| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115350784
Identifier: 115350784
GI number: 115350784
Start: 810931
End: 811563
Strand: Direct
Name: 115350784
Synonym: Bamb_0730
Alternate gene names: NA
Gene position: 810931-811563 (Clockwise)
Preceding gene: 115350783
Following gene: 115350785
Centisome position: 22.8
GC content: 69.19
Gene sequence:
>633_bases ATGATTGCCGCATTGCTGGCCGCGAGCCTGATAGGAGCGAGCATGACAGCCGACCCGGTGACCGTTGCGCAGGCACATTT CGACCAGGTCCGCTCGTACCGCGCGACGATCCGCTCGTCGGCGCGAAGCGGCGAGCGCACCGAATTCCACTATGCGTACC TGAAACCCGGTTTCGTCCGGATGGACTTCGTGTCGCCCCATCGTGGCGCGGTGCTCGCGTACGATCCCGGCGACGGCAAG GTCCGGCTGCGCCCGTTCGGCGAGCATGCGCCGCCCGCGCTGAGGCTATCGCCGACCAATCCGCTCGTGCGCGACCGCAG CGGTCATCGCGTCGACCGCTCGGACGTCGGCGAGCTGCTGCGCAACGTGCATGCGCTGCAGCAGGGCGGCGCGACGGTCA CGGAGGGCGAGGAGACCATCAACGGGCGGACCACGCTGCGCGTGTCGGTGACGGGCGCGCCCGCGCACGCGGTCGACGGC GTGCATCGCTACCGGCTGTGGCTGGACACCGAGGACGGTTTTCCGCTGAAGGTCGTCAGCTTCGCGGACGGTGACGGCGA CCCGCTCGAAACGGTGACGCTCGACGACGTCGAGATCGACGTCGCGTTTCCCGCCCGCTTCTTCGCGCCCTGA
Upstream 100 bases:
>100_bases AGCCCGGTCGCTTCGCCTACTATTGCACGCATCGGCTGCTGTTCTTGCGCAGCCATCGCGAACGCGGCATGGAGGGCGTG CTCGACGTCGAGGCGGCGCC
Downstream 100 bases:
>100_bases TCCCTCATCCCTGATTCCTGATCCCGACTCATGCCGGAGGCTGCATGGCGGAATACCGGTTTTCGACGACGTGGCGCGTG GACGCGCCGCTCACGGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MIAALLAASLIGASMTADPVTVAQAHFDQVRSYRATIRSSARSGERTEFHYAYLKPGFVRMDFVSPHRGAVLAYDPGDGK VRLRPFGEHAPPALRLSPTNPLVRDRSGHRVDRSDVGELLRNVHALQQGGATVTEGEETINGRTTLRVSVTGAPAHAVDG VHRYRLWLDTEDGFPLKVVSFADGDGDPLETVTLDDVEIDVAFPARFFAP
Sequences:
>Translated_210_residues MIAALLAASLIGASMTADPVTVAQAHFDQVRSYRATIRSSARSGERTEFHYAYLKPGFVRMDFVSPHRGAVLAYDPGDGK VRLRPFGEHAPPALRLSPTNPLVRDRSGHRVDRSDVGELLRNVHALQQGGATVTEGEETINGRTTLRVSVTGAPAHAVDG VHRYRLWLDTEDGFPLKVVSFADGDGDPLETVTLDDVEIDVAFPARFFAP >Mature_210_residues MIAALLAASLIGASMTADPVTVAQAHFDQVRSYRATIRSSARSGERTEFHYAYLKPGFVRMDFVSPHRGAVLAYDPGDGK VRLRPFGEHAPPALRLSPTNPLVRDRSGHRVDRSDVGELLRNVHALQQGGATVTEGEETINGRTTLRVSVTGAPAHAVDG VHRYRLWLDTEDGFPLKVVSFADGDGDPLETVTLDDVEIDVAFPARFFAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22831; Mature: 22831
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAALLAASLIGASMTADPVTVAQAHFDQVRSYRATIRSSARSGERTEFHYAYLKPGFVR CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEE MDFVSPHRGAVLAYDPGDGKVRLRPFGEHAPPALRLSPTNPLVRDRSGHRVDRSDVGELL EEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCEECCCCCCCCHHHHHHHH RNVHALQQGGATVTEGEETINGRTTLRVSVTGAPAHAVDGVHRYRLWLDTEDGFPLKVVS HHHHHHHHCCCEEECCCCCCCCEEEEEEEEECCCHHHHCCCEEEEEEEECCCCCCEEEEE FADGDGDPLETVTLDDVEIDVAFPARFFAP ECCCCCCCEEEEEECCEEEEEECCHHHCCC >Mature Secondary Structure MIAALLAASLIGASMTADPVTVAQAHFDQVRSYRATIRSSARSGERTEFHYAYLKPGFVR CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEE MDFVSPHRGAVLAYDPGDGKVRLRPFGEHAPPALRLSPTNPLVRDRSGHRVDRSDVGELL EEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCEECCCCCCCCHHHHHHHH RNVHALQQGGATVTEGEETINGRTTLRVSVTGAPAHAVDGVHRYRLWLDTEDGFPLKVVS HHHHHHHHCCCEEECCCCCCCCEEEEEEEEECCCHHHHCCCEEEEEEEECCCCCCEEEEE FADGDGDPLETVTLDDVEIDVAFPARFFAP ECCCCCCCEEEEEECCEEEEEECCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA