Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351409

Identifier: 115351409

GI number: 115351409

Start: 1489096

End: 1489989

Strand: Direct

Name: 115351409

Synonym: Bamb_1356

Alternate gene names: NA

Gene position: 1489096-1489989 (Clockwise)

Preceding gene: 115351408

Following gene: 115351410

Centisome position: 41.87

GC content: 69.46

Gene sequence:

>894_bases
ATGCCGATCACCTCAGCGAATCCCCCGGTTCCCCGTCAGCGACGCGTGCAGTGTGCAAGCGCCGCCGGCCTTCACCACGT
CGCCTATACCGAATGGGGCGACCCGGCCAATCCGCGCGTGCTGGTCTGCGTGCATGGCCTGACCCGTTCGGGGCGCGACT
TCGACCGGCTCGCCGCCGCGCTGTCCGATACATATCGCGTCGTCTGCCCCGACGTCGTCGGGCGCGGTCGCTCCGACTGG
CTCGCCGATCCGCGGCATTACGCGATTCCGCAATACGTCGCCGACATGGTCACGCTGATCGCGCGGCTCGACGTCGAGTC
GGTCGACTGGTTCGGCACGTCGATGGGCGGGCTGATCGGCATGGCGCTCGTGGGGTTGCCCGGTTCGCCGCTGCGCCGGA
TGATCGTCAACGACGTCGGCCCGCGCATCGAACCCGATTCGCTGACGCGCATCGGCGAATACCTCGGCGTGCAGCCGCGC
TTCGCGACCGAGCAGGAAGGCGTCGACTATCTGACGTCGCTATCGTTGCCGTTCGGGGAGTTGACCGCCGACGAATGGCG
CGAGATCAACCGGCCGCTGCTGCGCGAGCTGCCCGACGGCGGCTGGACGATGCGCTACGATCCGCGCATCGCCGAGCCGT
TCAAGGCGACGACGCCCGAGCTGGCCGCGCTCGGTGAGGCCACCCTGTGGCGCGCGATCGAGACGACCGATGCGTCGCTG
CTCGTCGTGCGCGGCGCCGAGTCGGACCTGTTGTCGCGCGAGACCGCCGCCGAGATGGTGCGCCGCGGCCGACATGTGAC
GCAGGCGGAAATTCCCGGCACGGGGCACGCGCCGGCATTCCTGAACGCCGACCAGATTGCGCTCGCGCGGCGGTTTTTCG
TCGAAGGCGCCTGA

Upstream 100 bases:

>100_bases
GTGCGTGACGACCTGCGTTGACGAAGCGGTTTACAATCGTTTGCATCGGGCGGCGCACGCGTTGCCCGCCGCGCCGCCTC
TGTTCGACAGGATCCCAACG

Downstream 100 bases:

>100_bases
TAAACGCGTCATAATATGCGGTTCGGCGCCGCACCGTCGCCGATTCTTCACCACTCAAACGACCGGAACATTCCATGGCA
GTCATTCGTCACCACGTCGG

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold; Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Or Acyltransferase; Hydrolase Protein; 2-Hydroxy-6-Oxo-6-Phenylhexa-2 4-Dienoate Hydrolase; Alpha/Beta Hydrolase Fold Family Protein; Esterase/Lipase/Thioesterase Family Protein; Hydrolase/Acyltransferase; D-(-)-3-Hydroxybutyrate Oligomer Hydrolase; Cation Diffusion Facilitator Family Transporter; Hydrolases Or Acyltransferases; Hydroxybutyrate-Dimer Hydrolase Protein; Alpha/Beta Hydrolase Fold Family; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase / Acyltransferase; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase Fold-Containing Protein

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MPITSANPPVPRQRRVQCASAAGLHHVAYTEWGDPANPRVLVCVHGLTRSGRDFDRLAAALSDTYRVVCPDVVGRGRSDW
LADPRHYAIPQYVADMVTLIARLDVESVDWFGTSMGGLIGMALVGLPGSPLRRMIVNDVGPRIEPDSLTRIGEYLGVQPR
FATEQEGVDYLTSLSLPFGELTADEWREINRPLLRELPDGGWTMRYDPRIAEPFKATTPELAALGEATLWRAIETTDASL
LVVRGAESDLLSRETAAEMVRRGRHVTQAEIPGTGHAPAFLNADQIALARRFFVEGA

Sequences:

>Translated_297_residues
MPITSANPPVPRQRRVQCASAAGLHHVAYTEWGDPANPRVLVCVHGLTRSGRDFDRLAAALSDTYRVVCPDVVGRGRSDW
LADPRHYAIPQYVADMVTLIARLDVESVDWFGTSMGGLIGMALVGLPGSPLRRMIVNDVGPRIEPDSLTRIGEYLGVQPR
FATEQEGVDYLTSLSLPFGELTADEWREINRPLLRELPDGGWTMRYDPRIAEPFKATTPELAALGEATLWRAIETTDASL
LVVRGAESDLLSRETAAEMVRRGRHVTQAEIPGTGHAPAFLNADQIALARRFFVEGA
>Mature_296_residues
PITSANPPVPRQRRVQCASAAGLHHVAYTEWGDPANPRVLVCVHGLTRSGRDFDRLAAALSDTYRVVCPDVVGRGRSDWL
ADPRHYAIPQYVADMVTLIARLDVESVDWFGTSMGGLIGMALVGLPGSPLRRMIVNDVGPRIEPDSLTRIGEYLGVQPRF
ATEQEGVDYLTSLSLPFGELTADEWREINRPLLRELPDGGWTMRYDPRIAEPFKATTPELAALGEATLWRAIETTDASLL
VVRGAESDLLSRETAAEMVRRGRHVTQAEIPGTGHAPAFLNADQIALARRFFVEGA

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32607; Mature: 32476

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPITSANPPVPRQRRVQCASAAGLHHVAYTEWGDPANPRVLVCVHGLTRSGRDFDRLAAA
CCCCCCCCCCCHHHHHHHHHHCCCHHEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHH
LSDTYRVVCPDVVGRGRSDWLADPRHYAIPQYVADMVTLIARLDVESVDWFGTSMGGLIG
HHHCCEEECHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
MALVGLPGSPLRRMIVNDVGPRIEPDSLTRIGEYLGVQPRFATEQEGVDYLTSLSLPFGE
HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHH
LTADEWREINRPLLRELPDGGWTMRYDPRIAEPFKATTPELAALGEATLWRAIETTDASL
CCHHHHHHHCHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHCHHHHHHHHHCCCCEE
LVVRGAESDLLSRETAAEMVRRGRHVTQAEIPGTGHAPAFLNADQIALARRFFVEGA
EEEECCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PITSANPPVPRQRRVQCASAAGLHHVAYTEWGDPANPRVLVCVHGLTRSGRDFDRLAAA
CCCCCCCCCCHHHHHHHHHHCCCHHEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHH
LSDTYRVVCPDVVGRGRSDWLADPRHYAIPQYVADMVTLIARLDVESVDWFGTSMGGLIG
HHHCCEEECHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
MALVGLPGSPLRRMIVNDVGPRIEPDSLTRIGEYLGVQPRFATEQEGVDYLTSLSLPFGE
HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHH
LTADEWREINRPLLRELPDGGWTMRYDPRIAEPFKATTPELAALGEATLWRAIETTDASL
CCHHHHHHHCHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHCHHHHHHHHHCCCCEE
LVVRGAESDLLSRETAAEMVRRGRHVTQAEIPGTGHAPAFLNADQIALARRFFVEGA
EEEECCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA