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The map label for this gene is 115351598

Identifier: 115351598

GI number: 115351598

Start: 1711947

End: 1712369

Strand: Direct

Name: 115351598

Synonym: Bamb_1545

Alternate gene names: NA

Gene position: 1711947-1712369 (Clockwise)

Preceding gene: 115351597

Following gene: 115351600

Centisome position: 48.14

GC content: 63.59

Gene sequence:

>423_bases
GTGACGACGCTCTACATGCTCGATACGAACATCTGTTCGTTCATCATGCGCGAGCGGCCATCCGCGGTGTTGTCCCGGTT
GCAGTCGTGCGTCAATGCGCAGCACCGGATCGTCGTGTCGGCGATCACCTATGCCGAGATGCGATTCGGCGCAGTCGGCA
GAAAGGCTTCGCCGAAGCATGCGGAACTCGTGACGGCCTTTGTTTCGCGGCTGGATGGCGTGCTGTCGTGGGATACCGCG
GCGGTCGATGCAACGACCGCGATTCGCGTCGACCTTGCCGCACGTGGCACGCCGATCGGCGCGAACGACGCGTCGATCGC
CGGTCACGCGATCGCGGCCGGTGCCGTGCTTGTAACGAACAACAGTCGCGAATTCAGCCGTGTCGCGGGGTTGTCGCTCG
AAGATTGGGCAGCCTCGGCCTAG

Upstream 100 bases:

>100_bases
GGGCCGATGCCGACTTCCTCGTCGAGCGCCCGACGGTCGTCGAAGCCGGTCGTTTCGAGCTGCCCGGCGCCGATGACGAT
GCACAGACGGAGTCGGCCCG

Downstream 100 bases:

>100_bases
GGCGGCGAATGCACGATGGCGGTGTTGTCGCGCGGCAGCGCGTTTGAGTGACCGCGGTGTTGCCCGGGCCGGGCGGGATT
CTACTCCGCGGTGAGTGATT

Product: PilT domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTTLYMLDTNICSFIMRERPSAVLSRLQSCVNAQHRIVVSAITYAEMRFGAVGRKASPKHAELVTAFVSRLDGVLSWDTA
AVDATTAIRVDLAARGTPIGANDASIAGHAIAAGAVLVTNNSREFSRVAGLSLEDWAASA

Sequences:

>Translated_140_residues
MTTLYMLDTNICSFIMRERPSAVLSRLQSCVNAQHRIVVSAITYAEMRFGAVGRKASPKHAELVTAFVSRLDGVLSWDTA
AVDATTAIRVDLAARGTPIGANDASIAGHAIAAGAVLVTNNSREFSRVAGLSLEDWAASA
>Mature_139_residues
TTLYMLDTNICSFIMRERPSAVLSRLQSCVNAQHRIVVSAITYAEMRFGAVGRKASPKHAELVTAFVSRLDGVLSWDTAA
VDATTAIRVDLAARGTPIGANDASIAGHAIAAGAVLVTNNSREFSRVAGLSLEDWAASA

Specific function: Unknown

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.nodosus virulence-associated protein C (vapC) [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 14807; Mature: 14676

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLYMLDTNICSFIMRERPSAVLSRLQSCVNAQHRIVVSAITYAEMRFGAVGRKASPKH
CCEEEEECHHHHHHHHHCCHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHCCCCCCCCCHH
AELVTAFVSRLDGVLSWDTAAVDATTAIRVDLAARGTPIGANDASIAGHAIAAGAVLVTN
HHHHHHHHHHHCCCCCCCCHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHCCEEEEEC
NSREFSRVAGLSLEDWAASA
CCHHHHHHHCCCHHHHCCCC
>Mature Secondary Structure 
TTLYMLDTNICSFIMRERPSAVLSRLQSCVNAQHRIVVSAITYAEMRFGAVGRKASPKH
CEEEEECHHHHHHHHHCCHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHCCCCCCCCCHH
AELVTAFVSRLDGVLSWDTAAVDATTAIRVDLAARGTPIGANDASIAGHAIAAGAVLVTN
HHHHHHHHHHHCCCCCCCCHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHCCEEEEEC
NSREFSRVAGLSLEDWAASA
CCHHHHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]