Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351647

Identifier: 115351647

GI number: 115351647

Start: 1765005

End: 1765442

Strand: Direct

Name: 115351647

Synonym: Bamb_1594

Alternate gene names: NA

Gene position: 1765005-1765442 (Clockwise)

Preceding gene: 115351646

Following gene: 115351648

Centisome position: 49.63

GC content: 69.18

Gene sequence:

>438_bases
ATGAAGTTTCCCACGCTGCTGACGCTCGGCTGTGCGGCCACGCTGCTTGCCGCCTGCAACCTGCTCCACGATGGCCCCGG
CTCGAGCGACGTCGACGCCGCGGTGCGCCGCGCGCTCGAAGCGGAAAACCACGGCGGCCTGAACGCGCTGTTCGGCCAGC
CGCTGCCCGTGTCGGCCGACGTGATCTCCGCGAAGCCCGACGGCGACTGCAGGAAAATCCGCGAGCGCACTTACACGTGC
GATGTCGTGGTCACGTGGCGCAATACCGACTACGCGCCGTCGCGAGCGAACCTGACGTTCGTGCAGGCCGCCGATGGATC
GTGGCAGACCTCGGGCGTCGACGCCGCCATCGCGACCGGCGCCGCCAAATCGCTGATCGACAAGATCGGCAACGCATGGC
CCGGCAATGCGGCCAGCGGCGCATCGGCGCCGCGGTAA

Upstream 100 bases:

>100_bases
CGACGCGCCGACGTTGCAGACTACGCAGCGTACCGGCCCGGCGATATGCTCACTGGCATCGCCGCATGCCGCCCGACGCT
CACCCGATTCGCGGAGTTCC

Downstream 100 bases:

>100_bases
GTCGTCCATCGCGCCGGGTCGCATCTTCTCGCACCATCTCCCGAATTTTCCGATTCGCCGCCACGACGGGCTCCGGCGCG
CTCGAACCGGTTCCGGCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MKFPTLLTLGCAATLLAACNLLHDGPGSSDVDAAVRRALEAENHGGLNALFGQPLPVSADVISAKPDGDCRKIRERTYTC
DVVVTWRNTDYAPSRANLTFVQAADGSWQTSGVDAAIATGAAKSLIDKIGNAWPGNAASGASAPR

Sequences:

>Translated_145_residues
MKFPTLLTLGCAATLLAACNLLHDGPGSSDVDAAVRRALEAENHGGLNALFGQPLPVSADVISAKPDGDCRKIRERTYTC
DVVVTWRNTDYAPSRANLTFVQAADGSWQTSGVDAAIATGAAKSLIDKIGNAWPGNAASGASAPR
>Mature_145_residues
MKFPTLLTLGCAATLLAACNLLHDGPGSSDVDAAVRRALEAENHGGLNALFGQPLPVSADVISAKPDGDCRKIRERTYTC
DVVVTWRNTDYAPSRANLTFVQAADGSWQTSGVDAAIATGAAKSLIDKIGNAWPGNAASGASAPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14996; Mature: 14996

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFPTLLTLGCAATLLAACNLLHDGPGSSDVDAAVRRALEAENHGGLNALFGQPLPVSAD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCCE
VISAKPDGDCRKIRERTYTCDVVVTWRNTDYAPSRANLTFVQAADGSWQTSGVDAAIATG
EEECCCCCHHHHHHHCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH
AAKSLIDKIGNAWPGNAASGASAPR
HHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKFPTLLTLGCAATLLAACNLLHDGPGSSDVDAAVRRALEAENHGGLNALFGQPLPVSAD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCCE
VISAKPDGDCRKIRERTYTCDVVVTWRNTDYAPSRANLTFVQAADGSWQTSGVDAAIATG
EEECCCCCHHHHHHHCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH
AAKSLIDKIGNAWPGNAASGASAPR
HHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA