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The map label for this gene is modB [H]

Identifier: 115351646

GI number: 115351646

Start: 1763891

End: 1764814

Strand: Direct

Name: modB [H]

Synonym: Bamb_1593

Alternate gene names: 115351646

Gene position: 1763891-1764814 (Clockwise)

Preceding gene: 115351645

Following gene: 115351647

Centisome position: 49.6

GC content: 67.75

Gene sequence:

>924_bases
ATGGCGACCGACAATCATGCCGCGCCGGCCTGGCCGCCGAAGCAGGGCGCGCCCGATGCGCGCCCCGTCAACGCGAGGAC
ACCGCAGAAGATGAGAAGCAACCTCGCCGGCCGGGCATGGAAGGCCCTCGTGTGGGGGCTGATGGCGTTCTTCCTGCTGA
ACGTGATGCTGCTGATCGCGACCGTCGCGGTGAACTCGGTCGCGACGCGCTGGTTCGGCACGCCGCTGCCGCAGGGCTTC
ACGCTGCACTGGTACGCGAAGGCATGGGAAGACTTCCAGCTCGCGAGCGTGCTGTGGGTGACGGTCGAAGTGGTTGGCGC
GGTCGTGCTGCTGTCGGTCGCGCTCGGCGTGCCGGCCGCCTATGCGCTCGCGCGCGTGCGGTTTCGCGGCAAGCGCTTCG
CGCTGCTGGTGTTCCTGCTGCCGCTGATGGTGCCGCCCGTCACGTACGGGATCCCGATGGCGACCGTGATGTACAAGGTC
GGGCTCGCCGGCACGCTGTCGGGCGTGATCCTCGCGAACCTCGTGCCGGCGCTGCCGTTCGTGATCCTCGTGATGACGCC
GTTCATCGAGCAGATCGACCCGAATCTCGAGGCCGCCGCGCGCATCTTCGGCGCGAACACGTGGCGCTATTTCCGCTACG
TGCTGCTGCCGCTGCTGGTGCCCGGCATGCTCGCGGCCGCGCTGCTCGTGCTGGTGCGCACGATCGGGATGTTCGAGCTG
ACCTTCTTCACCGCCGGCCCGAGCACGCAGACGCTCGTCGTCGCGCTGTATTACGCGGTGTTCTCGACCGGCGTGCGCGC
ACCGCAGTCGATCGACGCGATGGCGATGATCTACATGGCCATCACGCTGATATGGGTCGTGATCGCGCTGCAGTTCGTGA
GCCCGACGCAGCTCGTCAGCCGCGTGAAGCAGGAGCGGCAGTAA

Upstream 100 bases:

>100_bases
TCGCGATCGTGATGGGCTTCGTGCAACTGCTGGTGGTCGCGTCGATGCTCGGCGCGCGCCGCTTCTTCTATACGGGGCCG
GTGACAGGGGGCAAGGGCTG

Downstream 100 bases:

>100_bases
GCGCGGAGGAAAGCGGCGGGATCGCACCGTGCGGTGCTGTCCGTGCTTGCGCAAGCCTGCGTGCAATTCGTTACAAATGG
ATACCGCGAACGACGCGCCG

Product: binding-protein-dependent transport systems inner membrane component

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MATDNHAAPAWPPKQGAPDARPVNARTPQKMRSNLAGRAWKALVWGLMAFFLLNVMLLIATVAVNSVATRWFGTPLPQGF
TLHWYAKAWEDFQLASVLWVTVEVVGAVVLLSVALGVPAAYALARVRFRGKRFALLVFLLPLMVPPVTYGIPMATVMYKV
GLAGTLSGVILANLVPALPFVILVMTPFIEQIDPNLEAAARIFGANTWRYFRYVLLPLLVPGMLAAALLVLVRTIGMFEL
TFFTAGPSTQTLVVALYYAVFSTGVRAPQSIDAMAMIYMAITLIWVVIALQFVSPTQLVSRVKQERQ

Sequences:

>Translated_307_residues
MATDNHAAPAWPPKQGAPDARPVNARTPQKMRSNLAGRAWKALVWGLMAFFLLNVMLLIATVAVNSVATRWFGTPLPQGF
TLHWYAKAWEDFQLASVLWVTVEVVGAVVLLSVALGVPAAYALARVRFRGKRFALLVFLLPLMVPPVTYGIPMATVMYKV
GLAGTLSGVILANLVPALPFVILVMTPFIEQIDPNLEAAARIFGANTWRYFRYVLLPLLVPGMLAAALLVLVRTIGMFEL
TFFTAGPSTQTLVVALYYAVFSTGVRAPQSIDAMAMIYMAITLIWVVIALQFVSPTQLVSRVKQERQ
>Mature_306_residues
ATDNHAAPAWPPKQGAPDARPVNARTPQKMRSNLAGRAWKALVWGLMAFFLLNVMLLIATVAVNSVATRWFGTPLPQGFT
LHWYAKAWEDFQLASVLWVTVEVVGAVVLLSVALGVPAAYALARVRFRGKRFALLVFLLPLMVPPVTYGIPMATVMYKVG
LAGTLSGVILANLVPALPFVILVMTPFIEQIDPNLEAAARIFGANTWRYFRYVLLPLLVPGMLAAALLVLVRTIGMFELT
FFTAGPSTQTLVVALYYAVFSTGVRAPQSIDAMAMIYMAITLIWVVIALQFVSPTQLVSRVKQERQ

Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=244, Percent_Identity=27.0491803278689, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788764, Length=144, Percent_Identity=29.8611111111111, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790464, Length=130, Percent_Identity=36.9230769230769, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1787714, Length=206, Percent_Identity=29.126213592233, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR011867 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33647; Mature: 33516

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATDNHAAPAWPPKQGAPDARPVNARTPQKMRSNLAGRAWKALVWGLMAFFLLNVMLLIA
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVAVNSVATRWFGTPLPQGFTLHWYAKAWEDFQLASVLWVTVEVVGAVVLLSVALGVPAA
HHHHHHHHHHHCCCCCCCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
YALARVRFRGKRFALLVFLLPLMVPPVTYGIPMATVMYKVGLAGTLSGVILANLVPALPF
HHHHHHHHCCHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VILVMTPFIEQIDPNLEAAARIFGANTWRYFRYVLLPLLVPGMLAAALLVLVRTIGMFEL
HHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
TFFTAGPSTQTLVVALYYAVFSTGVRAPQSIDAMAMIYMAITLIWVVIALQFVSPTQLVS
EEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
RVKQERQ
HHHHHCC
>Mature Secondary Structure 
ATDNHAAPAWPPKQGAPDARPVNARTPQKMRSNLAGRAWKALVWGLMAFFLLNVMLLIA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVAVNSVATRWFGTPLPQGFTLHWYAKAWEDFQLASVLWVTVEVVGAVVLLSVALGVPAA
HHHHHHHHHHHCCCCCCCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
YALARVRFRGKRFALLVFLLPLMVPPVTYGIPMATVMYKVGLAGTLSGVILANLVPALPF
HHHHHHHHCCHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VILVMTPFIEQIDPNLEAAARIFGANTWRYFRYVLLPLLVPGMLAAALLVLVRTIGMFEL
HHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
TFFTAGPSTQTLVVALYYAVFSTGVRAPQSIDAMAMIYMAITLIWVVIALQFVSPTQLVS
EEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
RVKQERQ
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]