Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351751

Identifier: 115351751

GI number: 115351751

Start: 1881026

End: 1881691

Strand: Direct

Name: 115351751

Synonym: Bamb_1699

Alternate gene names: NA

Gene position: 1881026-1881691 (Clockwise)

Preceding gene: 115351749

Following gene: 115351761

Centisome position: 52.89

GC content: 66.52

Gene sequence:

>666_bases
ATGCGGGACATCAACATCGAATGGCTGACGCGCGCCGCCGAATTCGACCATCTGTTCCAGACGCGCTGGCTCGGCGAGCG
CTTCTTCCATCTGCCCGGCGACATGCTCGCCCTGCAGGAACTGATCTGGCGCGCGCGTCCCGACTGCATCGTGCAGACCG
GCATCGCGGCGGGCGGCGGCGTCGTATTCTCCGCGTCGATGCTGGAATTGACGGGTGGCCACGGCCGTGTGGTCGCGATC
GAACCGCGCCTGCGCGACGAGGTCAGGCAGCGCCTGCAATCGCACCGGCTCGCCCATCGCATGGTGCTGATCGAAGGCGA
ATCGTGCGCAACCGACACGCTCGCATCGGTACGCGCGCGGATCGGCGACGGCGCGCGCGTGATGGCGATCCTCGATCTCA
CGCATACGCACGCGCACGTGCTGCGCGAACTCGCCTGCTATGCGCCGCTCGTGACGCCCGGCAGCTACGCGATCGTGATG
GATACCATCATGGAGTATCTGCCCGAGTCGATGTTCGACGGCAAGCCGTACGGCAGAGGCAACAACCCGGCCACGGCCGT
GCATGCGTTTCTCGCCGGCGACGACCGGTTCGAAGTCGACCACGACATCGAGGACCGCGTGCTCATGACGCTGTCGCCAG
GCGGCTTCCTGAAGCGAGTGCGCTGA

Upstream 100 bases:

>100_bases
CGCCGGCGCGATGTTCCAGTACCGGTGAAGCCACGGTTCCAGCGTTTTCACGTCATTCCTACTCGTTGCATTGACCATGT
CAGAGCGTCCTTCGGCCCGC

Downstream 100 bases:

>100_bases
TCAGGCGGGCGGCCTGCGCCGAACCGTCGCGCGCGTAGCTCGCGCGGATCCGCGCCGCCTGCTCGCGCAACGATCCGGGA
CGCAACAGGCGTTCGAGCGC

Product: cephalosporin hydroxylase

Products: NA

Alternate protein names: Cephalosporin Hydroxylase Family Protein; Preprotein Translocase ATPase Subunit; Cephalosporin Hydroxylase Cmci; Cephalosporin Protein

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRDINIEWLTRAAEFDHLFQTRWLGERFFHLPGDMLALQELIWRARPDCIVQTGIAAGGGVVFSASMLELTGGHGRVVAI
EPRLRDEVRQRLQSHRLAHRMVLIEGESCATDTLASVRARIGDGARVMAILDLTHTHAHVLRELACYAPLVTPGSYAIVM
DTIMEYLPESMFDGKPYGRGNNPATAVHAFLAGDDRFEVDHDIEDRVLMTLSPGGFLKRVR

Sequences:

>Translated_221_residues
MRDINIEWLTRAAEFDHLFQTRWLGERFFHLPGDMLALQELIWRARPDCIVQTGIAAGGGVVFSASMLELTGGHGRVVAI
EPRLRDEVRQRLQSHRLAHRMVLIEGESCATDTLASVRARIGDGARVMAILDLTHTHAHVLRELACYAPLVTPGSYAIVM
DTIMEYLPESMFDGKPYGRGNNPATAVHAFLAGDDRFEVDHDIEDRVLMTLSPGGFLKRVR
>Mature_221_residues
MRDINIEWLTRAAEFDHLFQTRWLGERFFHLPGDMLALQELIWRARPDCIVQTGIAAGGGVVFSASMLELTGGHGRVVAI
EPRLRDEVRQRLQSHRLAHRMVLIEGESCATDTLASVRARIGDGARVMAILDLTHTHAHVLRELACYAPLVTPGSYAIVM
DTIMEYLPESMFDGKPYGRGNNPATAVHAFLAGDDRFEVDHDIEDRVLMTLSPGGFLKRVR

Specific function: Unknown

COG id: COG3510

COG function: function code V; Cephalosporin hydroxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24717; Mature: 24717

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDINIEWLTRAAEFDHLFQTRWLGERFFHLPGDMLALQELIWRARPDCIVQTGIAAGGG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCCC
VVFSASMLELTGGHGRVVAIEPRLRDEVRQRLQSHRLAHRMVLIEGESCATDTLASVRAR
CEEEEEHHEEECCCCEEEEECCHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHH
IGDGARVMAILDLTHTHAHVLRELACYAPLVTPGSYAIVMDTIMEYLPESMFDGKPYGRG
CCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
NNPATAVHAFLAGDDRFEVDHDIEDRVLMTLSPGGFLKRVR
CCCHHHHEEEECCCCCCCCCCCCCCCEEEEECCCHHHHCCC
>Mature Secondary Structure
MRDINIEWLTRAAEFDHLFQTRWLGERFFHLPGDMLALQELIWRARPDCIVQTGIAAGGG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCCC
VVFSASMLELTGGHGRVVAIEPRLRDEVRQRLQSHRLAHRMVLIEGESCATDTLASVRAR
CEEEEEHHEEECCCCEEEEECCHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHH
IGDGARVMAILDLTHTHAHVLRELACYAPLVTPGSYAIVMDTIMEYLPESMFDGKPYGRG
CCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
NNPATAVHAFLAGDDRFEVDHDIEDRVLMTLSPGGFLKRVR
CCCHHHHEEEECCCCCCCCCCCCCCCEEEEECCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA