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The map label for this gene is 115351161

Identifier: 115351161

GI number: 115351161

Start: 1216198

End: 1216830

Strand: Direct

Name: 115351161

Synonym: Bamb_1107

Alternate gene names: NA

Gene position: 1216198-1216830 (Clockwise)

Preceding gene: 115351160

Following gene: 115351162

Centisome position: 34.2

GC content: 68.25

Gene sequence:

>633_bases
ATGCAAACCGTTCCCGCCACAGGTCGCGACGCGGCGTCACCGCCCGCGCGCCCGATCCATCCGGTGTGGGTGCGCGTGAG
CCACTGGCTCAACGCGCTCGCGGCGATCCTGATGGTGTTGTCCGGCTGGCGCATCTACGACGCGTCGCCGATCTATCCGC
CGTTCACGTTTCCTCACGGCATCACGCTCGGCGGCTGGCTGGGCGGCGCGCTGCAATGGCATTTCGCGGCGATGTGGCTG
CTCGTCGCCAACGGATTGTTCTACCTCGCGATGTCGATCACGACCGGGCGCTTCGCGCGCATGCTGCTGCCGGTCACGCC
GGCGTCCGTTTGGCGCGACCTGCGTGCCGCACTGCGCGGACGGCTGGCGCATGACGACCTCGGCGTCTACAACGCGGTGC
AGCGCACCGCGTACCTGACCGCGATCGTCGACCTCGTCGTGCTGGTGCTGTCGGGGCTCACCATCTGGAAGTCCGTGCAG
TTTCCGCTGCTGCGCGAGCTGTTCGGCGGCTACGACATGGCGCGCGTCGTGCATTTCTGGGCGATGTCGCTGCTGGTCGC
ATTCGTCGTCGTGCACGTCGCGATGGCGTTGCGCGTGCCGCGCTCGCTGCTCGCGATGCTGCGCGGACGTTGA

Upstream 100 bases:

>100_bases
AACTGACGCCGGCGGGCGCGGCAGGCGGTGCGTGCATTGCATCGCCCGCCGCGCCGTATGCGTGCGTTTGCATCATTCCC
GCATCTCCGGAGGTTTCATC

Downstream 100 bases:

>100_bases
CCCGCACCGTGCGGGCAAAGGGGATCATCATGTCGGAATCCGAAAGCACGCGCGACCGTTCGCGCTGGACGCTCGACCGC
AAGTCGCTCGAACTCGACGT

Product: cytochrome b561

Products: NA

Alternate protein names: Cytochrome B; Transmembrane Hydrogenase Cytochrome B-Type Subunit; HupC/HyaC/HydC Family Protein; Thiosulfate Reductase Cytochrome Subunit B; Thiosulfate Reductase Cytochrome B Subunit-Like Protein; Thiosulfate Reductase Cytochrome Subunit B-Like Protein; Transmembrane B-Type Cytochrome Protein; Transmembrane Hydrogenase Cytochrome B- Type Subunit; Cytochrome; Cytochrome B/B6 Domain Protein; Conserved Protein; B-Type Cytochomre; Transmembrane Hydrogenase Cytochrome

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MQTVPATGRDAASPPARPIHPVWVRVSHWLNALAAILMVLSGWRIYDASPIYPPFTFPHGITLGGWLGGALQWHFAAMWL
LVANGLFYLAMSITTGRFARMLLPVTPASVWRDLRAALRGRLAHDDLGVYNAVQRTAYLTAIVDLVVLVLSGLTIWKSVQ
FPLLRELFGGYDMARVVHFWAMSLLVAFVVVHVAMALRVPRSLLAMLRGR

Sequences:

>Translated_210_residues
MQTVPATGRDAASPPARPIHPVWVRVSHWLNALAAILMVLSGWRIYDASPIYPPFTFPHGITLGGWLGGALQWHFAAMWL
LVANGLFYLAMSITTGRFARMLLPVTPASVWRDLRAALRGRLAHDDLGVYNAVQRTAYLTAIVDLVVLVLSGLTIWKSVQ
FPLLRELFGGYDMARVVHFWAMSLLVAFVVVHVAMALRVPRSLLAMLRGR
>Mature_210_residues
MQTVPATGRDAASPPARPIHPVWVRVSHWLNALAAILMVLSGWRIYDASPIYPPFTFPHGITLGGWLGGALQWHFAAMWL
LVANGLFYLAMSITTGRFARMLLPVTPASVWRDLRAALRGRLAHDDLGVYNAVQRTAYLTAIVDLVVLVLSGLTIWKSVQ
FPLLRELFGGYDMARVVHFWAMSLLVAFVVVHVAMALRVPRSLLAMLRGR

Specific function: Unknown

COG id: COG4117

COG function: function code C; Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23324; Mature: 23324

Theoretical pI: Translated: 11.69; Mature: 11.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTVPATGRDAASPPARPIHPVWVRVSHWLNALAAILMVLSGWRIYDASPIYPPFTFPHG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCC
ITLGGWLGGALQWHFAAMWLLVANGLFYLAMSITTGRFARMLLPVTPASVWRDLRAALRG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
RLAHDDLGVYNAVQRTAYLTAIVDLVVLVLSGLTIWKSVQFPLLRELFGGYDMARVVHFW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCHHHHHHHHHH
AMSLLVAFVVVHVAMALRVPRSLLAMLRGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQTVPATGRDAASPPARPIHPVWVRVSHWLNALAAILMVLSGWRIYDASPIYPPFTFPHG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCC
ITLGGWLGGALQWHFAAMWLLVANGLFYLAMSITTGRFARMLLPVTPASVWRDLRAALRG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
RLAHDDLGVYNAVQRTAYLTAIVDLVVLVLSGLTIWKSVQFPLLRELFGGYDMARVVHFW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCHHHHHHHHHH
AMSLLVAFVVVHVAMALRVPRSLLAMLRGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA