| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351208
Identifier: 115351208
GI number: 115351208
Start: 1263717
End: 1264454
Strand: Direct
Name: 115351208
Synonym: Bamb_1155
Alternate gene names: NA
Gene position: 1263717-1264454 (Clockwise)
Preceding gene: 115351207
Following gene: 115351210
Centisome position: 35.53
GC content: 72.22
Gene sequence:
>738_bases ATGAACCATGCTCGTTGGACAGGCGCCGGCGCGGGTCTCGCGCATGCGGCGCCACGCAGGGAGCCGATCGTGACCGAGTG TTTTGCCGATCGCGCCGACGCGGGTCGCCGGCTTGCGGACGCGCTGCACGACTATGCGGGGCGTCGCGACGTCGTCGTGC TCGCGCTGCCGCGCGGCGGCGTGCCGGTGGCATACCAGGTCGCGCTGGCGCTGCACGCGCCGCTCGACGTGCTGATCGTG CGCAAGCTCGGCATGCCGTCCGATCCCGAATTCGCGATCGGCGCGATCGCGACCGGCGGGGTGATCCACCTGCAACACGC GGCGATTCGCGCGATGGGCGTGACCGATGGCCAGCTGGCCGACGTGATCGCGCGCGAAACCGTCGAACTGGAGCGCCGCG ACGCGCTGTATCGCGGCGGCCGGTCGCCGCTGCCGGTCGACGGCCGCATCGCGATCGTCGTCGACGACGGCGTCGCGACC GGCGCATCGATGCGCGTCGCGCTGCAGGCGCTGCGCGAGCGCCATCCCGCGCGCATCGTGGCCGCCGCACCGGTTGCGCC GGCGGGCGCGCGGCACGTGTTCGACGGTCTGGCCGACGCGTTCGTGACGGTGTCGCAGCCGTACCTGTTCTTCGGGATCA GCCAGTTCTACGCGCGTTTCGACCAGACCGGGGACGACGAGGTGCGTGCGCTGCTCGAGGCGTCCCGCGCGCAGGACGAC GACATCACGTCCGTCTGA
Upstream 100 bases:
>100_bases GCCCGGGCGAACTCCACCGTCTCTTTCCGCGCGGCCACCCCCAAACCGCAATCCGCACGCATTCCACGCCGGTGTGACCC CGCTTGCATCGGCGCGTCCG
Downstream 100 bases:
>100_bases CCCGGCGCCGGCGCGCTGCCGGGCGAGCGGCTTCCGCCTGCGCGAACACCCGCTGCAGCGCCGGATGAACGTCGCCGCGC CAGCGGTCGCCCGTGAACAG
Product: phosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MNHARWTGAGAGLAHAAPRREPIVTECFADRADAGRRLADALHDYAGRRDVVVLALPRGGVPVAYQVALALHAPLDVLIV RKLGMPSDPEFAIGAIATGGVIHLQHAAIRAMGVTDGQLADVIARETVELERRDALYRGGRSPLPVDGRIAIVVDDGVAT GASMRVALQALRERHPARIVAAAPVAPAGARHVFDGLADAFVTVSQPYLFFGISQFYARFDQTGDDEVRALLEASRAQDD DITSV
Sequences:
>Translated_245_residues MNHARWTGAGAGLAHAAPRREPIVTECFADRADAGRRLADALHDYAGRRDVVVLALPRGGVPVAYQVALALHAPLDVLIV RKLGMPSDPEFAIGAIATGGVIHLQHAAIRAMGVTDGQLADVIARETVELERRDALYRGGRSPLPVDGRIAIVVDDGVAT GASMRVALQALRERHPARIVAAAPVAPAGARHVFDGLADAFVTVSQPYLFFGISQFYARFDQTGDDEVRALLEASRAQDD DITSV >Mature_245_residues MNHARWTGAGAGLAHAAPRREPIVTECFADRADAGRRLADALHDYAGRRDVVVLALPRGGVPVAYQVALALHAPLDVLIV RKLGMPSDPEFAIGAIATGGVIHLQHAAIRAMGVTDGQLADVIARETVELERRDALYRGGRSPLPVDGRIAIVVDDGVAT GASMRVALQALRERHPARIVAAAPVAPAGARHVFDGLADAFVTVSQPYLFFGISQFYARFDQTGDDEVRALLEASRAQDD DITSV
Specific function: Unknown
COG id: COG1926
COG function: function code R; Predicted phosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the N-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007815 - InterPro: IPR000836 [H]
Pfam domain/function: PF05139 Erythro_esteras; PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 26051; Mature: 26051
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHARWTGAGAGLAHAAPRREPIVTECFADRADAGRRLADALHDYAGRRDVVVLALPRGG CCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC VPVAYQVALALHAPLDVLIVRKLGMPSDPEFAIGAIATGGVIHLQHAAIRAMGVTDGQLA CCHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEEECCCEEEEHHHHHHEECCCCCHHH DVIARETVELERRDALYRGGRSPLPVDGRIAIVVDDGVATGASMRVALQALRERHPARIV HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEE AAAPVAPAGARHVFDGLADAFVTVSQPYLFFGISQFYARFDQTGDDEVRALLEASRAQDD EECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC DITSV CCCCC >Mature Secondary Structure MNHARWTGAGAGLAHAAPRREPIVTECFADRADAGRRLADALHDYAGRRDVVVLALPRGG CCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC VPVAYQVALALHAPLDVLIVRKLGMPSDPEFAIGAIATGGVIHLQHAAIRAMGVTDGQLA CCHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEEECCCEEEEHHHHHHEECCCCCHHH DVIARETVELERRDALYRGGRSPLPVDGRIAIVVDDGVATGASMRVALQALRERHPARIV HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEE AAAPVAPAGARHVFDGLADAFVTVSQPYLFFGISQFYARFDQTGDDEVRALLEASRAQDD EECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC DITSV CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]