Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is astE [H]

Identifier: 115351120

GI number: 115351120

Start: 1158115

End: 1159218

Strand: Direct

Name: astE [H]

Synonym: Bamb_1066

Alternate gene names: 115351120

Gene position: 1158115-1159218 (Clockwise)

Preceding gene: 115351119

Following gene: 115351121

Centisome position: 32.56

GC content: 71.56

Gene sequence:

>1104_bases
ATGACTTCCAGCGCTGAGTCCCGCATGCCGGCCGCCGCGCTGCTCGACGACTTCCTCGAGTTCACGCTCGCGGGCGACCC
GCCGGCCGTGAAGGACGGCGCGTGCGCGGACGGCGCGGTGCGCTGGCAATGGCTCGGCGACGGGCTGCTCGCGTTCGAGC
CGGCCGCACGCGATGCGGCGGGCGATGCCGATGCTGACGCTGCGCGCGCGAGCGTGCTCGTGTCGGCCGGCGTGCATGGC
GACGAGACCGCGCCGATCGAGCTGCTGTCGATGCTCGTGCATGATCTCGCGGCGGGCACGCTGCCGCTCGCGTGCCGGCT
GCTCGTCGTGCTCGGCAACGTGCCGGCGATGCGCGCGGGCGAGCGCTATCTCGACGACGACCTGAACCGCCTGTTCAGCG
GCCGTCACGCGCAGGTGCCGACGAGCCGCGAAGCGCCGCGCGCGGCGCAGCTCGAAGCGGCGGCCGCCGCGTTCTTCGCG
GCCGCGCCGGCGGGCGGTGCACGCTGGCACATCGACATGCACACGGCGATTCGCGCATCGGTGTTCGAGCAGTTCGCGCT
GCTGCCGCACACGGGCACGCCGCCGACCCGCGCGATGGTCGAATGGCTTGGCGAAGCGCGCATCGCGGCCGTGCTGCTGC
ATACCGCGAAGGGCAACACGTATTCGCATTTCACGGCCGAGCACTGTTGCACGCTCGCGTGCACGCTGGAACTCGGCAAG
GTGCGGCCGTTTGGCCAGAACGATCTGTCGCGCTTCGCGCCGGCCGACCGCGCGGTGCGCAAGCTCGTGTCGGGCGCGCC
CCGTGATGTCGATGCGCGGGGCGGCCATCCGGGGGCGAGCCATGCGCCGTTGCCACGCGTGTTCACCGTGATCGACCAGA
TCACGAAGCAGAGCGATGCGCTCGAGCTGTTCGTCGCGGCCGACGTCGCGAACTTCACCGCGTTCGCGCGCGGCACCGTG
CTCGCGCAGGACGGCGACTACCGCTATACGGTGAAGCACGACGAGGAGCGCATCGTGTTCCCGAATCCGTCGGTGAAGCC
GGGCTTGCGCGCGGGCCTGCTCGTCGTCGACACGACGCGCGACACGCTCGCCGCGCTCGTTTGA

Upstream 100 bases:

>100_bases
GACCGTCTCGCCCCGGAAGATCTCGCCGATCCGACGCTGCTCGACGAATCGCGCACGGCGCTCGACGAGCTCACGCAGAT
CCTGCGTGTCGGGTCGCTGT

Downstream 100 bases:

>100_bases
GCGATGCGCGGTTGCGCGCGGCTGCGGTGATCGGCAGCCCGCGCGTCGTCGCGCCGCATTCGCATTTTGGGTTGACGTCC
GCCGGCCGCGCATCGGCCCT

Product: succinylglutamate desuccinylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MTSSAESRMPAAALLDDFLEFTLAGDPPAVKDGACADGAVRWQWLGDGLLAFEPAARDAAGDADADAARASVLVSAGVHG
DETAPIELLSMLVHDLAAGTLPLACRLLVVLGNVPAMRAGERYLDDDLNRLFSGRHAQVPTSREAPRAAQLEAAAAAFFA
AAPAGGARWHIDMHTAIRASVFEQFALLPHTGTPPTRAMVEWLGEARIAAVLLHTAKGNTYSHFTAEHCCTLACTLELGK
VRPFGQNDLSRFAPADRAVRKLVSGAPRDVDARGGHPGASHAPLPRVFTVIDQITKQSDALELFVAADVANFTAFARGTV
LAQDGDYRYTVKHDEERIVFPNPSVKPGLRAGLLVVDTTRDTLAALV

Sequences:

>Translated_367_residues
MTSSAESRMPAAALLDDFLEFTLAGDPPAVKDGACADGAVRWQWLGDGLLAFEPAARDAAGDADADAARASVLVSAGVHG
DETAPIELLSMLVHDLAAGTLPLACRLLVVLGNVPAMRAGERYLDDDLNRLFSGRHAQVPTSREAPRAAQLEAAAAAFFA
AAPAGGARWHIDMHTAIRASVFEQFALLPHTGTPPTRAMVEWLGEARIAAVLLHTAKGNTYSHFTAEHCCTLACTLELGK
VRPFGQNDLSRFAPADRAVRKLVSGAPRDVDARGGHPGASHAPLPRVFTVIDQITKQSDALELFVAADVANFTAFARGTV
LAQDGDYRYTVKHDEERIVFPNPSVKPGLRAGLLVVDTTRDTLAALV
>Mature_366_residues
TSSAESRMPAAALLDDFLEFTLAGDPPAVKDGACADGAVRWQWLGDGLLAFEPAARDAAGDADADAARASVLVSAGVHGD
ETAPIELLSMLVHDLAAGTLPLACRLLVVLGNVPAMRAGERYLDDDLNRLFSGRHAQVPTSREAPRAAQLEAAAAAFFAA
APAGGARWHIDMHTAIRASVFEQFALLPHTGTPPTRAMVEWLGEARIAAVLLHTAKGNTYSHFTAEHCCTLACTLELGKV
RPFGQNDLSRFAPADRAVRKLVSGAPRDVDARGGHPGASHAPLPRVFTVIDQITKQSDALELFVAADVANFTAFARGTVL
AQDGDYRYTVKHDEERIVFPNPSVKPGLRAGLLVVDTTRDTLAALV

Specific function: Transforms N(2)-succinylglutamate into succinate and glutamate [H]

COG id: COG2988

COG function: function code E; Succinylglutamate desuccinylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788040, Length=341, Percent_Identity=42.2287390029325, Blast_Score=276, Evalue=1e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007036
- InterPro:   IPR016681 [H]

Pfam domain/function: PF04952 AstE_AspA [H]

EC number: =3.5.1.96 [H]

Molecular weight: Translated: 38895; Mature: 38764

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSAESRMPAAALLDDFLEFTLAGDPPAVKDGACADGAVRWQWLGDGLLAFEPAARDAA
CCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCC
GDADADAARASVLVSAGVHGDETAPIELLSMLVHDLAAGTLPLACRLLVVLGNVPAMRAG
CCCCCHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHCC
ERYLDDDLNRLFSGRHAQVPTSREAPRAAQLEAAAAAFFAAAPAGGARWHIDMHTAIRAS
CHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHH
VFEQFALLPHTGTPPTRAMVEWLGEARIAAVLLHTAKGNTYSHFTAEHCCTLACTLELGK
HHHHHHHCCCCCCCHHHHHHHHHHHHHEEHHEEECCCCCCCCCCCHHHHEEEEEEEECCC
VRPFGQNDLSRFAPADRAVRKLVSGAPRDVDARGGHPGASHAPLPRVFTVIDQITKQSDA
CCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
LELFVAADVANFTAFARGTVLAQDGDYRYTVKHDEERIVFPNPSVKPGLRAGLLVVDTTR
EEEEEEHHHHHHHHHHCCEEEEECCCEEEEEECCCCEEECCCCCCCCCCCCCEEEEECCH
DTLAALV
HHHHHCC
>Mature Secondary Structure 
TSSAESRMPAAALLDDFLEFTLAGDPPAVKDGACADGAVRWQWLGDGLLAFEPAARDAA
CCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCC
GDADADAARASVLVSAGVHGDETAPIELLSMLVHDLAAGTLPLACRLLVVLGNVPAMRAG
CCCCCHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHCC
ERYLDDDLNRLFSGRHAQVPTSREAPRAAQLEAAAAAFFAAAPAGGARWHIDMHTAIRAS
CHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHH
VFEQFALLPHTGTPPTRAMVEWLGEARIAAVLLHTAKGNTYSHFTAEHCCTLACTLELGK
HHHHHHHCCCCCCCHHHHHHHHHHHHHEEHHEEECCCCCCCCCCCHHHHEEEEEEEECCC
VRPFGQNDLSRFAPADRAVRKLVSGAPRDVDARGGHPGASHAPLPRVFTVIDQITKQSDA
CCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
LELFVAADVANFTAFARGTVLAQDGDYRYTVKHDEERIVFPNPSVKPGLRAGLLVVDTTR
EEEEEEHHHHHHHHHHCCEEEEECCCEEEEEECCCCEEECCCCCCCCCCCCCEEEEECCH
DTLAALV
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA