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The map label for this gene is ohrR [H]

Identifier: 115351661

GI number: 115351661

Start: 1784696

End: 1785151

Strand: Direct

Name: ohrR [H]

Synonym: Bamb_1608

Alternate gene names: 115351661

Gene position: 1784696-1785151 (Clockwise)

Preceding gene: 115351660

Following gene: 115351667

Centisome position: 50.18

GC content: 59.87

Gene sequence:

>456_bases
ATGAAACCGACCGACGCACCATCGCCCGCCACGCCGAAACTGTCCGAGTTCCTGTGCTTTGCGATCTACTCGACGAACCT
CGCGTTCGGCAAGGCATACAAGCCGATCTTGGAAGAGCTTGGCCTCACGTACACGCAATACATCACGATCATTGCGCTAT
GGGAGGAGGACAACCAGACGGTCGGGCAACTCGGCGAAAAGCTGTTCCTCGAATCGAACACGTTGACGCCGATCCTGAAG
AAACTCGAGGCGATGGGCTATCTGGAGCGGCACCGCGATCCGTCGGACGAGCGCCAGGTGCTCGTGAGCCTGACGAAAGG
CGGCCGCCGCGTGCGCGAGAAGGGGCTCGACATGGATCTCGTCGAAGCCACCGGGTTGAAGCCCGACGAATTCGCGAAGA
TGCAGAAGGCGATCGTCACGCTGCGCGGCAACCTGATCGATTCGATCGACGAATAG

Upstream 100 bases:

>100_bases
ACGCTGTTGATCGGAAACGATAATCATGCTTCCGATAAGATCGCACGCGATATATAATCGGTTCATCTGCGACACGATCC
CGTGTCGAGGGAGGACGCTC

Downstream 100 bases:

>100_bases
ACACGAATAGACACGAGCCGGCGGCGCACCTGCCGCCGGCCATTGCCGAAATTTCCGCAATTTCCACAAACGTCCGGCGA
TCGCGGCCGCCGCGACCAGG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKPTDAPSPATPKLSEFLCFAIYSTNLAFGKAYKPILEELGLTYTQYITIIALWEEDNQTVGQLGEKLFLESNTLTPILK
KLEAMGYLERHRDPSDERQVLVSLTKGGRRVREKGLDMDLVEATGLKPDEFAKMQKAIVTLRGNLIDSIDE

Sequences:

>Translated_151_residues
MKPTDAPSPATPKLSEFLCFAIYSTNLAFGKAYKPILEELGLTYTQYITIIALWEEDNQTVGQLGEKLFLESNTLTPILK
KLEAMGYLERHRDPSDERQVLVSLTKGGRRVREKGLDMDLVEATGLKPDEFAKMQKAIVTLRGNLIDSIDE
>Mature_151_residues
MKPTDAPSPATPKLSEFLCFAIYSTNLAFGKAYKPILEELGLTYTQYITIIALWEEDNQTVGQLGEKLFLESNTLTPILK
KLEAMGYLERHRDPSDERQVLVSLTKGGRRVREKGLDMDLVEATGLKPDEFAKMQKAIVTLRGNLIDSIDE

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16964; Mature: 16964

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTDAPSPATPKLSEFLCFAIYSTNLAFGKAYKPILEELGLTYTQYITIIALWEEDNQT
CCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHEEEEEEECCCCCH
VGQLGEKLFLESNTLTPILKKLEAMGYLERHRDPSDERQVLVSLTKGGRRVREKGLDMDL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHCCCCEEH
VEATGLKPDEFAKMQKAIVTLRGNLIDSIDE
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKPTDAPSPATPKLSEFLCFAIYSTNLAFGKAYKPILEELGLTYTQYITIIALWEEDNQT
CCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHEEEEEEECCCCCH
VGQLGEKLFLESNTLTPILKKLEAMGYLERHRDPSDERQVLVSLTKGGRRVREKGLDMDL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHCCCCEEH
VEATGLKPDEFAKMQKAIVTLRGNLIDSIDE
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]