| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115350901
Identifier: 115350901
GI number: 115350901
Start: 933456
End: 933566
Strand: Direct
Name: 115350901
Synonym: Bamb_0847
Alternate gene names: NA
Gene position: 933456-933566 (Clockwise)
Preceding gene: 115350900
Following gene: 115350903
Centisome position: 26.25
GC content: 63.96
Gene sequence:
>111_bases ATGAAACGAACCGCCATTGCGATCGCACTCGTCGCGATCACGCTCGCCGGCTGTATCGTCGTGCCGGCCCGGCCTGTCTA CTATCGGCCGGCGCCGGTGGTGATCTACTGA
Upstream 100 bases:
>100_bases AGCCCAGCGTGTCGGCATGCACTGGGTGCCGGGCCACTGGAATCAGCGCGGCCCGAACTGGTTCTGGACCCGCGGCCACT GGGCTTGACGGAGGCGTGCA
Downstream 100 bases:
>100_bases GTGTCGGTCGGGCCCGGTTGCGCCGGTCCGTTCGCGCCGGATGCCGGCCGGCCGCCGTCATGCGGCGTCGCCGGCGTTTG CGCGGCGCCGGTGTCCGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 36; Mature: 36
Protein sequence:
>36_residues MKRTAIAIALVAITLAGCIVVPARPVYYRPAPVVIY
Sequences:
>Translated_36_residues MKRTAIAIALVAITLAGCIVVPARPVYYRPAPVVIY >Mature_36_residues MKRTAIAIALVAITLAGCIVVPARPVYYRPAPVVIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3871; Mature: 3871
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTAIAIALVAITLAGCIVVPARPVYYRPAPVVIY CCCHHHHHHHHHHHHHCEEEECCCCCEECCCCEEEC >Mature Secondary Structure MKRTAIAIALVAITLAGCIVVPARPVYYRPAPVVIY CCCHHHHHHHHHHHHHCEEEECCCCCEECCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA