Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351699

Identifier: 115351699

GI number: 115351699

Start: 1820769

End: 1821311

Strand: Direct

Name: 115351699

Synonym: Bamb_1647

Alternate gene names: NA

Gene position: 1820769-1821311 (Clockwise)

Preceding gene: 115351696

Following gene: 115351700

Centisome position: 51.19

GC content: 66.11

Gene sequence:

>543_bases
ATGAAGAAAATCTCGCTCACCCTCGCGATGCTCGCCGTTGCAGCAGGCGCATTCGCACAAACGCCGCCGCAACCGCAAAC
GCCCGCCTCAACGACGGCAGCGGCAGCATCCGCGCCGAGCGCCGAACAGCGCGCGGCACGCCATGAAGCGCGCATCGAGC
AGCGCATCAAGTACCTGCACGATCAGCTGAAGATCACGTCGGCGCAGGAGTCGCAATGGAAGACGTTCGCCGACACGATG
CGCGAGAACGGTGAAACGATGGGCCATCTGTATCGCGCACGGATGGAAAACCGCAACGTGTCCGCGGTCGACGACATGAA
GCAGTACGCGGAACTCGCGCAGGCGAACGCGGACGGCGCGAAGAAGCTCGCCGACGCTTTCGCGCCGCTCTACCAGAGCT
TCCCGGCCGAACAGAAGGCGCTGGCCGACACGACGTTCCGCAGCTGGCTGCACCATGGCGGCGAACATCGCGGCTCGGGC
AAGGCCAAAAAGGAAGGCAAGGCAGCCGCCGCGCCGGCCGCCAGCGCGCCCGCGCAACCCTGA

Upstream 100 bases:

>100_bases
GTGACACGCAACGTGCTACTAATAGCAGGCGACGCGAGATGCGTGCTCGCGGCACAGGCCGCGGCGCCCGCTCGCACGAC
ACCACCCCGGAGAGCCAACC

Downstream 100 bases:

>100_bases
CGTCCGCCTCGCCGGCGCCGCGTTGCCCGGACGGGCGAACGGCGTCGCGCATCCCACGGGAATTCGGCGCGTCACACGGC
GCGCCGAATTCGGGATAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKKISLTLAMLAVAAGAFAQTPPQPQTPASTTAAAASAPSAEQRAARHEARIEQRIKYLHDQLKITSAQESQWKTFADTM
RENGETMGHLYRARMENRNVSAVDDMKQYAELAQANADGAKKLADAFAPLYQSFPAEQKALADTTFRSWLHHGGEHRGSG
KAKKEGKAAAAPAASAPAQP

Sequences:

>Translated_180_residues
MKKISLTLAMLAVAAGAFAQTPPQPQTPASTTAAAASAPSAEQRAARHEARIEQRIKYLHDQLKITSAQESQWKTFADTM
RENGETMGHLYRARMENRNVSAVDDMKQYAELAQANADGAKKLADAFAPLYQSFPAEQKALADTTFRSWLHHGGEHRGSG
KAKKEGKAAAAPAASAPAQP
>Mature_180_residues
MKKISLTLAMLAVAAGAFAQTPPQPQTPASTTAAAASAPSAEQRAARHEARIEQRIKYLHDQLKITSAQESQWKTFADTM
RENGETMGHLYRARMENRNVSAVDDMKQYAELAQANADGAKKLADAFAPLYQSFPAEQKALADTTFRSWLHHGGEHRGSG
KAKKEGKAAAAPAASAPAQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19358; Mature: 19358

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKISLTLAMLAVAAGAFAQTPPQPQTPASTTAAAASAPSAEQRAARHEARIEQRIKYLH
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
DQLKITSAQESQWKTFADTMRENGETMGHLYRARMENRNVSAVDDMKQYAELAQANADGA
HHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHH
KKLADAFAPLYQSFPAEQKALADTTFRSWLHHGGEHRGSGKAKKEGKAAAAPAASAPAQP
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCCCCCCCCC
>Mature Secondary Structure
MKKISLTLAMLAVAAGAFAQTPPQPQTPASTTAAAASAPSAEQRAARHEARIEQRIKYLH
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
DQLKITSAQESQWKTFADTMRENGETMGHLYRARMENRNVSAVDDMKQYAELAQANADGA
HHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHH
KKLADAFAPLYQSFPAEQKALADTTFRSWLHHGGEHRGSGKAKKEGKAAAAPAASAPAQP
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA