Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

Click here to switch to the map view.

The map label for this gene is blh [H]

Identifier: 115351722

GI number: 115351722

Start: 1845594

End: 1847273

Strand: Direct

Name: blh [H]

Synonym: Bamb_1670

Alternate gene names: 115351722

Gene position: 1845594-1847273 (Clockwise)

Preceding gene: 115351721

Following gene: 115351723

Centisome position: 51.89

GC content: 72.5

Gene sequence:

>1680_bases
ATGACCATCCGCCCGCTGACCGACCTGCTGTCGGTCTCGCCCCAGATCGCCGCGACCGACCTGCCCGCGCTGCACGCGGC
GGGCATCCGCGCGATCGTCTGCAACCGTCCGGACGGCGAAGGCGCCGACCAACCGACCGTCGCCGAGATCCGCGCCGCCG
CCGCGCCGCTCGGCATCGCCGTGCATTACCTGCCCGTCGATACCGGCAAGGTCACCGACGAGCAGGCCGCGCAGTTCGGC
GCGCTCGTCGCGACGCTCGCCGGCCCGGTCCTCGCGTACTGCCGCAGCGGCACGCGTTCGGCGACGCTGTGGGCGCTGTC
GCAGGCGGGCCGACGCCCGGCCGGCGACATCGTCGCGAGCGCCGCCGCGGCCGGCTACGACCTCGGCGCGCTCGCGCCGC
GTCTTGCGCAACGCGTGGCGCCAGGCGTCGATCAGGCCGCACCGGCCGTCGACGCGCGGCACGACATCGTGATCGTCGGC
GCGGGCGCGGCCGGCGTCGCGGTCGCGTCGAGCCTGCTTGCGCGCGACGCGTCGCTCGATATCGCGGTGATCGATCCGGC
CGATACCCACTACTACCAGCCGGGCTGGACGATGGTCGGCGCGGGCGTGTTCCGGCCCGACACGACCGCGCGCCGGATGG
CCGACCTGCTGCCGCGCGGCGTGACATGGATCCAGGCGGCGGTCGCCGGCTTCGAACCCGACGCGCACGCGGTCGTGCTC
GACGGCTGCCGGCGCATCGGCTACCGGAGGCTGGTCGTGTGCCCGGGGCTCAAGCTCGACTGGCACGCGATCGACGGCCT
CGCGCAAACCCTCGGCCGCAACGGCGTCACGTCGAACTATCGCTACGATCTCGCGCCGTACACGTGGGAACTGGTGCAGG
CGTTCCGCGGCGGCAATGCGCTGTTCACGCAGCCGCCGATGCCGATCAAGTGCGCGGGCGCGCCGCAAAAGGCGATGTAC
CTGTCGTGCGATCACTGGCGGCGCACGGGGCGCCTCGGCGCCGCGAACGTCGAGTTCCTGAATGCGGGCGGCGCGCTGTT
CGGCGTCGCCGACTACGTGCCCGCGCTGATGGAATACGTGAAACGCTATGACATCGCGCTGTCGTTCGGCCACAACCTGG
TCGCGATCGACGGGCCGGCGCGACGCGCGACGTTCACACGCGCGCTGCCCGACGGCGGCACCGAAACCGTCGAGCGGGCG
TTCGACATGATCCACGTCGTGCCGCCGCAGAAGGCGCCCGATTTCGTGCGCGCGAGCCCGCTCGCCGACGCGGCCGGCTG
GATCGACGTCGATCCGGCGACGCTGCGGCACAAGCGGCACGCGGACATCTTCGCGCTCGGCGACGTCACCAACACGACCA
ACGCGAAAACCGCCGCGGCCGCACGCAAGCAGGCGCCCGTCGTCGCGCACAACCTGCTCGCGTCGCTGGGCCGCGCACAC
GGCAACGCCGCGTACGACGGCTACGGATCGTGCCCGCTCACCGTCGAGCGCGGCAAGATCGTGCTCGCCGAATTCCTGTA
CGGCGGCAAGGTCGCGCCGACCTTCCCCGCGTGGCTGATCGACGGCAAGCGCCCGTCGCGGCTCGCGTGGCTGCTCAAGG
AGCGCGTGCTGCCGCCGCTCTACTGGAAGGCGATGCTCAAGGGCCGCGAATGGCTCGCGAAGCCCGCGATCGCCCGTTGA

Upstream 100 bases:

>100_bases
CGCGCCGGCCACCTGCCCGAGCCCGAAAACAACGGCGTGCGCTACCTGAAGATCCCGCTCGACGCGATCTGAGCCGCCGC
CCCGACCGGAGAACCCCGAC

Downstream 100 bases:

>100_bases
CCGGAACCCGCTGACATCATGCTGATTTCCCTCGTACTCGGCGGCTTCGTCGGCGCCGTGCTCGGCCTCACCGGCGCGGG
CGGCGGCATTCTCGCGGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 558

Protein sequence:

>559_residues
MTIRPLTDLLSVSPQIAATDLPALHAAGIRAIVCNRPDGEGADQPTVAEIRAAAAPLGIAVHYLPVDTGKVTDEQAAQFG
ALVATLAGPVLAYCRSGTRSATLWALSQAGRRPAGDIVASAAAAGYDLGALAPRLAQRVAPGVDQAAPAVDARHDIVIVG
AGAAGVAVASSLLARDASLDIAVIDPADTHYYQPGWTMVGAGVFRPDTTARRMADLLPRGVTWIQAAVAGFEPDAHAVVL
DGCRRIGYRRLVVCPGLKLDWHAIDGLAQTLGRNGVTSNYRYDLAPYTWELVQAFRGGNALFTQPPMPIKCAGAPQKAMY
LSCDHWRRTGRLGAANVEFLNAGGALFGVADYVPALMEYVKRYDIALSFGHNLVAIDGPARRATFTRALPDGGTETVERA
FDMIHVVPPQKAPDFVRASPLADAAGWIDVDPATLRHKRHADIFALGDVTNTTNAKTAAAARKQAPVVAHNLLASLGRAH
GNAAYDGYGSCPLTVERGKIVLAEFLYGGKVAPTFPAWLIDGKRPSRLAWLLKERVLPPLYWKAMLKGREWLAKPAIAR

Sequences:

>Translated_559_residues
MTIRPLTDLLSVSPQIAATDLPALHAAGIRAIVCNRPDGEGADQPTVAEIRAAAAPLGIAVHYLPVDTGKVTDEQAAQFG
ALVATLAGPVLAYCRSGTRSATLWALSQAGRRPAGDIVASAAAAGYDLGALAPRLAQRVAPGVDQAAPAVDARHDIVIVG
AGAAGVAVASSLLARDASLDIAVIDPADTHYYQPGWTMVGAGVFRPDTTARRMADLLPRGVTWIQAAVAGFEPDAHAVVL
DGCRRIGYRRLVVCPGLKLDWHAIDGLAQTLGRNGVTSNYRYDLAPYTWELVQAFRGGNALFTQPPMPIKCAGAPQKAMY
LSCDHWRRTGRLGAANVEFLNAGGALFGVADYVPALMEYVKRYDIALSFGHNLVAIDGPARRATFTRALPDGGTETVERA
FDMIHVVPPQKAPDFVRASPLADAAGWIDVDPATLRHKRHADIFALGDVTNTTNAKTAAAARKQAPVVAHNLLASLGRAH
GNAAYDGYGSCPLTVERGKIVLAEFLYGGKVAPTFPAWLIDGKRPSRLAWLLKERVLPPLYWKAMLKGREWLAKPAIAR
>Mature_558_residues
TIRPLTDLLSVSPQIAATDLPALHAAGIRAIVCNRPDGEGADQPTVAEIRAAAAPLGIAVHYLPVDTGKVTDEQAAQFGA
LVATLAGPVLAYCRSGTRSATLWALSQAGRRPAGDIVASAAAAGYDLGALAPRLAQRVAPGVDQAAPAVDARHDIVIVGA
GAAGVAVASSLLARDASLDIAVIDPADTHYYQPGWTMVGAGVFRPDTTARRMADLLPRGVTWIQAAVAGFEPDAHAVVLD
GCRRIGYRRLVVCPGLKLDWHAIDGLAQTLGRNGVTSNYRYDLAPYTWELVQAFRGGNALFTQPPMPIKCAGAPQKAMYL
SCDHWRRTGRLGAANVEFLNAGGALFGVADYVPALMEYVKRYDIALSFGHNLVAIDGPARRATFTRALPDGGTETVERAF
DMIHVVPPQKAPDFVRASPLADAAGWIDVDPATLRHKRHADIFALGDVTNTTNAKTAAAARKQAPVVAHNLLASLGRAHG
NAAYDGYGSCPLTVERGKIVLAEFLYGGKVAPTFPAWLIDGKRPSRLAWLLKERVLPPLYWKAMLKGREWLAKPAIAR

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-B beta-lactamase family [H]

Homologues:

Organism=Homo sapiens, GI10864011, Length=403, Percent_Identity=36.2282878411911, Blast_Score=308, Evalue=1e-83,
Organism=Caenorhabditis elegans, GI115534373, Length=347, Percent_Identity=36.8876080691643, Blast_Score=237, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI17539680, Length=421, Percent_Identity=32.541567695962, Blast_Score=231, Evalue=7e-61,
Organism=Drosophila melanogaster, GI24657386, Length=396, Percent_Identity=36.6161616161616, Blast_Score=264, Evalue=1e-70,
Organism=Drosophila melanogaster, GI24657391, Length=396, Percent_Identity=36.6161616161616, Blast_Score=264, Evalue=1e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005939
- InterPro:   IPR001279 [H]

Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 59315; Mature: 59183

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRPLTDLLSVSPQIAATDLPALHAAGIRAIVCNRPDGEGADQPTVAEIRAAAAPLGIA
CCCCCHHHHHHCCCCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCEEE
VHYLPVDTGKVTDEQAAQFGALVATLAGPVLAYCRSGTRSATLWALSQAGRRPAGDIVAS
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCCHHHHHHH
AAAAGYDLGALAPRLAQRVAPGVDQAAPAVDARHDIVIVGAGAAGVAVASSLLARDASLD
HHHCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCE
IAVIDPADTHYYQPGWTMVGAGVFRPDTTARRMADLLPRGVTWIQAAVAGFEPDAHAVVL
EEEECCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEE
DGCRRIGYRRLVVCPGLKLDWHAIDGLAQTLGRNGVTSNYRYDLAPYTWELVQAFRGGNA
HHHHHCCCEEEEECCCCEECHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHCCCCE
LFTQPPMPIKCAGAPQKAMYLSCDHWRRTGRLGAANVEFLNAGGALFGVADYVPALMEYV
EEECCCCCEEECCCCCCEEEEECHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
KRYDIALSFGHNLVAIDGPARRATFTRALPDGGTETVERAFDMIHVVPPQKAPDFVRASP
HHHHEEEECCCEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHEEEECCCCCCCCCHHCCC
LADAAGWIDVDPATLRHKRHADIFALGDVTNTTNAKTAAAARKQAPVVAHNLLASLGRAH
CCCCCCEEECCHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCC
GNAAYDGYGSCPLTVERGKIVLAEFLYGGKVAPTFPAWLIDGKRPSRLAWLLKERVLPPL
CCCCCCCCCCCCEEEECCCEEEEEHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCHH
YWKAMLKGREWLAKPAIAR
HHHHHHHCHHHHCCCCCCC
>Mature Secondary Structure 
TIRPLTDLLSVSPQIAATDLPALHAAGIRAIVCNRPDGEGADQPTVAEIRAAAAPLGIA
CCCCHHHHHHCCCCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCEEE
VHYLPVDTGKVTDEQAAQFGALVATLAGPVLAYCRSGTRSATLWALSQAGRRPAGDIVAS
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCCHHHHHHH
AAAAGYDLGALAPRLAQRVAPGVDQAAPAVDARHDIVIVGAGAAGVAVASSLLARDASLD
HHHCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCE
IAVIDPADTHYYQPGWTMVGAGVFRPDTTARRMADLLPRGVTWIQAAVAGFEPDAHAVVL
EEEECCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEE
DGCRRIGYRRLVVCPGLKLDWHAIDGLAQTLGRNGVTSNYRYDLAPYTWELVQAFRGGNA
HHHHHCCCEEEEECCCCEECHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHCCCCE
LFTQPPMPIKCAGAPQKAMYLSCDHWRRTGRLGAANVEFLNAGGALFGVADYVPALMEYV
EEECCCCCEEECCCCCCEEEEECHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
KRYDIALSFGHNLVAIDGPARRATFTRALPDGGTETVERAFDMIHVVPPQKAPDFVRASP
HHHHEEEECCCEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHEEEECCCCCCCCCHHCCC
LADAAGWIDVDPATLRHKRHADIFALGDVTNTTNAKTAAAARKQAPVVAHNLLASLGRAH
CCCCCCEEECCHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCC
GNAAYDGYGSCPLTVERGKIVLAEFLYGGKVAPTFPAWLIDGKRPSRLAWLLKERVLPPL
CCCCCCCCCCCCEEEECCCEEEEEHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCHH
YWKAMLKGREWLAKPAIAR
HHHHHHHCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]