Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351694

Identifier: 115351694

GI number: 115351694

Start: 1816012

End: 1816299

Strand: Direct

Name: 115351694

Synonym: Bamb_1642

Alternate gene names: NA

Gene position: 1816012-1816299 (Clockwise)

Preceding gene: 115351692

Following gene: 115351696

Centisome position: 51.06

GC content: 67.71

Gene sequence:

>288_bases
ATGCATTACCAGCTGATCTACGAACTCGTCGACGATTACCTGTCCCGGCGCGAGCAATACCGCGCCGAGCACCTCGCGCT
TGCGAAGGCGGCAACCGAACGCGGCGAGCTCGTGCTCGCCGGCGCGTTGCAGGATCCGTCCGATCAGGCCGTGCTCGTGT
TCGAAGGCGATTCGCCGGAGGCCGCCGAATCGTTCGCGCGCGCCGATCCGTACGTGCAGAACGGCCTCGTCAAGTCGTGG
CGCGTGCGGCCGTGGCGCGTCGTGGTCGGCAAGCACGCGCCGCACTAG

Upstream 100 bases:

>100_bases
AGCGGCAAGCCGCTGCAAGCCGCCCCGACAAAGCCCGAATCGCGCCCTATACTGAGCCCAAGCGCCCGCCATCCCGCGGC
GGCCGATTCCGGGAGCGACC

Downstream 100 bases:

>100_bases
CCATCGCGGCTACAGCCACCCCGCCCGCCTGAAGCGCCACCACAGCGCGAGATCGGCCGCGACCATCACCGCGATGCAGC
CGTAGAAGCCGTACTTGAGG

Product: YciI-like protein

Products: NA

Alternate protein names: YCII-Related Protein; Ycii-Related Protein; YCII-Related Domain Superfamily Protein; YCII-Related

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MHYQLIYELVDDYLSRREQYRAEHLALAKAATERGELVLAGALQDPSDQAVLVFEGDSPEAAESFARADPYVQNGLVKSW
RVRPWRVVVGKHAPH

Sequences:

>Translated_95_residues
MHYQLIYELVDDYLSRREQYRAEHLALAKAATERGELVLAGALQDPSDQAVLVFEGDSPEAAESFARADPYVQNGLVKSW
RVRPWRVVVGKHAPH
>Mature_95_residues
MHYQLIYELVDDYLSRREQYRAEHLALAKAATERGELVLAGALQDPSDQAVLVFEGDSPEAAESFARADPYVQNGLVKSW
RVRPWRVVVGKHAPH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10760; Mature: 10760

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYQLIYELVDDYLSRREQYRAEHLALAKAATERGELVLAGALQDPSDQAVLVFEGDSPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCH
AAESFARADPYVQNGLVKSWRVRPWRVVVGKHAPH
HHHHHHHCCCHHHCCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MHYQLIYELVDDYLSRREQYRAEHLALAKAATERGELVLAGALQDPSDQAVLVFEGDSPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCH
AAESFARADPYVQNGLVKSWRVRPWRVVVGKHAPH
HHHHHHHCCCHHHCCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA