTGGAGCGTCGTGCTGCCGATCACCGCGCTGATGACGTTGATCGCCGGC
TTTGCGGGCGCCGGTCGCGGCAAGCATGCGTATCGCGGACAACGCGTCGACAGCATCGCGTCGATCTGGTTCAGCAGCTG
GTTCGTCGCGGCGATCGGCCTGTTCGTCGTGATCCGCATTCATCCGTGGTACACGCCGCAATATGTGATCCCGATCCTCG
GGATGATCCTCGGCAATACGCTGACGGGCGTGTCGCTCGGCGTCGAGCGGATGATGGAGGAACTGACCGCGCGGCGCGAC
CGCGTCGAGACCGCACTCGCGCTCGGCGCAACGCGCTGGGAAGCCGCGCAGGACGCCGCGCGCCAGGCCGTGCGCGCAGG
CATGCTGCCGACGCTCAACCAGATGGCCGTGGTCGGCGTCGTGAGCCTGCCGGGGATGATGACGGGTCAGGTGCTGGCCG
GCCAGTCGCCGCTGCAGGCCGTGCGCTATCAGATCGTGATCATGTTCCTGATCGCCGCGGCATCCGCGCTCGGTACCGTC
GGCGCGGTGCTGATGACGTATCGCCGGCTGTTCTCGGCCGATCACCGCTTTCTCGCGTCGCGGCTAGAGGAGCGCACGCC
GTGA

Upstream 100 bases:

>100_bases
GGATCTCGCACGATCCGGCGCAGGCCGCACGAATCGGCACGATGCTGCTCGTGATGCAGGCCGGCGTACTGCACGCCGCG
CGCGCGACGCAGGCGGCGCA

Downstream 100 bases:

>100_bases
CGCGCGCCGTGACGCGCGCCTGCCGACACGCACGCGGCCTTCGCGCGGCGTGCGGTCAGCGCGCCGCGCGGCGCTTTCCG
AGCGCCTGACGCAACGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSPSLQELSLVDVGIAAGLVAVNGAISAALSLGLGRKLALAAVRTVVQLLAIGYVLGWVFGHPHWSVVLPITALMTLIAG
FAGAGRGKHAYRGQRVDSIASIWFSSWFVAAIGLFVVIRIHPWYTPQYVIPILGMILGNTLTGVSLGVERMMEELTARRD
RVETALALGATRWEAAQDAARQAVRAGMLPTLNQMAVVGVVSLPGMMTGQVLAGQSPLQAVRYQIVIMFLIAAASALGTV
GAVLMTYRRLFSADHRFLASRLEERTP

Sequences:

>Translated_267_residues
MSPSLQELSLVDVGIAAGLVAVNGAISAALSLGLGRKLALAAVRTVVQLLAIGYVLGWVFGHPHWSVVLPITALMTLIAG
FAGAGRGKHAYRGQRVDSIASIWFSSWFVAAIGLFVVIRIHPWYTPQYVIPILGMILGNTLTGVSLGVERMMEELTARRD
RVETALALGATRWEAAQDAARQAVRAGMLPTLNQMAVVGVVSLPGMMTGQVLAGQSPLQAVRYQIVIMFLIAAASALGTV
GAVLMTYRRLFSADHRFLASRLEERTP
>Mature_266_residues
SPSLQELSLVDVGIAAGLVAVNGAISAALSLGLGRKLALAAVRTVVQLLAIGYVLGWVFGHPHWSVVLPITALMTLIAGF
AGAGRGKHAYRGQRVDSIASIWFSSWFVAAIGLFVVIRIHPWYTPQYVIPILGMILGNTLTGVSLGVERMMEELTARRDR
VETALALGATRWEAAQDAARQAVRAGMLPTLNQMAVVGVVSLPGMMTGQVLAGQSPLQAVRYQIVIMFLIAAASALGTVG
AVLMTYRRLFSADHRFLASRLEERTP

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=259, Percent_Identity=30.1158301158301, Blast_Score=138, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 28502; Mature: 28371

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SPSLQELSLVDVGIAAGLVAVNGAISAALSLGLGRKLALAAVRTVVQLLAIGYVLGWVF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
GHPHWSVVLPITALMTLIAGFAGAGRGKHAYRGQRVDSIASIWFSSWFVAAIGLFVVIRI
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
HPWYTPQYVIPILGMILGNTLTGVSLGVERMMEELTARRDRVETALALGATRWEAAQDAA
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQAVRAGMLPTLNQMAVVGVVSLPGMMTGQVLAGQSPLQAVRYQIVIMFLIAAASALGTV
HHHHHHCCCCCHHHHHHHHHHHCCCHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GAVLMTYRRLFSADHRFLASRLEERTP
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]