Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351660

Identifier: 115351660

GI number: 115351660

Start: 1784060

End: 1784431

Strand: Direct

Name: 115351660

Synonym: Bamb_1607

Alternate gene names: NA

Gene position: 1784060-1784431 (Clockwise)

Preceding gene: 115351659

Following gene: 115351661

Centisome position: 50.16

GC content: 64.52

Gene sequence:

>372_bases
ATGTCTGCTACATGGTTCAACGGATCCTGCCATTGCGGCGCGGTGAAATTCGAAGTCCGGGCGGCGCTTGCGCCGGCGAC
CCGCTGCAACTGCAGCCTCTGCCGCCGTCGCGGCGCGCTGATGAGCCCGATGTTCGATGCAAGCGAACTGAAGATCGTCG
CAGGCGAGAGCGCGTTGACCAGCTACCGGTTCAACACGCACACGGCACACCACTTTTTCTGCAGCCGGTGCGGGATCTAC
CCGTTCCACCAGACGCGCAAGGATCCCGCGTGCTGGCGGGTCAATCTCGGCTGCCTCGAGGGTGTCGATCCGTACGCGCT
CGAAGCGACGGTCGCCGACGGTGCGAGCCTTTCCGTCGTGGAGGACGCATGA

Upstream 100 bases:

>100_bases
TTGCAATGTTCTGTATCCGAGCGCCGCACGGATACAACGCGATACAAAGCATGGGCCCCGACCCGCTATAAAGCAGACAT
GATCTCCTGAGGAGCACGAC

Downstream 100 bases:

>100_bases
AACGCTGGCTGATGATCCTGCTGTTCGCCGCGGGCGGACTCGCGACCGAAATCGCCCATCCGGTGCAGTGTTCGCTGCTG
TCGATCAGCCGGCAGCGGGT

Product: glutathione-dependent formaldehyde-activating protein

Products: NA

Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein; Plasmid PRiA4b ORF-3 Family Protein; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Family; Inner Membrane Protein; Gfa-Like Protein; Glutathione-Dependent Formaldehyde-Activating Protein Gfa

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MSATWFNGSCHCGAVKFEVRAALAPATRCNCSLCRRRGALMSPMFDASELKIVAGESALTSYRFNTHTAHHFFCSRCGIY
PFHQTRKDPACWRVNLGCLEGVDPYALEATVADGASLSVVEDA

Sequences:

>Translated_123_residues
MSATWFNGSCHCGAVKFEVRAALAPATRCNCSLCRRRGALMSPMFDASELKIVAGESALTSYRFNTHTAHHFFCSRCGIY
PFHQTRKDPACWRVNLGCLEGVDPYALEATVADGASLSVVEDA
>Mature_122_residues
SATWFNGSCHCGAVKFEVRAALAPATRCNCSLCRRRGALMSPMFDASELKIVAGESALTSYRFNTHTAHHFFCSRCGIYP
FHQTRKDPACWRVNLGCLEGVDPYALEATVADGASLSVVEDA

Specific function: Unknown

COG id: COG3791

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI56118234, Length=94, Percent_Identity=41.4893617021277, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25149380, Length=117, Percent_Identity=34.1880341880342, Blast_Score=72, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI25149382, Length=90, Percent_Identity=40, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13409; Mature: 13278

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
7.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATWFNGSCHCGAVKFEVRAALAPATRCNCSLCRRRGALMSPMFDASELKIVAGESALT
CCCEECCCCCCCCEEEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCE
SYRFNTHTAHHFFCSRCGIYPFHQTRKDPACWRVNLGCLEGVDPYALEATVADGASLSVV
EEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEEE
EDA
ECC
>Mature Secondary Structure 
SATWFNGSCHCGAVKFEVRAALAPATRCNCSLCRRRGALMSPMFDASELKIVAGESALT
CCEECCCCCCCCEEEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCE
SYRFNTHTAHHFFCSRCGIYPFHQTRKDPACWRVNLGCLEGVDPYALEATVADGASLSVV
EEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEEE
EDA
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA