Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is iucB [H]

Identifier: 115351596

GI number: 115351596

Start: 1710390

End: 1711406

Strand: Direct

Name: iucB [H]

Synonym: Bamb_1543

Alternate gene names: 115351596

Gene position: 1710390-1711406 (Clockwise)

Preceding gene: 115351595

Following gene: 115351597

Centisome position: 48.09

GC content: 69.71

Gene sequence:

>1017_bases
ATGGAAGACACCCTCACGAAACCGGCCGGCCCGGCGGACGCCGTCGAAGGCGAGGTGGCCGCGGCGCTCGACGGCGCGGC
GCCCGCGCATGCGACGGCCGCCGCCGAGCGCACGCTCGACGCGTGGCGGCCTGACGATCCGCCGGCCGCGCTGCTCGCGG
AATTCGTCGCGCTGTTCAACACGGACACGCGGCACGACGCGGCGACGGTGTCGGTGCCGCTCGGCGGCGCCGGGCCGGCG
GCCGTCGCGTCGTACGTCGCGCGCGCGGTGCGCGAGGGCGTGATCGACGGCGCACAGGTCGCGGGCGACCGGCTGCGGCT
GAGCGCATCGCGCGCGACGTTCTGGCAGAACCCGCGGCCGTGGCTGAAGGCGCCTGCATCGGGCGGGATGCCGCTGCGCT
ACGCGATCACGAACGGCCACCGGCATCCGGTGCGGCCGCCGTCGCCGGCCGGCGAGATCTATGCGCGCTACATGCCGCAG
GTCGGGATGACGTTCAGCCTGCGCACCGTCGACATCGACGAGCATGCGCAGTTGTTCAGCGACTGGATGAACCTCGATCG
CGTCGCGCATTTCTGGGATCAGCGCGGCACGCGCGACGAGCACGCCGCGTATCTCGCGGAGCGGCTCGCCGATCCGCACA
TGCATCCGATGATCGGCTATTTCGACGACACGCCGTTCGGCTATTTCGAGTTCTACTGGGCGAAGGAGGACCGCCTCGCG
CCGTTCTACGACGCGCACGACTACGATCGCGGGCTGCATCTGCTGATCGGCGACTCGCGCTTCCAGAGCGCGGGCAAGCT
GCATGCATGGTGGAGCGGGGTGCTGCACTACATGTTCGTCGACGAACCGCGCACGCAGCGGCTCGTCGGCGAGCCGCGCG
TCGATCACGTGCGGCATATCGCGTACATGCATCGGCTCGGGTTCTACACGCTGAAGGAGTTCGACTTCCCGCACAAGCGG
GCGGCGCTCACCGTGATGGAGCGCGAAACGTTCTTTGACACTTTCCGGTTGCCGTGA

Upstream 100 bases:

>100_bases
TTCTCGAACTGCGCTGGAACAACTTCCAGCGCAGCCTGTTTCCGGCGCTCGAGCGGGGGCTGCACATCCTCGCCGACCGC
CACGACGCGGGAGCACTGTG

Downstream 100 bases:

>100_bases
TGGAGCGGGGGCGCGAAGCGTCGATGCGCCGATGCGTCAATTCGCAAGCGACGACGTTTCGCGCGGTCGAAGGGCCGCGG
ACATCGGCTGTTCGGGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MEDTLTKPAGPADAVEGEVAAALDGAAPAHATAAAERTLDAWRPDDPPAALLAEFVALFNTDTRHDAATVSVPLGGAGPA
AVASYVARAVREGVIDGAQVAGDRLRLSASRATFWQNPRPWLKAPASGGMPLRYAITNGHRHPVRPPSPAGEIYARYMPQ
VGMTFSLRTVDIDEHAQLFSDWMNLDRVAHFWDQRGTRDEHAAYLAERLADPHMHPMIGYFDDTPFGYFEFYWAKEDRLA
PFYDAHDYDRGLHLLIGDSRFQSAGKLHAWWSGVLHYMFVDEPRTQRLVGEPRVDHVRHIAYMHRLGFYTLKEFDFPHKR
AALTVMERETFFDTFRLP

Sequences:

>Translated_338_residues
MEDTLTKPAGPADAVEGEVAAALDGAAPAHATAAAERTLDAWRPDDPPAALLAEFVALFNTDTRHDAATVSVPLGGAGPA
AVASYVARAVREGVIDGAQVAGDRLRLSASRATFWQNPRPWLKAPASGGMPLRYAITNGHRHPVRPPSPAGEIYARYMPQ
VGMTFSLRTVDIDEHAQLFSDWMNLDRVAHFWDQRGTRDEHAAYLAERLADPHMHPMIGYFDDTPFGYFEFYWAKEDRLA
PFYDAHDYDRGLHLLIGDSRFQSAGKLHAWWSGVLHYMFVDEPRTQRLVGEPRVDHVRHIAYMHRLGFYTLKEFDFPHKR
AALTVMERETFFDTFRLP
>Mature_338_residues
MEDTLTKPAGPADAVEGEVAAALDGAAPAHATAAAERTLDAWRPDDPPAALLAEFVALFNTDTRHDAATVSVPLGGAGPA
AVASYVARAVREGVIDGAQVAGDRLRLSASRATFWQNPRPWLKAPASGGMPLRYAITNGHRHPVRPPSPAGEIYARYMPQ
VGMTFSLRTVDIDEHAQLFSDWMNLDRVAHFWDQRGTRDEHAAYLAERLADPHMHPMIGYFDDTPFGYFEFYWAKEDRLA
PFYDAHDYDRGLHLLIGDSRFQSAGKLHAWWSGVLHYMFVDEPRTQRLVGEPRVDHVRHIAYMHRLGFYTLKEFDFPHKR
AALTVMERETFFDTFRLP

Specific function: Unknown

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iucB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181
- InterPro:   IPR019432 [H]

Pfam domain/function: PF10331 AlcB [H]

EC number: NA

Molecular weight: Translated: 37969; Mature: 37969

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDTLTKPAGPADAVEGEVAAALDGAAPAHATAAAERTLDAWRPDDPPAALLAEFVALFN
CCCCCCCCCCCCHHHCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
TDTRHDAATVSVPLGGAGPAAVASYVARAVREGVIDGAQVAGDRLRLSASRATFWQNPRP
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEHHHHHHCCCCCC
WLKAPASGGMPLRYAITNGHRHPVRPPSPAGEIYARYMPQVGMTFSLRTVDIDEHAQLFS
HHCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHH
DWMNLDRVAHFWDQRGTRDEHAAYLAERLADPHMHPMIGYFDDTPFGYFEFYWAKEDRLA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
PFYDAHDYDRGLHLLIGDSRFQSAGKLHAWWSGVLHYMFVDEPRTQRLVGEPRVDHVRHI
CCCCCCCCCCCEEEEEECHHHHCCCCHHHHHHHHHHEEECCCCHHHHHCCCCCHHHHHHH
AYMHRLGFYTLKEFDFPHKRAALTVMERETFFDTFRLP
HHHHHHCCHHHHHCCCCCHHHHEEHHHHHHHHHHHCCC
>Mature Secondary Structure
MEDTLTKPAGPADAVEGEVAAALDGAAPAHATAAAERTLDAWRPDDPPAALLAEFVALFN
CCCCCCCCCCCCHHHCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
TDTRHDAATVSVPLGGAGPAAVASYVARAVREGVIDGAQVAGDRLRLSASRATFWQNPRP
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEHHHHHHCCCCCC
WLKAPASGGMPLRYAITNGHRHPVRPPSPAGEIYARYMPQVGMTFSLRTVDIDEHAQLFS
HHCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHH
DWMNLDRVAHFWDQRGTRDEHAAYLAERLADPHMHPMIGYFDDTPFGYFEFYWAKEDRLA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
PFYDAHDYDRGLHLLIGDSRFQSAGKLHAWWSGVLHYMFVDEPRTQRLVGEPRVDHVRHI
CCCCCCCCCCCEEEEEECHHHHCCCCHHHHHHHHHHEEECCCCHHHHHCCCCCHHHHHHH
AYMHRLGFYTLKEFDFPHKRAALTVMERETFFDTFRLP
HHHHHHCCHHHHHCCCCCHHHHEEHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8003107 [H]