| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is tauD [H]
Identifier: 115351639
GI number: 115351639
Start: 1756263
End: 1757111
Strand: Direct
Name: tauD [H]
Synonym: Bamb_1586
Alternate gene names: 115351639
Gene position: 1756263-1757111 (Clockwise)
Preceding gene: 115351638
Following gene: 115351640
Centisome position: 49.38
GC content: 67.73
Gene sequence:
>849_bases ATGCGAGTCGAACCCCTGACCTGTGCGATCGGCGCGGAACTGCTGGACGTGAGCCTCGCCGACGCCGTGCACGACGACGG CCTGTTCGCCGAGATCCGCGCGCAGTTGCTGCGCCATCGCGTGCTGTTCCTGCGCGACCAGGACATCACGCGTGCCGAGC ATGTCGCGTTCGCGCGCCGCTTCGGCGAGCTCGAGGATCATCCGGTCGCCGGCAGCGACCCTGAGCATCCGGGGCTCGTG CGGATCTACAAGTCGCCCGACCAGCCGAACGACCGCTACGAGAATGCGTGGCACAGCGATGCGAGCTGGCGCGTGGCGCC GCCGTTCGGCTGTGTGCTGCGCTGCATCGACGGTCCGCCGGTTGGCGGCGACACGATGTGGGCGAACATGGTGCTCGCGT ACGAGAACCTGCCGGACCACGTGAAGCAGCAGATCGCGGACCTGCGCGCCCGCCACAGCATCGAGGCGAGCTTCGGCGCG GCGATGCCGATCGACAAGCGCCTCGCGTTGAAGGCGCAGTATCCGGACGCCGAGCATCCGGTCGTGCGCACGCATCCCGA AACGGGCGAGAAGGTGCTGTACGTAAATGCGTTCACCACGCATTTCACCAACTTCCACACCCCCGCGCGCGTGCGCGTCG GGCAGGACGCGAATCCTGGCGCCGGCCAGCTGCTGCACTACCTGATCAGCCAGGCGGCGATCCCCGAATACCAGGTGCGC TGGCGCTGGAAAAAGAACAGCGTCGCGATCTGGGACAACCGCGCCACCCAGCATTACGCGGTGATGGACTACCCGCCGTG CGTGCGCCGGATGGAGCGCGCGGGCATCGTTGGCGACGTGCCGTTCTGA
Upstream 100 bases:
>100_bases AACCAGCGCTATGCGCTGCAGGACGCGGCGCAGGCGCACCGCGACCTCGAGTCGCGCAAGACGACCGGCTCGTCGGTATT CATCGTCTGAGGAGACGCGC
Downstream 100 bases:
>100_bases GCACGCGCGCACCGTAACCGATCCACGACCGATACAACGCGCCGGGTTCGCCGCCCGGCGCGACGGGATACGCACGCCCG TACGCCCGAACACAACGATT
Product: taurine dioxygenase
Products: NA
Alternate protein names: 2-aminoethanesulfonate dioxygenase; Sulfate starvation-induced protein 3; SSI3 [H]
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MRVEPLTCAIGAELLDVSLADAVHDDGLFAEIRAQLLRHRVLFLRDQDITRAEHVAFARRFGELEDHPVAGSDPEHPGLV RIYKSPDQPNDRYENAWHSDASWRVAPPFGCVLRCIDGPPVGGDTMWANMVLAYENLPDHVKQQIADLRARHSIEASFGA AMPIDKRLALKAQYPDAEHPVVRTHPETGEKVLYVNAFTTHFTNFHTPARVRVGQDANPGAGQLLHYLISQAAIPEYQVR WRWKKNSVAIWDNRATQHYAVMDYPPCVRRMERAGIVGDVPF
Sequences:
>Translated_282_residues MRVEPLTCAIGAELLDVSLADAVHDDGLFAEIRAQLLRHRVLFLRDQDITRAEHVAFARRFGELEDHPVAGSDPEHPGLV RIYKSPDQPNDRYENAWHSDASWRVAPPFGCVLRCIDGPPVGGDTMWANMVLAYENLPDHVKQQIADLRARHSIEASFGA AMPIDKRLALKAQYPDAEHPVVRTHPETGEKVLYVNAFTTHFTNFHTPARVRVGQDANPGAGQLLHYLISQAAIPEYQVR WRWKKNSVAIWDNRATQHYAVMDYPPCVRRMERAGIVGDVPF >Mature_282_residues MRVEPLTCAIGAELLDVSLADAVHDDGLFAEIRAQLLRHRVLFLRDQDITRAEHVAFARRFGELEDHPVAGSDPEHPGLV RIYKSPDQPNDRYENAWHSDASWRVAPPFGCVLRCIDGPPVGGDTMWANMVLAYENLPDHVKQQIADLRARHSIEASFGA AMPIDKRLALKAQYPDAEHPVVRTHPETGEKVLYVNAFTTHFTNFHTPARVRVGQDANPGAGQLLHYLISQAAIPEYQVR WRWKKNSVAIWDNRATQHYAVMDYPPCVRRMERAGIVGDVPF
Specific function: Catalyzes the conversion of taurine and alpha ketoglutarate to sulfite, aminoacetaldehyde and succinate. Required for the utilization of taurine (2-aminoethanesulfonic acid) as an alternative sulfur source. Pentane-sulfonic acid, 3- (N-morpholino)propanes
COG id: COG2175
COG function: function code Q; Probable taurine catabolism dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tfdA dioxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786565, Length=289, Percent_Identity=37.7162629757785, Blast_Score=181, Evalue=7e-47, Organism=Saccharomyces cerevisiae, GI6322971, Length=282, Percent_Identity=26.9503546099291, Blast_Score=104, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003819 [H]
Pfam domain/function: PF02668 TauD [H]
EC number: =1.14.11.17 [H]
Molecular weight: Translated: 31837; Mature: 31837
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVEPLTCAIGAELLDVSLADAVHDDGLFAEIRAQLLRHRVLFLRDQDITRAEHVAFARR CCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHH FGELEDHPVAGSDPEHPGLVRIYKSPDQPNDRYENAWHSDASWRVAPPFGCVLRCIDGPP HCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHCCCCCCCCCCEECCCHHHHEEECCCCC VGGDTMWANMVLAYENLPDHVKQQIADLRARHSIEASFGAAMPIDKRLALKAQYPDAEHP CCCCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCC VVRTHPETGEKVLYVNAFTTHFTNFHTPARVRVGQDANPGAGQLLHYLISQAAIPEYQVR EEEECCCCCCEEEEEEEHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE WRWKKNSVAIWDNRATQHYAVMDYPPCVRRMERAGIVGDVPF EEEECCCEEEEECCCCCEEEEECCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRVEPLTCAIGAELLDVSLADAVHDDGLFAEIRAQLLRHRVLFLRDQDITRAEHVAFARR CCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHH FGELEDHPVAGSDPEHPGLVRIYKSPDQPNDRYENAWHSDASWRVAPPFGCVLRCIDGPP HCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHCCCCCCCCCCEECCCHHHHEEECCCCC VGGDTMWANMVLAYENLPDHVKQQIADLRARHSIEASFGAAMPIDKRLALKAQYPDAEHP CCCCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCC VVRTHPETGEKVLYVNAFTTHFTNFHTPARVRVGQDANPGAGQLLHYLISQAAIPEYQVR EEEECCCCCCEEEEEEEHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE WRWKKNSVAIWDNRATQHYAVMDYPPCVRRMERAGIVGDVPF EEEECCCEEEEECCCCCEEEEECCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 2656410; 8774726; 7984428; 9287300; 11955067 [H]