Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351723

Identifier: 115351723

GI number: 115351723

Start: 1847292

End: 1848098

Strand: Direct

Name: 115351723

Synonym: Bamb_1671

Alternate gene names: NA

Gene position: 1847292-1848098 (Clockwise)

Preceding gene: 115351722

Following gene: 115351728

Centisome position: 51.94

GC content: 74.1

Gene sequence:

>807_bases
ATGCTGATTTCCCTCGTACTCGGCGGCTTCGTCGGCGCCGTGCTCGGCCTCACCGGCGCGGGCGGCGGCATTCTCGCGGT
GCCCGCGCTCGTCGCCGGGATGGGCTGGCCGATGCAGCAAGCCACGCCCGTCGCGCTCGTCGCGGTCGCGGGCAGCGCCG
CGCTCGGCGCGCTCGAAGGGTTTCGCCGCGGGCTCGTGCGCTATCGCGCGGCGCTGCTGATGGCCGTGGCCGGCGTGCCG
CTCACGACGCTCGGCGTGCGGCTCGCGCACGTGCTGCCGCAGCGCGTGCTGCTGGCGCTGTTCGCGCTGACGATGCTGGT
CGTCGCGGGCCGCCTGCTACGGCAGGCGCTGCGCAACGCGCCCGGCGACACGGCCGAATCGCCGCTGTGCGTCGGTCGCG
TGAATCCCGATACCGGCCGGCTCGTGTGGTCCTGGCCGGTCGGCGTCGCGCTCGCGTCGACCGGCGCGGTGACGGGACTG
ATGACGGGGCTGCTGGGCGTCGGCGGCGGCTTCGTGATCGTGCCGATGCTGCGCAAGTTCACGAACGTGTCGATGCACGG
CGTGGTCGCGACGTCGCTGATGGTGATCGCGTTGGTCGGCACCGGCGGCGTGTTCGCGACGCTCGTGTCGGGCACGCGCG
CGCCGCTCGACATGATGCTATGGTTCACGGTCGCGACCGCGCTCGGGATGGCCGTCGGCCGCAGCGCGTCCCGGCACCTG
TCCGCGCGGCACGTGCAGGCCGGCTTCGCGGCCGTGCTCGTCTGCGTGGCGTGCGGGCTGCTGGCGAAGGCGGCGTTCGG
CGCCTAA

Upstream 100 bases:

>100_bases
GGAGCGCGTGCTGCCGCCGCTCTACTGGAAGGCGATGCTCAAGGGCCGCGAATGGCTCGCGAAGCCCGCGATCGCCCGTT
GACCGGAACCCGCTGACATC

Downstream 100 bases:

>100_bases
GCCGCGCGCCGCACGCGGCGCATACCCCAAAACAAAACGCCCGGCCCGACTCGTCGTCGGCACCGGGCGTTTTTCGTTGC
GTGCGCAACCTGCGCGCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MLISLVLGGFVGAVLGLTGAGGGILAVPALVAGMGWPMQQATPVALVAVAGSAALGALEGFRRGLVRYRAALLMAVAGVP
LTTLGVRLAHVLPQRVLLALFALTMLVVAGRLLRQALRNAPGDTAESPLCVGRVNPDTGRLVWSWPVGVALASTGAVTGL
MTGLLGVGGGFVIVPMLRKFTNVSMHGVVATSLMVIALVGTGGVFATLVSGTRAPLDMMLWFTVATALGMAVGRSASRHL
SARHVQAGFAAVLVCVACGLLAKAAFGA

Sequences:

>Translated_268_residues
MLISLVLGGFVGAVLGLTGAGGGILAVPALVAGMGWPMQQATPVALVAVAGSAALGALEGFRRGLVRYRAALLMAVAGVP
LTTLGVRLAHVLPQRVLLALFALTMLVVAGRLLRQALRNAPGDTAESPLCVGRVNPDTGRLVWSWPVGVALASTGAVTGL
MTGLLGVGGGFVIVPMLRKFTNVSMHGVVATSLMVIALVGTGGVFATLVSGTRAPLDMMLWFTVATALGMAVGRSASRHL
SARHVQAGFAAVLVCVACGLLAKAAFGA
>Mature_268_residues
MLISLVLGGFVGAVLGLTGAGGGILAVPALVAGMGWPMQQATPVALVAVAGSAALGALEGFRRGLVRYRAALLMAVAGVP
LTTLGVRLAHVLPQRVLLALFALTMLVVAGRLLRQALRNAPGDTAESPLCVGRVNPDTGRLVWSWPVGVALASTGAVTGL
MTGLLGVGGGFVIVPMLRKFTNVSMHGVVATSLMVIALVGTGGVFATLVSGTRAPLDMMLWFTVATALGMAVGRSASRHL
SARHVQAGFAAVLVCVACGLLAKAAFGA

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26967; Mature: 26967

Theoretical pI: Translated: 12.29; Mature: 12.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA