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The map label for this gene is yedY [H]

Identifier: 115351162

GI number: 115351162

Start: 1216860

End: 1217648

Strand: Direct

Name: yedY [H]

Synonym: Bamb_1108

Alternate gene names: 115351162

Gene position: 1216860-1217648 (Clockwise)

Preceding gene: 115351161

Following gene: 115351165

Centisome position: 34.21

GC content: 65.02

Gene sequence:

>789_bases
ATGTCGGAATCCGAAAGCACGCGCGACCGTTCGCGCTGGACGCTCGACCGCAAGTCGCTCGAACTCGACGTACGCCGCAC
GCTCGACATGCCGTCGCGGCGGCTTTTCAACCGCCGCATCCTGACGCTCGGCGGCCTCACGATGCTGACCGGCTGTTCGC
TGCAGGACGACGCGTCGGTCAATACGTTTCTCGAGCGGGTATCGCGGCTGAACGATCGCGTGCAGGCGTGGATCTTCAGC
GGCGAGCGGCTCGCGCCGACCTATACCGAAGCCGACATTACGCGGCCGTTCCCGTTCAACGCGTACTACGGCATCGACGA
GGTGCCGCACGTCGACGCGGCGACGTACCGGCTCATGCTGTCGGGCCGCGTGACGGGCAAGCGCGTGTGGACGCTCGACG
AGCTGTATGCGCTGCCGCACGCGGAGCAGATCACGCGGCACATCTGCGTGGAAGGGTGGAGCGCGATCGGGCGCTGGGGC
GGCACGCCGTTCGGCGCGTTTCTGGCGCGCGCGGGCGCCGATACACACGCGAAATACGTCGGCTTCAAATGCGCGGACGA
TTACTACGAAAGCATCGACATGCCGACCGCGCTGCATCCGCAGACGCTGCTCACATTCGACTACGACGGCCAGCGCCTGC
CGCCGGAATTCGGCTTTCCGATGAAGCTGCGGATGCCGACCAAGCTCGGCTACAAGAATCCGAAGCACATCATGGAAATC
TTCGTGACCGATACGTTCCCGGGCGGCTACTGGGTCGACCAGGGGTACAACTGGTTCGGCGGATCGTGA

Upstream 100 bases:

>100_bases
TCGTCGTCGTGCACGTCGCGATGGCGTTGCGCGTGCCGCGCTCGCTGCTCGCGATGCTGCGCGGACGTTGACCCGCACCG
TGCGGGCAAAGGGGATCATC

Downstream 100 bases:

>100_bases
GCGGCGGGGCTGGCCGATGCGTTACGCCGATTGGCGCACCTGCAGATCGACGCGCAGGCCGACGGCCGACGCCATGTTCA
CGAGCGCGTCGAGCCCGAAC

Product: molybdopterin binding oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSESESTRDRSRWTLDRKSLELDVRRTLDMPSRRLFNRRILTLGGLTMLTGCSLQDDASVNTFLERVSRLNDRVQAWIFS
GERLAPTYTEADITRPFPFNAYYGIDEVPHVDAATYRLMLSGRVTGKRVWTLDELYALPHAEQITRHICVEGWSAIGRWG
GTPFGAFLARAGADTHAKYVGFKCADDYYESIDMPTALHPQTLLTFDYDGQRLPPEFGFPMKLRMPTKLGYKNPKHIMEI
FVTDTFPGGYWVDQGYNWFGGS

Sequences:

>Translated_262_residues
MSESESTRDRSRWTLDRKSLELDVRRTLDMPSRRLFNRRILTLGGLTMLTGCSLQDDASVNTFLERVSRLNDRVQAWIFS
GERLAPTYTEADITRPFPFNAYYGIDEVPHVDAATYRLMLSGRVTGKRVWTLDELYALPHAEQITRHICVEGWSAIGRWG
GTPFGAFLARAGADTHAKYVGFKCADDYYESIDMPTALHPQTLLTFDYDGQRLPPEFGFPMKLRMPTKLGYKNPKHIMEI
FVTDTFPGGYWVDQGYNWFGGS
>Mature_261_residues
SESESTRDRSRWTLDRKSLELDVRRTLDMPSRRLFNRRILTLGGLTMLTGCSLQDDASVNTFLERVSRLNDRVQAWIFSG
ERLAPTYTEADITRPFPFNAYYGIDEVPHVDAATYRLMLSGRVTGKRVWTLDELYALPHAEQITRHICVEGWSAIGRWGG
TPFGAFLARAGADTHAKYVGFKCADDYYESIDMPTALHPQTLLTFDYDGQRLPPEFGFPMKLRMPTKLGYKNPKHIMEIF
VTDTFPGGYWVDQGYNWFGGS

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=181, Percent_Identity=31.4917127071823, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 29972; Mature: 29841

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESESTRDRSRWTLDRKSLELDVRRTLDMPSRRLFNRRILTLGGLTMLTGCSLQDDASV
CCCCCCCCHHHHEEECHHHHEEHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCHH
NTFLERVSRLNDRVQAWIFSGERLAPTYTEADITRPFPFNAYYGIDEVPHVDAATYRLML
HHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEE
SGRVTGKRVWTLDELYALPHAEQITRHICVEGWSAIGRWGGTPFGAFLARAGADTHAKYV
ECCCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHEE
GFKCADDYYESIDMPTALHPQTLLTFDYDGQRLPPEFGFPMKLRMPTKLGYKNPKHIMEI
EEEEHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCHHCCCCCHHHEEEE
FVTDTFPGGYWVDQGYNWFGGS
EEECCCCCCEEECCCCCCCCCC
>Mature Secondary Structure 
SESESTRDRSRWTLDRKSLELDVRRTLDMPSRRLFNRRILTLGGLTMLTGCSLQDDASV
CCCCCCCHHHHEEECHHHHEEHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCHH
NTFLERVSRLNDRVQAWIFSGERLAPTYTEADITRPFPFNAYYGIDEVPHVDAATYRLML
HHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEE
SGRVTGKRVWTLDELYALPHAEQITRHICVEGWSAIGRWGGTPFGAFLARAGADTHAKYV
ECCCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHEE
GFKCADDYYESIDMPTALHPQTLLTFDYDGQRLPPEFGFPMKLRMPTKLGYKNPKHIMEI
EEEEHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCHHCCCCCHHHEEEE
FVTDTFPGGYWVDQGYNWFGGS
EEECCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14500908 [H]