Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351462

Identifier: 115351462

GI number: 115351462

Start: 1552806

End: 1553138

Strand: Direct

Name: 115351462

Synonym: Bamb_1409

Alternate gene names: NA

Gene position: 1552806-1553138 (Clockwise)

Preceding gene: 115351461

Following gene: 115351463

Centisome position: 43.66

GC content: 63.96

Gene sequence:

>333_bases
ATGACGAACGACAAACGTTTCAATCGACGCCTTGCAGGGCTGCATCGCGGCATCACAGTGGTTGCATTGCTGGGGGCCGC
GACTGCGGCACATTGCCAGGAGTCGATGCCGTCGGCGGCGGAAGTCGGCCATGCGACCGACGCGCTGCTCGCGCTGCAGC
GGGACAACCGTGCGGCCGGACCGGCGTTGCCGATGTTGGGTGATACCGCGTCGCTCAGCTACCAGCGCTATCTCGATTCG
TTCAAGCACAAGATTCCGGAGTCGATGGGGTCGCCGGTCAACGCGAACGGCAGCGGCGGGGCCGGCGGACAGCATTCCAT
GCAATCGTATTGA

Upstream 100 bases:

>100_bases
CGCGGCGGCCGTCGCCCGTCGCAAACATTCAGGGATTCGATCCCACCGCGCCGTTGCTGCAACGGTTCGCACAATGACAA
GGCATTCGGGGGGAAGTGAC

Downstream 100 bases:

>100_bases
GCGGGACGGTAATGATCGCGGCTCGCCATTCATCGAATCGAGTGACCGGACGGGGGCGCGCCGCGCCGCGGCGACAGCGC
GGCGCGGTCGTCGTCATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MTNDKRFNRRLAGLHRGITVVALLGAATAAHCQESMPSAAEVGHATDALLALQRDNRAAGPALPMLGDTASLSYQRYLDS
FKHKIPESMGSPVNANGSGGAGGQHSMQSY

Sequences:

>Translated_110_residues
MTNDKRFNRRLAGLHRGITVVALLGAATAAHCQESMPSAAEVGHATDALLALQRDNRAAGPALPMLGDTASLSYQRYLDS
FKHKIPESMGSPVNANGSGGAGGQHSMQSY
>Mature_109_residues
TNDKRFNRRLAGLHRGITVVALLGAATAAHCQESMPSAAEVGHATDALLALQRDNRAAGPALPMLGDTASLSYQRYLDSF
KHKIPESMGSPVNANGSGGAGGQHSMQSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11521; Mature: 11390

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNDKRFNRRLAGLHRGITVVALLGAATAAHCQESMPSAAEVGHATDALLALQRDNRAAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHCCCCCCC
PALPMLGDTASLSYQRYLDSFKHKIPESMGSPVNANGSGGAGGQHSMQSY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TNDKRFNRRLAGLHRGITVVALLGAATAAHCQESMPSAAEVGHATDALLALQRDNRAAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHCCCCCCC
PALPMLGDTASLSYQRYLDSFKHKIPESMGSPVNANGSGGAGGQHSMQSY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA