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The map label for this gene is vagC [H]

Identifier: 115351597

GI number: 115351597

Start: 1711684

End: 1711950

Strand: Direct

Name: vagC [H]

Synonym: Bamb_1544

Alternate gene names: 115351597

Gene position: 1711684-1711950 (Clockwise)

Preceding gene: 115351596

Following gene: 115351598

Centisome position: 48.13

GC content: 64.79

Gene sequence:

>267_bases
ATGCGCACTGTTTCCATTTTCAAGAACGCCCGTAACCAGGCAATCCGCATCCCGAAGGACATGGAGTTCGAGGGTGTGAC
GGAACTCGAGATCCGCCGCGAGGGCGACACGTTGCTGCTGCGTCCGGTGCGGCCGACGTGGCTGTCGTTCGCGACTGAAC
CACGGGCCGATGCCGACTTCCTCGTCGAGCGCCCGACGGTCGTCGAAGCCGGTCGTTTCGAGCTGCCCGGCGCCGATGAC
GATGCACAGACGGAGTCGGCCCGGTGA

Upstream 100 bases:

>100_bases
CGCGATAGCATCGGGCGCGATCCCCGCAGCACGTTCCCCGACATTGACATATGCCGGCATATGCCTAAAATGGGCGCATC
GTACTCCTGTGGAGTGGCTT

Downstream 100 bases:

>100_bases
CGACGCTCTACATGCTCGATACGAACATCTGTTCGTTCATCATGCGCGAGCGGCCATCCGCGGTGTTGTCCCGGTTGCAG
TCGTGCGTCAATGCGCAGCA

Product: SpoVT/AbrB domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MRTVSIFKNARNQAIRIPKDMEFEGVTELEIRREGDTLLLRPVRPTWLSFATEPRADADFLVERPTVVEAGRFELPGADD
DAQTESAR

Sequences:

>Translated_88_residues
MRTVSIFKNARNQAIRIPKDMEFEGVTELEIRREGDTLLLRPVRPTWLSFATEPRADADFLVERPTVVEAGRFELPGADD
DAQTESAR
>Mature_88_residues
MRTVSIFKNARNQAIRIPKDMEFEGVTELEIRREGDTLLLRPVRPTWLSFATEPRADADFLVERPTVVEAGRFELPGADD
DAQTESAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the vapB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007159 [H]

Pfam domain/function: PF04014 SpoVT_AbrB [H]

EC number: NA

Molecular weight: Translated: 10017; Mature: 10017

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVSIFKNARNQAIRIPKDMEFEGVTELEIRREGDTLLLRPVRPTWLSFATEPRADADF
CCCHHCCCCCCCCEEECCCCCCCCCCEEEEEEECCCEEEEECCCCCEEEECCCCCCCCCE
LVERPTVVEAGRFELPGADDDAQTESAR
EECCCCEECCCCEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRTVSIFKNARNQAIRIPKDMEFEGVTELEIRREGDTLLLRPVRPTWLSFATEPRADADF
CCCHHCCCCCCCCEEECCCCCCCCCCEEEEEEECCCEEEEECCCCCEEEECCCCCCCCCE
LVERPTVVEAGRFELPGADDDAQTESAR
EECCCCEECCCCEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1495391 [H]