Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351174

Identifier: 115351174

GI number: 115351174

Start: 1229668

End: 1229814

Strand: Direct

Name: 115351174

Synonym: Bamb_1121

Alternate gene names: NA

Gene position: 1229668-1229814 (Clockwise)

Preceding gene: 115351173

Following gene: 115351175

Centisome position: 34.57

GC content: 51.02

Gene sequence:

>147_bases
ATGCACATATTCACGAACTTGAGCCCGTTGGTCTCGCTGATCGCTGGCATTCTGATTCTGGTGGTGCCGCGCCTGCTGAA
TTTCATCGTTGCGATCTACCTGATCATCATAGGATTGCTCGGACTGTTCGCAGGGCATATACACTGA

Upstream 100 bases:

>100_bases
CAGCGTTGAAAAGGAGCGGCTACGAAGCACAGGGTCGTGCAATACGGTTTCGAGGTGCTCCAGTTGGCGATTTCGCGATC
TATTGTTAAGGGGCAACGCC

Downstream 100 bases:

>100_bases
CGAGCCCTTTACGCCTCCGTCCCCGGTTCAACGGTCGCCGATTCAATGACGATTTGAAAAAACCGCGAGCGAGAAAACGA
ATGAAGCGCTCGCGGTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 48; Mature: 48

Protein sequence:

>48_residues
MHIFTNLSPLVSLIAGILILVVPRLLNFIVAIYLIIIGLLGLFAGHIH

Sequences:

>Translated_48_residues
MHIFTNLSPLVSLIAGILILVVPRLLNFIVAIYLIIIGLLGLFAGHIH
>Mature_48_residues
MHIFTNLSPLVSLIAGILILVVPRLLNFIVAIYLIIIGLLGLFAGHIH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5234; Mature: 5234

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIFTNLSPLVSLIAGILILVVPRLLNFIVAIYLIIIGLLGLFAGHIH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHIFTNLSPLVSLIAGILILVVPRLLNFIVAIYLIIIGLLGLFAGHIH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA