Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351696

Identifier: 115351696

GI number: 115351696

Start: 1817480

End: 1818226

Strand: Direct

Name: 115351696

Synonym: Bamb_1644

Alternate gene names: NA

Gene position: 1817480-1818226 (Clockwise)

Preceding gene: 115351694

Following gene: 115351699

Centisome position: 51.1

GC content: 68.94

Gene sequence:

>747_bases
GTGGATCCTCGGCATCGGCGTGGCGCTCGGCTTCGGCATCATCAACGTGATGTGGCTCGAGGCGGAAGTGTTCCCGCGCG
ACGACAAGCGCACCGACGCGTCGCGCGCGGGCTCGGGGAGCCGGTATTCGTGACGCACCTGGTGTTCTTCTGCGGTCATG
CCGGCACCGGCAAGACCACGCTCGCGAAGCGGCTGATCGGGCCGCTGATGCGCGCGACCGGCGAAGCCTTCTGCCTGCTC
GACAAGGACACGCTCTACGGCCGCTACAGCTCGGCCGCGATGGGCGCCCTCACCTCCGATCCGAACGATCGCGACAGCCC
GCTCTACCTGAAGCATCTGCGCGATCCCGAATATCAGGGCCTGCTCGACACGGCCCGCGAGAATCTCGCGCTCGGCATCG
GCGCGCTCGTGGTCGGCCCGCTGTCGCGCGAAGTGCGTGACCGGCGCATCCTCGACCGCGCGTGGCTCGGCATCGGGCCG
GAGATCGCGCTGACGGTCGTCTGGGTGCATACGGCGGAAGACGTCGCGCACCAGCGGATCGTCGCGCGCGGCAACCCGAA
CGACGCATACAAGCTCGCGCACTGGGACGAATACCGGCAACGCCGCTTCGTGCCGACCGGCCACGAATGCGACGGCATCG
TGATGTTCGACAATACCGCGCCGTCCGACGCGGACATCGATGCGCTGCTGTACCGCATCGTGCCGCCGGCGCCGCAGGCA
ACGATGGTCCCGCCGCTGCCCGCCTGA

Upstream 100 bases:

>100_bases
GCTGCCTGCGCCGCGGCACGCGCGCGGCACCGCTTCGGCAAACGCACGGCACGGCCGCGCGGCCCAACCATCAAGGAGAC
AGACCCATGTGGTATTTCTC

Downstream 100 bases:

>100_bases
GCCGCACACGCACCACCCTGCTCCTGCCTGCTTCGACCAGCCTCAAAAAAAACGCCGGAAGCGCTGTTGCGCTCCCGGCG
TTGCACGGCCCTCGTGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: P-Loop ATPase Protein; ATP-Ase; Shikimate Kinase; Transcriptional Regulator

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MDPRHRRGARLRHHQRDVARGGSVPARRQAHRRVARGLGEPVFVTHLVFFCGHAGTGKTTLAKRLIGPLMRATGEAFCLL
DKDTLYGRYSSAAMGALTSDPNDRDSPLYLKHLRDPEYQGLLDTARENLALGIGALVVGPLSREVRDRRILDRAWLGIGP
EIALTVVWVHTAEDVAHQRIVARGNPNDAYKLAHWDEYRQRRFVPTGHECDGIVMFDNTAPSDADIDALLYRIVPPAPQA
TMVPPLPA

Sequences:

>Translated_248_residues
MDPRHRRGARLRHHQRDVARGGSVPARRQAHRRVARGLGEPVFVTHLVFFCGHAGTGKTTLAKRLIGPLMRATGEAFCLL
DKDTLYGRYSSAAMGALTSDPNDRDSPLYLKHLRDPEYQGLLDTARENLALGIGALVVGPLSREVRDRRILDRAWLGIGP
EIALTVVWVHTAEDVAHQRIVARGNPNDAYKLAHWDEYRQRRFVPTGHECDGIVMFDNTAPSDADIDALLYRIVPPAPQA
TMVPPLPA
>Mature_248_residues
MDPRHRRGARLRHHQRDVARGGSVPARRQAHRRVARGLGEPVFVTHLVFFCGHAGTGKTTLAKRLIGPLMRATGEAFCLL
DKDTLYGRYSSAAMGALTSDPNDRDSPLYLKHLRDPEYQGLLDTARENLALGIGALVVGPLSREVRDRRILDRAWLGIGP
EIALTVVWVHTAEDVAHQRIVARGNPNDAYKLAHWDEYRQRRFVPTGHECDGIVMFDNTAPSDADIDALLYRIVPPAPQA
TMVPPLPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27540; Mature: 27540

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPRHRRGARLRHHQRDVARGGSVPARRQAHRRVARGLGEPVFVTHLVFFCGHAGTGKTT
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHH
LAKRLIGPLMRATGEAFCLLDKDTLYGRYSSAAMGALTSDPNDRDSPLYLKHLRDPEYQG
HHHHHHHHHHHHCCCEEEEEECCHHCCCHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHH
LLDTARENLALGIGALVVGPLSREVRDRRILDRAWLGIGPEIALTVVWVHTAEDVAHQRI
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHH
VARGNPNDAYKLAHWDEYRQRRFVPTGHECDGIVMFDNTAPSDADIDALLYRIVPPAPQA
HHCCCCCCCEECHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCC
TMVPPLPA
CCCCCCCC
>Mature Secondary Structure
MDPRHRRGARLRHHQRDVARGGSVPARRQAHRRVARGLGEPVFVTHLVFFCGHAGTGKTT
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHH
LAKRLIGPLMRATGEAFCLLDKDTLYGRYSSAAMGALTSDPNDRDSPLYLKHLRDPEYQG
HHHHHHHHHHHHCCCEEEEEECCHHCCCHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHH
LLDTARENLALGIGALVVGPLSREVRDRRILDRAWLGIGPEIALTVVWVHTAEDVAHQRI
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHH
VARGNPNDAYKLAHWDEYRQRRFVPTGHECDGIVMFDNTAPSDADIDALLYRIVPPAPQA
HHCCCCCCCEECHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCC
TMVPPLPA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA