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The map label for this gene is 115351461

Identifier: 115351461

GI number: 115351461

Start: 1551895

End: 1552782

Strand: Direct

Name: 115351461

Synonym: Bamb_1408

Alternate gene names: NA

Gene position: 1551895-1552782 (Clockwise)

Preceding gene: 115351460

Following gene: 115351462

Centisome position: 43.63

GC content: 66.44

Gene sequence:

>888_bases
ATGAAACGCATCGATGAAGTCGCGAAAGTGGCCGGCATGGTGGCGATGGCTGGCCTGCTCTGCGCGTGTTCGGCGTTCAA
GGAAAGCGGGTACGGTGTTGGCCCGCAAGCCGAGCGTGCGGCATTGATGGACGCCGCGGCCCAGAAACAGTCAGCACCCG
ATACGCCCGGCATGTATCTGGGCCTGATCGAGCGGATGCAGTCGCAAGGACTGTATTACGCGTCGCTCGCGCATATCGAT
GCGTACGAGAAGCAGTACGGTGCGTCACCGCAGACCATCCTTCTGCGCGCCGATGCGTTGCGCATGACCGACCAGCCGGC
CGCGAGCACGGCTGTCTATACGCAACTGCTCAACACGCCGCTGGCGTCGCGCGGGTATCGCGGGCTGGGGCTGATCGCCG
GTGCGGCGGGCGATTTTCCGCGCGCCGCGCAGGCATTGGCGCAGGCGACGGTGCTGGCACCGACCGATGCCGCGACGCTG
TCGGATCTCGCCTACGCAAAATTGCGCGGCGGTGATATCGACGGTGCGCGCATCCCGTTGATGAAGGCGGCTGAACTCGA
CCAGAACAATCCAAAGATCATCAGCAACCTGGTGCTGTACCTGCTCGCGTCCGGCCGTGCGCGCGACGCGCAGCGGCTCA
TGGCACAGCAGAAGCTGTCGGCCGACGTGCGCAACGACATCCGCGGCGACGCGATGAAAATCACGGCGGCAGCGCGTGCG
TGGCGCCGCGCGGCACCGCCATCGGCCTCGGTCGCGACGGTGACGCCGGTCGGCTCGGGCAGCGTCGTCGACGTGTCGGG
CGCCGATGTCTCGCGGCGGCCGTCGCCCGTCGCAAACATTCAGGGATTCGATCCCACCGCGCCGTTGCTGCAACGGTTCG
CACAATGA

Upstream 100 bases:

>100_bases
GCCCGCGCTGCTGATCGTGACGGCCGGGCCGGGGATGATTTCGGTGTTGCGTGCGCTGAACCAGGCGCAGCACTGATGCA
GGGAAGGGAAAGGACGGAAA

Downstream 100 bases:

>100_bases
CAAGGCATTCGGGGGGAAGTGACATGACGAACGACAAACGTTTCAATCGACGCCTTGCAGGGCTGCATCGCGGCATCACA
GTGGTTGCATTGCTGGGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MKRIDEVAKVAGMVAMAGLLCACSAFKESGYGVGPQAERAALMDAAAQKQSAPDTPGMYLGLIERMQSQGLYYASLAHID
AYEKQYGASPQTILLRADALRMTDQPAASTAVYTQLLNTPLASRGYRGLGLIAGAAGDFPRAAQALAQATVLAPTDAATL
SDLAYAKLRGGDIDGARIPLMKAAELDQNNPKIISNLVLYLLASGRARDAQRLMAQQKLSADVRNDIRGDAMKITAAARA
WRRAAPPSASVATVTPVGSGSVVDVSGADVSRRPSPVANIQGFDPTAPLLQRFAQ

Sequences:

>Translated_295_residues
MKRIDEVAKVAGMVAMAGLLCACSAFKESGYGVGPQAERAALMDAAAQKQSAPDTPGMYLGLIERMQSQGLYYASLAHID
AYEKQYGASPQTILLRADALRMTDQPAASTAVYTQLLNTPLASRGYRGLGLIAGAAGDFPRAAQALAQATVLAPTDAATL
SDLAYAKLRGGDIDGARIPLMKAAELDQNNPKIISNLVLYLLASGRARDAQRLMAQQKLSADVRNDIRGDAMKITAAARA
WRRAAPPSASVATVTPVGSGSVVDVSGADVSRRPSPVANIQGFDPTAPLLQRFAQ
>Mature_295_residues
MKRIDEVAKVAGMVAMAGLLCACSAFKESGYGVGPQAERAALMDAAAQKQSAPDTPGMYLGLIERMQSQGLYYASLAHID
AYEKQYGASPQTILLRADALRMTDQPAASTAVYTQLLNTPLASRGYRGLGLIAGAAGDFPRAAQALAQATVLAPTDAATL
SDLAYAKLRGGDIDGARIPLMKAAELDQNNPKIISNLVLYLLASGRARDAQRLMAQQKLSADVRNDIRGDAMKITAAARA
WRRAAPPSASVATVTPVGSGSVVDVSGADVSRRPSPVANIQGFDPTAPLLQRFAQ

Specific function: Unknown

COG id: COG5010

COG function: function code U; Flp pilus assembly protein TadD, contains TPR repeats

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734
- InterPro:   IPR016931 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30917; Mature: 30917

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIDEVAKVAGMVAMAGLLCACSAFKESGYGVGPQAERAALMDAAAQKQSAPDTPGMYL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH
GLIERMQSQGLYYASLAHIDAYEKQYGASPQTILLRADALRMTDQPAASTAVYTQLLNTP
HHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHCC
LASRGYRGLGLIAGAAGDFPRAAQALAQATVLAPTDAATLSDLAYAKLRGGDIDGARIPL
HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
MKAAELDQNNPKIISNLVLYLLASGRARDAQRLMAQQKLSADVRNDIRGDAMKITAAARA
HHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
WRRAAPPSASVATVTPVGSGSVVDVSGADVSRRPSPVANIQGFDPTAPLLQRFAQ
HHHCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MKRIDEVAKVAGMVAMAGLLCACSAFKESGYGVGPQAERAALMDAAAQKQSAPDTPGMYL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH
GLIERMQSQGLYYASLAHIDAYEKQYGASPQTILLRADALRMTDQPAASTAVYTQLLNTP
HHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHCC
LASRGYRGLGLIAGAAGDFPRAAQALAQATVLAPTDAATLSDLAYAKLRGGDIDGARIPL
HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
MKAAELDQNNPKIISNLVLYLLASGRARDAQRLMAQQKLSADVRNDIRGDAMKITAAARA
HHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
WRRAAPPSASVATVTPVGSGSVVDVSGADVSRRPSPVANIQGFDPTAPLLQRFAQ
HHHCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]