| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351761
Identifier: 115351761
GI number: 115351761
Start: 1891477
End: 1891929
Strand: Direct
Name: 115351761
Synonym: Bamb_1710
Alternate gene names: NA
Gene position: 1891477-1891929 (Clockwise)
Preceding gene: 115351751
Following gene: 115351763
Centisome position: 53.18
GC content: 67.77
Gene sequence:
>453_bases ATGCCAACCAGCCAGCTTCGAGAACAACTCGTCGGCGCATGGCGCCTCGTTTCCTACGAAATCCGCCCGCGCGACGGCGG CACCGTCACCTACCCGCTCGGCCGCGACGCGCGCGGCTGGATCCTGTACACGCCGGACGGCTACATGTCCGCGCAGTTGA TGGCGCCCGGCCGCCCGCCTTATGCGGACGGCGACCTGCAGGGCGGCAGCGTCGAGGAACGCGCCGCCGCCGCCCACGGC TACATCGCATATTCAGGCCCTTTTAACGTCGACGACGACGGCACGCTGACCCATGAAATGGACGTGAGCCTGTATCCGAA CTGGATCGGCAACGTCCAGCAGCGGGTTGTCAGTATCGACGGCGACCGGATGCAACTCGGCACCGCCGGGCCCGTCGTCA TCAACGGCCGGGAGGTTGACGCGGTACTCGTCTGGGTGCGCGCCCGCCGCTGA
Upstream 100 bases:
>100_bases ACCACGCCGCCGCGGCACCCGCGCTACGGTCGTTGCCCGGTGCCCGCTGCCCCGTCAACACGACGGCATACGCGCCATCG CCGTCACACCGGAACCCCGC
Downstream 100 bases:
>100_bases GCAGCGGCCGCTGGAGCTACCGCGCGACGGCGGCGGGACCTAGAGGCGGCAACCGGGAGCGGCGCCCCAACGAGCGCGGC CGGTCAGCGCGGCACCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MPTSQLREQLVGAWRLVSYEIRPRDGGTVTYPLGRDARGWILYTPDGYMSAQLMAPGRPPYADGDLQGGSVEERAAAAHG YIAYSGPFNVDDDGTLTHEMDVSLYPNWIGNVQQRVVSIDGDRMQLGTAGPVVINGREVDAVLVWVRARR
Sequences:
>Translated_150_residues MPTSQLREQLVGAWRLVSYEIRPRDGGTVTYPLGRDARGWILYTPDGYMSAQLMAPGRPPYADGDLQGGSVEERAAAAHG YIAYSGPFNVDDDGTLTHEMDVSLYPNWIGNVQQRVVSIDGDRMQLGTAGPVVINGREVDAVLVWVRARR >Mature_149_residues PTSQLREQLVGAWRLVSYEIRPRDGGTVTYPLGRDARGWILYTPDGYMSAQLMAPGRPPYADGDLQGGSVEERAAAAHGY IAYSGPFNVDDDGTLTHEMDVSLYPNWIGNVQQRVVSIDGDRMQLGTAGPVVINGREVDAVLVWVRARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16492; Mature: 16361
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSQLREQLVGAWRLVSYEIRPRDGGTVTYPLGRDARGWILYTPDGYMSAQLMAPGRPP CCHHHHHHHHHCEEEEEEEEEECCCCCEEEEECCCCCCEEEEECCCCCEEEEEECCCCCC YADGDLQGGSVEERAAAAHGYIAYSGPFNVDDDGTLTHEMDVSLYPNWIGNVQQRVVSID CCCCCCCCCCCHHHHHHHCCEEEECCCCCCCCCCEEEEEEEEEECCCHHCCCEEEEEECC GDRMQLGTAGPVVINGREVDAVLVWVRARR CCEEEECCCCCEEECCCEEEEEEEEEEECC >Mature Secondary Structure PTSQLREQLVGAWRLVSYEIRPRDGGTVTYPLGRDARGWILYTPDGYMSAQLMAPGRPP CHHHHHHHHHCEEEEEEEEEECCCCCEEEEECCCCCCEEEEECCCCCEEEEEECCCCCC YADGDLQGGSVEERAAAAHGYIAYSGPFNVDDDGTLTHEMDVSLYPNWIGNVQQRVVSID CCCCCCCCCCCHHHHHHHCCEEEECCCCCCCCCCEEEEEEEEEECCCHHCCCEEEEEECC GDRMQLGTAGPVVINGREVDAVLVWVRARR CCEEEECCCCCEEECCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA