BacMap

Definition	Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession	NC_008390
Length	3,556,545

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The map label for this gene is pstB1 [H]

Identifier: 115351763

GI number: 115351763

Start: 1894409

End: 1895209

Strand: Direct

Name: pstB1 [H]

Synonym: Bamb_1712

Alternate gene names: 115351763

Gene position: 1894409-1895209 (Clockwise)

Preceding gene: 115351761

Following gene: 115351764

Centisome position: 53.27

GC content: 68.66

Gene sequence:

>801_bases
GTGAGTGAATCGAACACGACACCGGCGGCTTTCAATCGGTATTATGGCGCACGCTGCGCCAATGCTTCGGCGCCGTTAAC
GCTTTTTTTCATTTGTGACATGACCGTCCCTACCGGCCTCATCGATGCGCAACAGATCACGCGCCGCGACGCCAGCAGCG
GCAAGACGTTGCTGACGCCGACCGACTTCAGCCTCGCCGCGGGATCGCGAATTGCTATCACGGGAGCGTCGGGTTCCGGC
AAGAGCGTGCTGCTGCGCGCGCTCGCGTTGCTCGATCCGCTCGATGGCGGTCACATCCTGTGGCGCGGCAAGCGCATCCG
GCGCGGCGCGATTCCGGGCTACCGGCGCCGTGTCGCGTACGTGCGCCAGCGGCCCGCGCAAATGGACAGGACCGTCGAAG
CGCAATTGCGCTACCCGTACTCGCTCGCGATCTATCGCGACGCGACGTTCGACCGTGCGCGCGCCGAAGCGCTCGCGGCG
CGCGCCGGTCGCGGCGCCGACTTCCTCGACAAGCGTGCGAGCGAACTGTCGGGCGGCGAAGCGCAGATCGCCGCGCTGCT
GCGCGTGCTGCAGCTCGATCCCGACGTGCTGCTGCTCGACGAGCCGACGTCCGCGCTCGACCCCGAGTCGACGCGCGCGA
TCGAAGCGCTCGTCGGCGCGTGGTTCGACGCGGCGCCCGACGCGCGCGCGTACATGTGGATCTCGCACGATCCGGCGCAG
GCCGCACGAATCGGCACGATGCTGCTCGTGATGCAGGCCGGCGTACTGCACGCCGCGCGCGCGACGCAGGCGGCGCAATG
A

Upstream 100 bases:

>100_bases
ACCGACAATCCATGCAGCCGACTTGCCAATGGCTCGAGCTAGCGTCATGGCGGTTCCGTTGTTGTTCTGCAGAGTTTGCG
CGCCATGTCGGGCCCCTCCT

Downstream 100 bases:

>100_bases
GCCCGTCGTTGCAGGAGCTGAGTCTCGTCGACGTCGGCATCGCCGCCGGCCTCGTCGCGGTCAACGGCGCGATTTCGGCC
GCGCTGTCGCTCGGCCTCGG

Product: ABC transporter-like protein

Products: NA

Alternate protein names: ABC phosphate transporter 1; Phosphate-transporting ATPase 1 [H]

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MSESNTTPAAFNRYYGARCANASAPLTLFFICDMTVPTGLIDAQQITRRDASSGKTLLTPTDFSLAAGSRIAITGASGSG
KSVLLRALALLDPLDGGHILWRGKRIRRGAIPGYRRRVAYVRQRPAQMDRTVEAQLRYPYSLAIYRDATFDRARAEALAA
RAGRGADFLDKRASELSGGEAQIAALLRVLQLDPDVLLLDEPTSALDPESTRAIEALVGAWFDAAPDARAYMWISHDPAQ
AARIGTMLLVMQAGVLHAARATQAAQ

Sequences:

>Translated_266_residues
MSESNTTPAAFNRYYGARCANASAPLTLFFICDMTVPTGLIDAQQITRRDASSGKTLLTPTDFSLAAGSRIAITGASGSG
KSVLLRALALLDPLDGGHILWRGKRIRRGAIPGYRRRVAYVRQRPAQMDRTVEAQLRYPYSLAIYRDATFDRARAEALAA
RAGRGADFLDKRASELSGGEAQIAALLRVLQLDPDVLLLDEPTSALDPESTRAIEALVGAWFDAAPDARAYMWISHDPAQ
AARIGTMLLVMQAGVLHAARATQAAQ
>Mature_265_residues
SESNTTPAAFNRYYGARCANASAPLTLFFICDMTVPTGLIDAQQITRRDASSGKTLLTPTDFSLAAGSRIAITGASGSGK
SVLLRALALLDPLDGGHILWRGKRIRRGAIPGYRRRVAYVRQRPAQMDRTVEAQLRYPYSLAIYRDATFDRARAEALAAR
AGRGADFLDKRASELSGGEAQIAALLRVLQLDPDVLLLDEPTSALDPESTRAIEALVGAWFDAAPDARAYMWISHDPAQA
ARIGTMLLVMQAGVLHAARATQAAQ

Specific function: Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system [H]

COG id: COG4619

COG function: function code R; ABC-type uncharacterized transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI9955966, Length=183, Percent_Identity=31.6939890710383, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI45243524, Length=183, Percent_Identity=31.6939890710383, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI9955968, Length=183, Percent_Identity=31.6939890710383, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI255708477, Length=211, Percent_Identity=27.4881516587678, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI42741659, Length=176, Percent_Identity=32.3863636363636, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI42490749, Length=187, Percent_Identity=31.5508021390374, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI9961250, Length=183, Percent_Identity=30.0546448087432, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI4505771, Length=183, Percent_Identity=30.0546448087432, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI9961252, Length=183, Percent_Identity=30.0546448087432, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI21536378, Length=192, Percent_Identity=28.125, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI9665248, Length=164, Percent_Identity=33.5365853658537, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI9955963, Length=173, Percent_Identity=30.635838150289, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1786698, Length=205, Percent_Identity=33.1707317073171, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1789962, Length=199, Percent_Identity=30.6532663316583, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787143, Length=190, Percent_Identity=32.6315789473684, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788761, Length=227, Percent_Identity=28.1938325991189, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1786345, Length=205, Percent_Identity=32.1951219512195, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786872, Length=183, Percent_Identity=30.6010928961749, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789891, Length=206, Percent_Identity=29.6116504854369, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787029, Length=210, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI145693107, Length=204, Percent_Identity=33.8235294117647, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1788450, Length=202, Percent_Identity=31.1881188118812, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1788225, Length=220, Percent_Identity=32.2727272727273, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1786398, Length=185, Percent_Identity=32.972972972973, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87081709, Length=220, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787089, Length=200, Percent_Identity=32, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87081834, Length=220, Percent_Identity=29.5454545454545, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1789672, Length=210, Percent_Identity=26.1904761904762, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1790162, Length=221, Percent_Identity=30.316742081448, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789032, Length=199, Percent_Identity=33.6683417085427, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787792, Length=211, Percent_Identity=27.9620853080569, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786563, Length=202, Percent_Identity=28.2178217821782, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790467, Length=203, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790544, Length=173, Percent_Identity=32.9479768786127, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787500, Length=241, Percent_Identity=26.9709543568465, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787370, Length=216, Percent_Identity=25, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1788506, Length=191, Percent_Identity=31.413612565445, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789873, Length=213, Percent_Identity=29.5774647887324, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI2367384, Length=198, Percent_Identity=30.8080808080808, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1786253, Length=199, Percent_Identity=31.1557788944724, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1787758, Length=196, Percent_Identity=31.6326530612245, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787105, Length=200, Percent_Identity=31.5, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI87082267, Length=205, Percent_Identity=29.2682926829268, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=213, Percent_Identity=32.8638497652582, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI193211015, Length=213, Percent_Identity=32.8638497652582, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI193211017, Length=213, Percent_Identity=32.8638497652582, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17567265, Length=191, Percent_Identity=31.413612565445, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI193202349, Length=198, Percent_Identity=32.8282828282828, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17541710, Length=184, Percent_Identity=33.1521739130435, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17558664, Length=198, Percent_Identity=32.8282828282828, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI212646699, Length=201, Percent_Identity=30.3482587064677, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25146777, Length=183, Percent_Identity=30.0546448087432, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71992285, Length=185, Percent_Identity=29.7297297297297, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI115535101, Length=178, Percent_Identity=34.2696629213483, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17565938, Length=193, Percent_Identity=30.5699481865285, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17567269, Length=193, Percent_Identity=30.5699481865285, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI193209708, Length=192, Percent_Identity=32.2916666666667, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71992290, Length=187, Percent_Identity=28.8770053475936, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI115533592, Length=195, Percent_Identity=29.2307692307692, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17569143, Length=210, Percent_Identity=29.5238095238095, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17569145, Length=211, Percent_Identity=29.3838862559242, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17533971, Length=203, Percent_Identity=26.1083743842365, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71984940, Length=171, Percent_Identity=30.4093567251462, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323217, Length=162, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6323959, Length=232, Percent_Identity=27.5862068965517, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6322640, Length=195, Percent_Identity=28.7179487179487, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI85726357, Length=185, Percent_Identity=29.1891891891892, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21357907, Length=169, Percent_Identity=32.5443786982249, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24659289, Length=175, Percent_Identity=33.1428571428571, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24653245, Length=215, Percent_Identity=28.8372093023256, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI281363262, Length=215, Percent_Identity=28.8372093023256, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17136662, Length=181, Percent_Identity=31.4917127071823, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015850
- InterPro:   IPR003593
- InterPro:   IPR005670 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: =3.6.3.27 [H]

Molecular weight: Translated: 28686; Mature: 28555

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESNTTPAAFNRYYGARCANASAPLTLFFICDMTVPTGLIDAQQITRRDASSGKTLLTP
CCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEECC
TDFSLAAGSRIAITGASGSGKSVLLRALALLDPLDGGHILWRGKRIRRGAIPGYRRRVAY
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHH
VRQRPAQMDRTVEAQLRYPYSLAIYRDATFDRARAEALAARAGRGADFLDKRASELSGGE
HHHCHHHHCCHHHHEECCCEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCH
AQIAALLRVLQLDPDVLLLDEPTSALDPESTRAIEALVGAWFDAAPDARAYMWISHDPAQ
HHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCHHH
AARIGTMLLVMQAGVLHAARATQAAQ
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SESNTTPAAFNRYYGARCANASAPLTLFFICDMTVPTGLIDAQQITRRDASSGKTLLTP
CCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEECC
TDFSLAAGSRIAITGASGSGKSVLLRALALLDPLDGGHILWRGKRIRRGAIPGYRRRVAY
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHH
VRQRPAQMDRTVEAQLRYPYSLAIYRDATFDRARAEALAARAGRGADFLDKRASELSGGE
HHHCHHHHCCHHHHEECCCEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCH
AQIAALLRVLQLDPDVLLLDEPTSALDPESTRAIEALVGAWFDAAPDARAYMWISHDPAQ
HHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCHHH
AARIGTMLLVMQAGVLHAARATQAAQ
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]