| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351694
Identifier: 115351694
GI number: 115351694
Start: 1816012
End: 1816299
Strand: Direct
Name: 115351694
Synonym: Bamb_1642
Alternate gene names: NA
Gene position: 1816012-1816299 (Clockwise)
Preceding gene: 115351692
Following gene: 115351696
Centisome position: 51.06
GC content: 67.71
Gene sequence:
>288_bases ATGCATTACCAGCTGATCTACGAACTCGTCGACGATTACCTGTCCCGGCGCGAGCAATACCGCGCCGAGCACCTCGCGCT TGCGAAGGCGGCAACCGAACGCGGCGAGCTCGTGCTCGCCGGCGCGTTGCAGGATCCGTCCGATCAGGCCGTGCTCGTGT TCGAAGGCGATTCGCCGGAGGCCGCCGAATCGTTCGCGCGCGCCGATCCGTACGTGCAGAACGGCCTCGTCAAGTCGTGG CGCGTGCGGCCGTGGCGCGTCGTGGTCGGCAAGCACGCGCCGCACTAG
Upstream 100 bases:
>100_bases AGCGGCAAGCCGCTGCAAGCCGCCCCGACAAAGCCCGAATCGCGCCCTATACTGAGCCCAAGCGCCCGCCATCCCGCGGC GGCCGATTCCGGGAGCGACC
Downstream 100 bases:
>100_bases CCATCGCGGCTACAGCCACCCCGCCCGCCTGAAGCGCCACCACAGCGCGAGATCGGCCGCGACCATCACCGCGATGCAGC CGTAGAAGCCGTACTTGAGG
Product: YciI-like protein
Products: NA
Alternate protein names: YCII-Related Protein; Ycii-Related Protein; YCII-Related Domain Superfamily Protein; YCII-Related
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MHYQLIYELVDDYLSRREQYRAEHLALAKAATERGELVLAGALQDPSDQAVLVFEGDSPEAAESFARADPYVQNGLVKSW RVRPWRVVVGKHAPH
Sequences:
>Translated_95_residues MHYQLIYELVDDYLSRREQYRAEHLALAKAATERGELVLAGALQDPSDQAVLVFEGDSPEAAESFARADPYVQNGLVKSW RVRPWRVVVGKHAPH >Mature_95_residues MHYQLIYELVDDYLSRREQYRAEHLALAKAATERGELVLAGALQDPSDQAVLVFEGDSPEAAESFARADPYVQNGLVKSW RVRPWRVVVGKHAPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10760; Mature: 10760
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYQLIYELVDDYLSRREQYRAEHLALAKAATERGELVLAGALQDPSDQAVLVFEGDSPE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCH AAESFARADPYVQNGLVKSWRVRPWRVVVGKHAPH HHHHHHHCCCHHHCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MHYQLIYELVDDYLSRREQYRAEHLALAKAATERGELVLAGALQDPSDQAVLVFEGDSPE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCH AAESFARADPYVQNGLVKSWRVRPWRVVVGKHAPH HHHHHHHCCCHHHCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA