| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115350943
Identifier: 115350943
GI number: 115350943
Start: 976893
End: 977543
Strand: Direct
Name: 115350943
Synonym: Bamb_0889
Alternate gene names: NA
Gene position: 976893-977543 (Clockwise)
Preceding gene: 115350942
Following gene: 115350945
Centisome position: 27.47
GC content: 68.2
Gene sequence:
>651_bases ATGGCCGCCTGCGTGCACGCGGGCGCAGCATGGTCGGCCGATGCGAGCGCGCCCGCTGCCGGTACGCGCCCCGCGGTGAC GAGCCTGAGCGGCGATGGCGCGCCGGCGACGGCGTCCCCCGCGTCCGCGACGGATGCCGCCGCGCAAGGCAACGTGGCCG AACTCACGCAGATGCTGCAAGACGGGCGGATCGTCGAGATGCGCACCACCTACAACGGCAGCTATGGCGCGAGCCTGATG TTCGATCAGCGCGAGATGACGTATTACGTCGCGCTGTTCCAGGACAAGCATCTGTGGCGCGTGATCAAGTCGCAGGAGAA GAGCCGCGCGGAGATGGTGTACACGAACTTCGTCCAGCAGACGGTGCAGCTCGCGGACGTCGAGATCCGTCGCACCGAAC TGCAGGCGCAGAAGACGTTCCTCGAACGCGTGATCGCGCTGCAGGCGAATCGCGCGCAGCAACTGCAAGCCGATCTGAGC GTCGCGCGCAGTCAGCAGGCCGAGGTCGCGCAGCGGCAGCAGTCGGCGCGGGAGCAGACGCAGGCGCTGCAGGTCGAGAA GCGGGCCGCGCAAGTGCAGCTGCGCGATCTGCAGGAGCAGGTGCGGCAACTCGAGAAGCAGACCGAGACGGGGCTCACCG CGCACAAGTGA
Upstream 100 bases:
>100_bases CGTTTTGAACGATAATCGCGACTCCCGATTCGTTCGCCGGAGTCTGACGTTGGTCTTCCGAAAATTTTCCCCCGCACGAT GCGCAACGTGGATCGTTGCG
Downstream 100 bases:
>100_bases CGATGCGAAGGACGGACCGAGAGAGACGAGCGAAACCCGGCGAAGCGATCTTCGCCGGGTTTTTTGTTGGGTGAGTGTCA GCGCGCGAACGCGTCAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Exported Lipoprotein; Molecular Chaperone; Exported Protein
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MAACVHAGAAWSADASAPAAGTRPAVTSLSGDGAPATASPASATDAAAQGNVAELTQMLQDGRIVEMRTTYNGSYGASLM FDQREMTYYVALFQDKHLWRVIKSQEKSRAEMVYTNFVQQTVQLADVEIRRTELQAQKTFLERVIALQANRAQQLQADLS VARSQQAEVAQRQQSAREQTQALQVEKRAAQVQLRDLQEQVRQLEKQTETGLTAHK
Sequences:
>Translated_216_residues MAACVHAGAAWSADASAPAAGTRPAVTSLSGDGAPATASPASATDAAAQGNVAELTQMLQDGRIVEMRTTYNGSYGASLM FDQREMTYYVALFQDKHLWRVIKSQEKSRAEMVYTNFVQQTVQLADVEIRRTELQAQKTFLERVIALQANRAQQLQADLS VARSQQAEVAQRQQSAREQTQALQVEKRAAQVQLRDLQEQVRQLEKQTETGLTAHK >Mature_215_residues AACVHAGAAWSADASAPAAGTRPAVTSLSGDGAPATASPASATDAAAQGNVAELTQMLQDGRIVEMRTTYNGSYGASLMF DQREMTYYVALFQDKHLWRVIKSQEKSRAEMVYTNFVQQTVQLADVEIRRTELQAQKTFLERVIALQANRAQQLQADLSV ARSQQAEVAQRQQSAREQTQALQVEKRAAQVQLRDLQEQVRQLEKQTETGLTAHK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23753; Mature: 23622
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAACVHAGAAWSADASAPAAGTRPAVTSLSGDGAPATASPASATDAAAQGNVAELTQMLQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHH DGRIVEMRTTYNGSYGASLMFDQREMTYYVALFQDKHLWRVIKSQEKSRAEMVYTNFVQQ CCCEEEEEECCCCCCCCEEEECCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH TVQLADVEIRRTELQAQKTFLERVIALQANRAQQLQADLSVARSQQAEVAQRQQSAREQT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QALQVEKRAAQVQLRDLQEQVRQLEKQTETGLTAHK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AACVHAGAAWSADASAPAAGTRPAVTSLSGDGAPATASPASATDAAAQGNVAELTQMLQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHH DGRIVEMRTTYNGSYGASLMFDQREMTYYVALFQDKHLWRVIKSQEKSRAEMVYTNFVQQ CCCEEEEEECCCCCCCCEEEECCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH TVQLADVEIRRTELQAQKTFLERVIALQANRAQQLQADLSVARSQQAEVAQRQQSAREQT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QALQVEKRAAQVQLRDLQEQVRQLEKQTETGLTAHK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA