| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351647
Identifier: 115351647
GI number: 115351647
Start: 1765005
End: 1765442
Strand: Direct
Name: 115351647
Synonym: Bamb_1594
Alternate gene names: NA
Gene position: 1765005-1765442 (Clockwise)
Preceding gene: 115351646
Following gene: 115351648
Centisome position: 49.63
GC content: 69.18
Gene sequence:
>438_bases ATGAAGTTTCCCACGCTGCTGACGCTCGGCTGTGCGGCCACGCTGCTTGCCGCCTGCAACCTGCTCCACGATGGCCCCGG CTCGAGCGACGTCGACGCCGCGGTGCGCCGCGCGCTCGAAGCGGAAAACCACGGCGGCCTGAACGCGCTGTTCGGCCAGC CGCTGCCCGTGTCGGCCGACGTGATCTCCGCGAAGCCCGACGGCGACTGCAGGAAAATCCGCGAGCGCACTTACACGTGC GATGTCGTGGTCACGTGGCGCAATACCGACTACGCGCCGTCGCGAGCGAACCTGACGTTCGTGCAGGCCGCCGATGGATC GTGGCAGACCTCGGGCGTCGACGCCGCCATCGCGACCGGCGCCGCCAAATCGCTGATCGACAAGATCGGCAACGCATGGC CCGGCAATGCGGCCAGCGGCGCATCGGCGCCGCGGTAA
Upstream 100 bases:
>100_bases CGACGCGCCGACGTTGCAGACTACGCAGCGTACCGGCCCGGCGATATGCTCACTGGCATCGCCGCATGCCGCCCGACGCT CACCCGATTCGCGGAGTTCC
Downstream 100 bases:
>100_bases GTCGTCCATCGCGCCGGGTCGCATCTTCTCGCACCATCTCCCGAATTTTCCGATTCGCCGCCACGACGGGCTCCGGCGCG CTCGAACCGGTTCCGGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MKFPTLLTLGCAATLLAACNLLHDGPGSSDVDAAVRRALEAENHGGLNALFGQPLPVSADVISAKPDGDCRKIRERTYTC DVVVTWRNTDYAPSRANLTFVQAADGSWQTSGVDAAIATGAAKSLIDKIGNAWPGNAASGASAPR
Sequences:
>Translated_145_residues MKFPTLLTLGCAATLLAACNLLHDGPGSSDVDAAVRRALEAENHGGLNALFGQPLPVSADVISAKPDGDCRKIRERTYTC DVVVTWRNTDYAPSRANLTFVQAADGSWQTSGVDAAIATGAAKSLIDKIGNAWPGNAASGASAPR >Mature_145_residues MKFPTLLTLGCAATLLAACNLLHDGPGSSDVDAAVRRALEAENHGGLNALFGQPLPVSADVISAKPDGDCRKIRERTYTC DVVVTWRNTDYAPSRANLTFVQAADGSWQTSGVDAAIATGAAKSLIDKIGNAWPGNAASGASAPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14996; Mature: 14996
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFPTLLTLGCAATLLAACNLLHDGPGSSDVDAAVRRALEAENHGGLNALFGQPLPVSAD CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCCE VISAKPDGDCRKIRERTYTCDVVVTWRNTDYAPSRANLTFVQAADGSWQTSGVDAAIATG EEECCCCCHHHHHHHCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH AAKSLIDKIGNAWPGNAASGASAPR HHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKFPTLLTLGCAATLLAACNLLHDGPGSSDVDAAVRRALEAENHGGLNALFGQPLPVSAD CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCCE VISAKPDGDCRKIRERTYTCDVVVTWRNTDYAPSRANLTFVQAADGSWQTSGVDAAIATG EEECCCCCHHHHHHHCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH AAKSLIDKIGNAWPGNAASGASAPR HHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA