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The map label for this gene is rimP [H]

Identifier: 115351433

GI number: 115351433

Start: 1516033

End: 1516491

Strand: Direct

Name: rimP [H]

Synonym: Bamb_1380

Alternate gene names: 115351433

Gene position: 1516033-1516491 (Clockwise)

Preceding gene: 115351432

Following gene: 115351434

Centisome position: 42.63

GC content: 58.39

Gene sequence:

>459_bases
GTGCAACTGACGGAACTGATAGAAACCACGGTCACCGGGCTCGGCTACGAGCTGGTGGATCTCGAGCGCACCGGGCGCGG
CATGCTTTGCATCTATATCGATCAGCTTGCCGGCATCTCGCTCGAAGATTGCGAAAAGGTCACGCGTCAGCTCCAGCACG
TCTTGACGGTCGAAAACATCGATTACGAACGGCTCGAAGTCTCGTCTCCGGGGCTCGACCGCCCGTTGAAGAAACTGGCC
GACTTCGAGCGCTTCGCCGGCAGCGAAGTTTCCGTGACCTTGAAAAAGCCGCTGGACGGGCGCAAGACGTACCGCGGCAT
TCTGCACGCGCCGAATGGCGAAACGATCGGTTTGGAATTTGAGGGGAAGAAGGGCGAGGCGGCCATGCTGGATTTCACGC
TGGCAGACATCGACAAAGCCCGCCTGATTCCGCAAGTTGACTTTAGGAGCCGCAAATAA

Upstream 100 bases:

>100_bases
GAAACGGTTAGGCATCTCGGGTAGCGCTTCCTGCGCCGGCTAAGGCGCGCGCCCGCGGGTGTAATCGCGAGCGGCGGGCG
CGAACACCTGAGAGGACACT

Downstream 100 bases:

>100_bases
TGAGTCGCGAAGTGTTGATGCTGGTGGATGCGCTGGCGCGCGAGAAAAACGTCGACAAGGATGTGGTGCTGGGCGCCCTC
GAGGCTGCGCTCGCGTCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MQLTELIETTVTGLGYELVDLERTGRGMLCIYIDQLAGISLEDCEKVTRQLQHVLTVENIDYERLEVSSPGLDRPLKKLA
DFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEFEGKKGEAAMLDFTLADIDKARLIPQVDFRSRK

Sequences:

>Translated_152_residues
MQLTELIETTVTGLGYELVDLERTGRGMLCIYIDQLAGISLEDCEKVTRQLQHVLTVENIDYERLEVSSPGLDRPLKKLA
DFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEFEGKKGEAAMLDFTLADIDKARLIPQVDFRSRK
>Mature_152_residues
MQLTELIETTVTGLGYELVDLERTGRGMLCIYIDQLAGISLEDCEKVTRQLQHVLTVENIDYERLEVSSPGLDRPLKKLA
DFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEFEGKKGEAAMLDFTLADIDKARLIPQVDFRSRK

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=149, Percent_Identity=41.6107382550336, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 17070; Mature: 17070

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTELIETTVTGLGYELVDLERTGRGMLCIYIDQLAGISLEDCEKVTRQLQHVLTVENI
CCHHHHHHHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEF
CCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHCCEEECCCCCEEEEEE
EGKKGEAAMLDFTLADIDKARLIPQVDFRSRK
ECCCCCEEEEEEEHHCCHHHHCCCCCCCCCCC
>Mature Secondary Structure
MQLTELIETTVTGLGYELVDLERTGRGMLCIYIDQLAGISLEDCEKVTRQLQHVLTVENI
CCHHHHHHHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEF
CCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHCCEEECCCCCEEEEEE
EGKKGEAAMLDFTLADIDKARLIPQVDFRSRK
ECCCCCEEEEEEEHHCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA