Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351173

Identifier: 115351173

GI number: 115351173

Start: 1228320

End: 1229333

Strand: Direct

Name: 115351173

Synonym: Bamb_1120

Alternate gene names: NA

Gene position: 1228320-1229333 (Clockwise)

Preceding gene: 115351165

Following gene: 115351174

Centisome position: 34.54

GC content: 61.05

Gene sequence:

>1014_bases
ATGGGACAGTGTCGTCGCATCTATTCACGTTTCGTCGTCACTGGCTCGATCGCTGGTCTGGCGATTCTGGCAGGCATTGG
CCACGCGCATGCCGAGGACGGTCCCGCGAGCTCGCCGACCGCGTTCAAGCCATCGGAAAGAACGATCAACGCTTATGCGG
TGTATGGCGACGGACGCGCGACCGACGGCGGCGATATGCATTGGCGCGCCTACGAAGTCGGCTTCGGCGACGTGTTGAAC
GACTACTTCTCGATCTACCTCGCCTATTTGAACGAGGGGCATCCGGTGGATCACCACCGTGACGGCTTCGCCGCGCTCGG
TTCGTTTCGTTGGCCGCTCGGCAATCGCGTGGCGGTCGAATTGTCGGCGGGGCCGTATTTCAGCATCGACACGACCCATG
TCGACAACCAGGCGCGCAATGAAAAGCGCTGGGGTGTGCGCGCGTCAGCAGCCGTGCGGTATTACATCGTTCCCGACCGC
TTCTTCCTCAAGCTGCAGTACAACCACGTGCAGATGATTGGCGGATTCAATTCCGACGCGGTGCTGTTCGGCATCGGTTC
GGATTTTGGCGGCGATCCCGGCCCGGCGTTGTCGGACGGCAAGACGCAGGTCAGCATTTGGGCCGGGACGTCGCAGACGA
ACCGTCCGCAAGTGCCGATCGAAAAGGGCTATCTGGTCGAAGTCAAACGGCCGCTCGGGAATGCGTGGGCCTATTCGGCG
AGCTTCGTCTACGAAGGCAACAATGGCGTCGCCGGCCGCAGAGGTGTGGCAGCGCAACTCTGGTACGTCGCGCCGATCCA
GACCAAATGGACGCTGTCGGCAGGGGCAGGTCCGTATCTCTCGCACGATCGGGACGAAGTGTCGAGCAAAACGAGAGTCA
ATGCGTTGCTCAGCGCGCAGGTGAGTTACCAGGTCACGAGCGATTGGGCGGCGAGCTTGCGCTTCAATCGTGTCGCAACC
GGCAACGACAAGGACCAGGACATGTTCATGGTCGGATTGGCACGCAATTTCTAG

Upstream 100 bases:

>100_bases
CGAGGAATGCCAGCGGCCACGTCCAGTACCAGATTCGATTCGCATGACGTTCGTTCAACCGTCGTCCAGCATCCGGGTTC
AGCTCAGGTGGGGAGGCCAA

Downstream 100 bases:

>100_bases
GGCTTCATTCTTACGCGCATTCTCGCGGCGCAAATTGAAATTATGTGCGGTGCGGCATAAGCGTGGCATCTCGAGTGATG
TCGCCCGATTCCAGCGTACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MGQCRRIYSRFVVTGSIAGLAILAGIGHAHAEDGPASSPTAFKPSERTINAYAVYGDGRATDGGDMHWRAYEVGFGDVLN
DYFSIYLAYLNEGHPVDHHRDGFAALGSFRWPLGNRVAVELSAGPYFSIDTTHVDNQARNEKRWGVRASAAVRYYIVPDR
FFLKLQYNHVQMIGGFNSDAVLFGIGSDFGGDPGPALSDGKTQVSIWAGTSQTNRPQVPIEKGYLVEVKRPLGNAWAYSA
SFVYEGNNGVAGRRGVAAQLWYVAPIQTKWTLSAGAGPYLSHDRDEVSSKTRVNALLSAQVSYQVTSDWAASLRFNRVAT
GNDKDQDMFMVGLARNF

Sequences:

>Translated_337_residues
MGQCRRIYSRFVVTGSIAGLAILAGIGHAHAEDGPASSPTAFKPSERTINAYAVYGDGRATDGGDMHWRAYEVGFGDVLN
DYFSIYLAYLNEGHPVDHHRDGFAALGSFRWPLGNRVAVELSAGPYFSIDTTHVDNQARNEKRWGVRASAAVRYYIVPDR
FFLKLQYNHVQMIGGFNSDAVLFGIGSDFGGDPGPALSDGKTQVSIWAGTSQTNRPQVPIEKGYLVEVKRPLGNAWAYSA
SFVYEGNNGVAGRRGVAAQLWYVAPIQTKWTLSAGAGPYLSHDRDEVSSKTRVNALLSAQVSYQVTSDWAASLRFNRVAT
GNDKDQDMFMVGLARNF
>Mature_336_residues
GQCRRIYSRFVVTGSIAGLAILAGIGHAHAEDGPASSPTAFKPSERTINAYAVYGDGRATDGGDMHWRAYEVGFGDVLND
YFSIYLAYLNEGHPVDHHRDGFAALGSFRWPLGNRVAVELSAGPYFSIDTTHVDNQARNEKRWGVRASAAVRYYIVPDRF
FLKLQYNHVQMIGGFNSDAVLFGIGSDFGGDPGPALSDGKTQVSIWAGTSQTNRPQVPIEKGYLVEVKRPLGNAWAYSAS
FVYEGNNGVAGRRGVAAQLWYVAPIQTKWTLSAGAGPYLSHDRDEVSSKTRVNALLSAQVSYQVTSDWAASLRFNRVATG
NDKDQDMFMVGLARNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36834; Mature: 36703

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQCRRIYSRFVVTGSIAGLAILAGIGHAHAEDGPASSPTAFKPSERTINAYAVYGDGRA
CCHHHHHHHHHEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC
TDGGDMHWRAYEVGFGDVLNDYFSIYLAYLNEGHPVDHHRDGFAALGSFRWPLGNRVAVE
CCCCCCEEEEEECCCHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHCCEECCCCCEEEEE
LSAGPYFSIDTTHVDNQARNEKRWGVRASAAVRYYIVPDRFFLKLQYNHVQMIGGFNSDA
EECCCEEEEECCCCCCCCCCCHHCCEEEEEEEEEEEECCEEEEEEEECEEEEEECCCCCE
VLFGIGSDFGGDPGPALSDGKTQVSIWAGTSQTNRPQVPIEKGYLVEVKRPLGNAWAYSA
EEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEE
SFVYEGNNGVAGRRGVAAQLWYVAPIQTKWTLSAGAGPYLSHDRDEVSSKTRVNALLSAQ
EEEEECCCCCCCCCCCEEEEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHEEEEEEE
VSYQVTSDWAASLRFNRVATGNDKDQDMFMVGLARNF
EEEEECCCHHHHEEEEEEECCCCCCCCEEEEEEECCC
>Mature Secondary Structure 
GQCRRIYSRFVVTGSIAGLAILAGIGHAHAEDGPASSPTAFKPSERTINAYAVYGDGRA
CHHHHHHHHHEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC
TDGGDMHWRAYEVGFGDVLNDYFSIYLAYLNEGHPVDHHRDGFAALGSFRWPLGNRVAVE
CCCCCCEEEEEECCCHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHCCEECCCCCEEEEE
LSAGPYFSIDTTHVDNQARNEKRWGVRASAAVRYYIVPDRFFLKLQYNHVQMIGGFNSDA
EECCCEEEEECCCCCCCCCCCHHCCEEEEEEEEEEEECCEEEEEEEECEEEEEECCCCCE
VLFGIGSDFGGDPGPALSDGKTQVSIWAGTSQTNRPQVPIEKGYLVEVKRPLGNAWAYSA
EEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEE
SFVYEGNNGVAGRRGVAAQLWYVAPIQTKWTLSAGAGPYLSHDRDEVSSKTRVNALLSAQ
EEEEECCCCCCCCCCCEEEEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHEEEEEEE
VSYQVTSDWAASLRFNRVATGNDKDQDMFMVGLARNF
EEEEECCCHHHHEEEEEEECCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA