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The map label for this gene is yedA [H]

Identifier: 115351165

GI number: 115351165

Start: 1218797

End: 1219975

Strand: Direct

Name: yedA [H]

Synonym: Bamb_1111

Alternate gene names: 115351165

Gene position: 1218797-1219975 (Clockwise)

Preceding gene: 115351162

Following gene: 115351173

Centisome position: 34.27

GC content: 70.65

Gene sequence:

>1179_bases
ATGACACCGCTCGACCGCCTCCTCGATTTCCTCGCCCGCCTGCCGTTCCGGATCCGCCTGCCGCAAAGCCGCGGCGGCCG
TGTCGCACTGGCGCTGGTATTCATCTATTTCGTCTGGGGTTCGACCTACAGCGGCCTGCATTTCGCGCTGCAGTCGTTCC
CGCCGCTGCTGCTGTCAGGGCTGCGCAACCTGCTCGGCGGGATCGGCCTGTTCATCTTCGCGCTGCGGCGCAAGCCCGAA
TGGCCGACGCTGCTGGAAATCCGCAACTCGGCGATCGTCGGCACGATGCTGGTCGCGCTGTCGTCCGGCACGATCGCGCT
CGGGATGCGCACGGTCAGCAGCGGCTCGGCCGCGGTGATGGTCGCCACGGTGCCGCTGTTCGCGACCGTGATCGCGGCGG
TCGCCGGGCGCCCGGTGACGAAGGGCGAGTGGTCGGCCGTCGCGCTCGGGATGGTCGGCATCGTCGTGCTGAATTCGGGC
GGCGCGGCTGCCGCGAACTCGGCGCTCGGCACGATCTGCGTGCTGGCCGGCGCGCTGTTCTGGGCGGGCGGCGCGCATCT
GTCGACGCGGCTCAAGCTGCCGTCGGACCTGTTCCTGTCGACGTCGCTGCAGATCGGTCTCGGCGGGTTGATGTCCACGC
TGGCCGCGTGGCTGCTCGGCGAGCGCATCGAGCAGGTCGCGGCGGCGCCGGTGTTCGCGTTCCTGTACCTGATGGTGTTC
TGCACGATGGCGGCGTACGTCGCGTACGGCTACCTGATTCGCCACACGAGCCCGATCATCGCGAGCAGCTGCATGTACGT
GAACCCGATCGTCGCGGTCGCGCTCGGTGCGCTGATGCTCGGCGAGCCCGTGACGATGGCGACCGTGATCGCGACAGTCG
CGATTCTCGGCAGCGTCGGGCTGTCGTTCCTGTTCGATCCCGCGCGCCGTCCCGCCGCGCGCGCGGCGGTCGACGTTTCG
TCGACCGTGGCGACCGGCTCGGCGGCGGCGCATGCACCGGCACCTGCACCGGATCAGGCCGCGGCGCCGGATTCGCCGCC
GATCCTCACGCCTTCCGCGAAACCGCTTACGGTGCCGACCCCGGCCGCTGTCGTGGACCCGGCCGCGGTCATGGACCCTG
CTCAGGCATTCACGCCGCCACCCGCCGACGAACCGGCCGAGTCGCGCGCCCGCGCGTGA

Upstream 100 bases:

>100_bases
CACGTTTGTCTGCGCCTTCCCGGTCCCGTCAGGGCCGTTTGCCGGTTTCTCCGGCGTCTTTCAGCGCAGCGCGCGGCACG
TCGTGCAGGCAGGCTGACCG

Downstream 100 bases:

>100_bases
CGCCGCCGTGCGCGGCGGAGGTCAGCCGCGCTGCACGCCGCGATGGTGGAACCAGCCGGCGAGCGCGGTAAACAGCAGGC
CGGCCGCGCACATGCCGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MTPLDRLLDFLARLPFRIRLPQSRGGRVALALVFIYFVWGSTYSGLHFALQSFPPLLLSGLRNLLGGIGLFIFALRRKPE
WPTLLEIRNSAIVGTMLVALSSGTIALGMRTVSSGSAAVMVATVPLFATVIAAVAGRPVTKGEWSAVALGMVGIVVLNSG
GAAAANSALGTICVLAGALFWAGGAHLSTRLKLPSDLFLSTSLQIGLGGLMSTLAAWLLGERIEQVAAAPVFAFLYLMVF
CTMAAYVAYGYLIRHTSPIIASSCMYVNPIVAVALGALMLGEPVTMATVIATVAILGSVGLSFLFDPARRPAARAAVDVS
STVATGSAAAHAPAPAPDQAAAPDSPPILTPSAKPLTVPTPAAVVDPAAVMDPAQAFTPPPADEPAESRARA

Sequences:

>Translated_392_residues
MTPLDRLLDFLARLPFRIRLPQSRGGRVALALVFIYFVWGSTYSGLHFALQSFPPLLLSGLRNLLGGIGLFIFALRRKPE
WPTLLEIRNSAIVGTMLVALSSGTIALGMRTVSSGSAAVMVATVPLFATVIAAVAGRPVTKGEWSAVALGMVGIVVLNSG
GAAAANSALGTICVLAGALFWAGGAHLSTRLKLPSDLFLSTSLQIGLGGLMSTLAAWLLGERIEQVAAAPVFAFLYLMVF
CTMAAYVAYGYLIRHTSPIIASSCMYVNPIVAVALGALMLGEPVTMATVIATVAILGSVGLSFLFDPARRPAARAAVDVS
STVATGSAAAHAPAPAPDQAAAPDSPPILTPSAKPLTVPTPAAVVDPAAVMDPAQAFTPPPADEPAESRARA
>Mature_391_residues
TPLDRLLDFLARLPFRIRLPQSRGGRVALALVFIYFVWGSTYSGLHFALQSFPPLLLSGLRNLLGGIGLFIFALRRKPEW
PTLLEIRNSAIVGTMLVALSSGTIALGMRTVSSGSAAVMVATVPLFATVIAAVAGRPVTKGEWSAVALGMVGIVVLNSGG
AAAANSALGTICVLAGALFWAGGAHLSTRLKLPSDLFLSTSLQIGLGGLMSTLAAWLLGERIEQVAAAPVFAFLYLMVFC
TMAAYVAYGYLIRHTSPIIASSCMYVNPIVAVALGALMLGEPVTMATVIATVAILGSVGLSFLFDPARRPAARAAVDVSS
TVATGSAAAHAPAPAPDQAAAPDSPPILTPSAKPLTVPTPAAVVDPAAVMDPAQAFTPPPADEPAESRARA

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1788269, Length=297, Percent_Identity=36.7003367003367, Blast_Score=124, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 40382; Mature: 40251

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPLDRLLDFLARLPFRIRLPQSRGGRVALALVFIYFVWGSTYSGLHFALQSFPPLLLSG
CCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHH
LRNLLGGIGLFIFALRRKPEWPTLLEIRNSAIVGTMLVALSSGTIALGMRTVSSGSAAVM
HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEE
VATVPLFATVIAAVAGRPVTKGEWSAVALGMVGIVVLNSGGAAAANSALGTICVLAGALF
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHH
WAGGAHLSTRLKLPSDLFLSTSLQIGLGGLMSTLAAWLLGERIEQVAAAPVFAFLYLMVF
HCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CTMAAYVAYGYLIRHTSPIIASSCMYVNPIVAVALGALMLGEPVTMATVIATVAILGSVG
HHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LSFLFDPARRPAARAAVDVSSTVATGSAAAHAPAPAPDQAAAPDSPPILTPSAKPLTVPT
HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
PAAVVDPAAVMDPAQAFTPPPADEPAESRARA
CHHHCCCHHHCCCHHHCCCCCCCCCCHHCCCC
>Mature Secondary Structure 
TPLDRLLDFLARLPFRIRLPQSRGGRVALALVFIYFVWGSTYSGLHFALQSFPPLLLSG
CHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHH
LRNLLGGIGLFIFALRRKPEWPTLLEIRNSAIVGTMLVALSSGTIALGMRTVSSGSAAVM
HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEE
VATVPLFATVIAAVAGRPVTKGEWSAVALGMVGIVVLNSGGAAAANSALGTICVLAGALF
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHH
WAGGAHLSTRLKLPSDLFLSTSLQIGLGGLMSTLAAWLLGERIEQVAAAPVFAFLYLMVF
HCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CTMAAYVAYGYLIRHTSPIIASSCMYVNPIVAVALGALMLGEPVTMATVIATVAILGSVG
HHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LSFLFDPARRPAARAAVDVSSTVATGSAAAHAPAPAPDQAAAPDSPPILTPSAKPLTVPT
HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
PAAVVDPAAVMDPAQAFTPPPADEPAESRARA
CHHHCCCHHHCCCHHHCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]