Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is recG [H]

Identifier: 115350668

GI number: 115350668

Start: 686999

End: 689356

Strand: Direct

Name: recG [H]

Synonym: Bamb_0614

Alternate gene names: 115350668

Gene position: 686999-689356 (Clockwise)

Preceding gene: 115350662

Following gene: 115350669

Centisome position: 19.32

GC content: 71.84

Gene sequence:

>2358_bases
ATGCCTGTGTCACCACGCCGTTCCTCCGCCGCCGTTGCCGATTCCGCCGATCCGTTCGACGCGGACGATGCCGCGTTACC
CGCGCGAAGCGCGGGGGAGCGCGACTCCGACGCGCGCGCGGCGCCGAAGCGTGCGGGGCCGAAGCGCGGCGCCGACGGGC
GGCTCGCGCAGCCGGCCGCCGCCGCGCCCGACGTCGAACCGGGCGCCGGCAGCGACGAGGCGGGCGTTGCGGCGGCATCG
GGCGCGTCCGATGCATCCGGCGCGAAGCGCAAGAAGAAGCCGGCCGCCGACAAACCCGTGAAGACCGCCGACAAGCTCGC
GAAGCTCGGCCTCACGCGCTCGATCGATCTCGTGCTGCATCTGCCGATGCGCTACGAGGACGAAACCACGCTCACGCCGA
TCGGCGAACTGCTGCCGGGCGGCATCGCGCAGACCGAAGGCGTCGTGTTCGACAACGAAGTCGCGTACCGGCCGCGCCGC
CAGCTCGTCGTGAAGATCCAGGACGACGACGGCGAGCAGCTCGTGCTGCGCTTCCTGAATTTCTACGGCTCGCAGGTCAA
GCAGATGGCCGTCGGCCAGCGGCTGCGCGTGCGCGGCGATGTGCGCGGCGGCTTCTTCGGGATGGAGATGGTGCATCCGG
CCGTGCGCGTGGTCGAAGTCGATGCGCCGCTGCCGCAGGTGCTCACGCCCGTCTATCCGAGCACGGCCGGCGTGTCGCAG
GCGTATCTGCGCAAGGCGATCGAGAACGCGGTCGAGCGCACGCCGTTGCCCGAGCTGCTGCCGCCCGAGATCGAGCGCGA
CTACCTGAAGCCGCTCGGCGTGCCGACGCTCGCGCAGGCCGTGCGGATCCTGCATCACCCGGGCGTCGATTCCGACGAAG
CCGCGCTGATGGACGGCTCGCATCCGGCGTGGACGCGCATCAAGTTCGAGGAGCTGCTCGCGCAGCAGCTGTCGCTCAAG
CGCGCGCACGAGGAGCGCCGCACGCGCACGGCGCCCGCGATGCCGCGTCGCGCCGCGACCGATGCCGACGCGCTGACCAC
GCGCCTCTACGCGGCGCTGCCGTTCACGCTGACGGGCGCGCAGGCGCGCGTCGTCGACGAGATCGCGCACGACCTCACGC
TTCCGCATCCGATGCAGCGGCTGTTGCAGGGCGACGTCGGCAGCGGCAAGACGGTCGTCGCCGCGCTGGCCGCGACGCAG
GCGATCGATGCCGGCTACCAGGCCGCGCTGATGGCGCCGACCGAAATCCTCGCTGAGCAGCACGCCCGCAAGCTGCGCGC
GTGGCTCGAGCCGCTCGGCGTGTCGGTCGCGTGGCTCGCGGGCAGCCTGAAGGCGAAGGAGAAGCGCGCGGCGATCGAGG
CCGCGGCGCTCGGCACCGCGCAGCTCGTGATCGGCACGCACGCGATCATCCAGGACACGGTCGAATTCGCGCGGCTCGGC
CTCGTGATCGTCGACGAGCAGCACCGCTTCGGCGTCGAGCAGCGTCTCGCGCTGCGGGCGAAGGCCGCGAATGCGGCCAA
CGGCGCGCGCGATTTCCAGCCGCACCAGCTGATGATGTCGGCCACGCCGATTCCGCGCACGCTCGCGATGACGTATTACG
CGGATCTCGAGGTGTCGACGATCGACGAGCTGCCTCCGGGCCGCACGCCGGTGCTGACGCGCCTCGTCGGCGACGCGCGG
CGCGAGGAGGTGATCGCGCGCGTGCGCGAGGCCGCGCTGACTGGCCGCCAGGTGTACTGGGTGTGTCCGCTGATCGAGGA
GAGCGAGACGCTGCAGTTGCAGACGGCCGTCGAAACCTACGAGACGCTGGCCGCGGCCCTGCCCGAGTTGAAGGTCGGGC
TCGTGCACGGCAGGCTGTCGCCGGCCGACAAGGCGGCCGTGATGGAAGCCTTCACGCGCAACGAGGTGCAGCTGCTCGTC
GCGACGACCGTGATCGAGGTCGGCGTCGACGTGCCGAACGCGTCGCTTATGGTGATCGAGCACGCGGAGCGCTTCGGCCT
CGCGCAACTGCACCAGCTGCGCGGCCGGGTCGGGCGCGGCACCGCGGCATCGGTGTGCGTGCTGCTGTACACGGGCCCGC
TGTCGCTCACCGGCCGCGAGCGGCTGAAGACGATGCGCGAGACGACCGACGGCTTCGAGATCGCGCGGCGCGACCTCGAG
ATCCGCGGCCCCGGCGAATTCCTCGGCGCGCGCCAGTCGGGCGCGGCGATGCTGCGCTTCGCGAACCTCGAGACCGACGG
CTGGCTGATCGACCCGGCCCGCGACGCGGCGGCGCGGCTGATCGCCGCGTATCCCGACGTCGTCACGCAGCATCTCGCCC
GCTGGCTCGGCGCGCGGGAGCAGTATCTGAAGGCGTGA

Upstream 100 bases:

>100_bases
GCCGCTATGATGGCGGGATGCGCGGCCTGGCCGGCGTCGTTCGTTCGGACGACGTGAAAGCCGCTATTGTACTTGCCTTG
CGAAGCACCCAGACGATCCG

Downstream 100 bases:

>100_bases
TCGACGTATTGAGGGCTAGACCGGAAATCGAAATTCGCCGCGCTTCGGCGCATTGCAATACTGAGAAACTTGGCGAATCG
GTCCCAGTGGGTGTATAAAT

Product: ATP-dependent DNA helicase RecG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 785; Mature: 784

Protein sequence:

>785_residues
MPVSPRRSSAAVADSADPFDADDAALPARSAGERDSDARAAPKRAGPKRGADGRLAQPAAAAPDVEPGAGSDEAGVAAAS
GASDASGAKRKKKPAADKPVKTADKLAKLGLTRSIDLVLHLPMRYEDETTLTPIGELLPGGIAQTEGVVFDNEVAYRPRR
QLVVKIQDDDGEQLVLRFLNFYGSQVKQMAVGQRLRVRGDVRGGFFGMEMVHPAVRVVEVDAPLPQVLTPVYPSTAGVSQ
AYLRKAIENAVERTPLPELLPPEIERDYLKPLGVPTLAQAVRILHHPGVDSDEAALMDGSHPAWTRIKFEELLAQQLSLK
RAHEERRTRTAPAMPRRAATDADALTTRLYAALPFTLTGAQARVVDEIAHDLTLPHPMQRLLQGDVGSGKTVVAALAATQ
AIDAGYQAALMAPTEILAEQHARKLRAWLEPLGVSVAWLAGSLKAKEKRAAIEAAALGTAQLVIGTHAIIQDTVEFARLG
LVIVDEQHRFGVEQRLALRAKAANAANGARDFQPHQLMMSATPIPRTLAMTYYADLEVSTIDELPPGRTPVLTRLVGDAR
REEVIARVREAALTGRQVYWVCPLIEESETLQLQTAVETYETLAAALPELKVGLVHGRLSPADKAAVMEAFTRNEVQLLV
ATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAASVCVLLYTGPLSLTGRERLKTMRETTDGFEIARRDLE
IRGPGEFLGARQSGAAMLRFANLETDGWLIDPARDAAARLIAAYPDVVTQHLARWLGAREQYLKA

Sequences:

>Translated_785_residues
MPVSPRRSSAAVADSADPFDADDAALPARSAGERDSDARAAPKRAGPKRGADGRLAQPAAAAPDVEPGAGSDEAGVAAAS
GASDASGAKRKKKPAADKPVKTADKLAKLGLTRSIDLVLHLPMRYEDETTLTPIGELLPGGIAQTEGVVFDNEVAYRPRR
QLVVKIQDDDGEQLVLRFLNFYGSQVKQMAVGQRLRVRGDVRGGFFGMEMVHPAVRVVEVDAPLPQVLTPVYPSTAGVSQ
AYLRKAIENAVERTPLPELLPPEIERDYLKPLGVPTLAQAVRILHHPGVDSDEAALMDGSHPAWTRIKFEELLAQQLSLK
RAHEERRTRTAPAMPRRAATDADALTTRLYAALPFTLTGAQARVVDEIAHDLTLPHPMQRLLQGDVGSGKTVVAALAATQ
AIDAGYQAALMAPTEILAEQHARKLRAWLEPLGVSVAWLAGSLKAKEKRAAIEAAALGTAQLVIGTHAIIQDTVEFARLG
LVIVDEQHRFGVEQRLALRAKAANAANGARDFQPHQLMMSATPIPRTLAMTYYADLEVSTIDELPPGRTPVLTRLVGDAR
REEVIARVREAALTGRQVYWVCPLIEESETLQLQTAVETYETLAAALPELKVGLVHGRLSPADKAAVMEAFTRNEVQLLV
ATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAASVCVLLYTGPLSLTGRERLKTMRETTDGFEIARRDLE
IRGPGEFLGARQSGAAMLRFANLETDGWLIDPARDAAARLIAAYPDVVTQHLARWLGAREQYLKA
>Mature_784_residues
PVSPRRSSAAVADSADPFDADDAALPARSAGERDSDARAAPKRAGPKRGADGRLAQPAAAAPDVEPGAGSDEAGVAAASG
ASDASGAKRKKKPAADKPVKTADKLAKLGLTRSIDLVLHLPMRYEDETTLTPIGELLPGGIAQTEGVVFDNEVAYRPRRQ
LVVKIQDDDGEQLVLRFLNFYGSQVKQMAVGQRLRVRGDVRGGFFGMEMVHPAVRVVEVDAPLPQVLTPVYPSTAGVSQA
YLRKAIENAVERTPLPELLPPEIERDYLKPLGVPTLAQAVRILHHPGVDSDEAALMDGSHPAWTRIKFEELLAQQLSLKR
AHEERRTRTAPAMPRRAATDADALTTRLYAALPFTLTGAQARVVDEIAHDLTLPHPMQRLLQGDVGSGKTVVAALAATQA
IDAGYQAALMAPTEILAEQHARKLRAWLEPLGVSVAWLAGSLKAKEKRAAIEAAALGTAQLVIGTHAIIQDTVEFARLGL
VIVDEQHRFGVEQRLALRAKAANAANGARDFQPHQLMMSATPIPRTLAMTYYADLEVSTIDELPPGRTPVLTRLVGDARR
EEVIARVREAALTGRQVYWVCPLIEESETLQLQTAVETYETLAAALPELKVGLVHGRLSPADKAAVMEAFTRNEVQLLVA
TTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAASVCVLLYTGPLSLTGRERLKTMRETTDGFEIARRDLEI
RGPGEFLGARQSGAAMLRFANLETDGWLIDPARDAAARLIAAYPDVVTQHLARWLGAREQYLKA

Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup

COG id: COG1200

COG function: function code LK; RecG-like helicase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI2367254, Length=691, Percent_Identity=53.1114327062229, Blast_Score=645, Evalue=0.0,
Organism=Escherichia coli, GI1787357, Length=393, Percent_Identity=38.4223918575064, Blast_Score=231, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR004609
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR016027
- InterPro:   IPR004365 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 84715; Mature: 84584

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVSPRRSSAAVADSADPFDADDAALPARSAGERDSDARAAPKRAGPKRGADGRLAQPAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC
AAPDVEPGAGSDEAGVAAASGASDASGAKRKKKPAADKPVKTADKLAKLGLTRSIDLVLH
CCCCCCCCCCCCCCCCEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEE
LPMRYEDETTLTPIGELLPGGIAQTEGVVFDNEVAYRPRRQLVVKIQDDDGEQLVLRFLN
CCCCCCCCCCCCCHHHHCCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCHHHHHHHHHH
FYGSQVKQMAVGQRLRVRGDVRGGFFGMEMVHPAVRVVEVDAPLPQVLTPVYPSTAGVSQ
HHHHHHHHHHHCCHHEEEECCCCCEEHHHHHCCCEEEEECCCCCHHHHCCCCCCCCCHHH
AYLRKAIENAVERTPLPELLPPEIERDYLKPLGVPTLAQAVRILHHPGVDSDEAALMDGS
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEECCC
HPAWTRIKFEELLAQQLSLKRAHEERRTRTAPAMPRRAATDADALTTRLYAALPFTLTGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCEEECCC
QARVVDEIAHDLTLPHPMQRLLQGDVGSGKTVVAALAATQAIDAGYQAALMAPTEILAEQ
HHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEECCCHHHHHHHH
HARKLRAWLEPLGVSVAWLAGSLKAKEKRAAIEAAALGTAQLVIGTHAIIQDTVEFARLG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
LVIVDEQHRFGVEQRLALRAKAANAANGARDFQPHQLMMSATPIPRTLAMTYYADLEVST
EEEEECHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHEEEECCCCCHHEEEEEEECCEEEH
IDELPPGRTPVLTRLVGDARREEVIARVREAALTGRQVYWVCPLIEESETLQLQTAVETY
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEECCCCCEEHHHHHHHH
ETLAAALPELKVGLVHGRLSPADKAAVMEAFTRNEVQLLVATTVIEVGVDVPNASLMVIE
HHHHHHCCHHHEEEEECCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCEEEEE
HAERFGLAQLHQLRGRVGRGTAASVCVLLYTGPLSLTGRERLKTMRETTDGFEIARRDLE
CHHHCCHHHHHHHHHCCCCCCHHHEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHCCE
IRGPGEFLGARQSGAAMLRFANLETDGWLIDPARDAAARLIAAYPDVVTQHLARWLGARE
ECCCHHHHCCCCCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHH
QYLKA
HHHCC
>Mature Secondary Structure 
PVSPRRSSAAVADSADPFDADDAALPARSAGERDSDARAAPKRAGPKRGADGRLAQPAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC
AAPDVEPGAGSDEAGVAAASGASDASGAKRKKKPAADKPVKTADKLAKLGLTRSIDLVLH
CCCCCCCCCCCCCCCCEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEE
LPMRYEDETTLTPIGELLPGGIAQTEGVVFDNEVAYRPRRQLVVKIQDDDGEQLVLRFLN
CCCCCCCCCCCCCHHHHCCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCHHHHHHHHHH
FYGSQVKQMAVGQRLRVRGDVRGGFFGMEMVHPAVRVVEVDAPLPQVLTPVYPSTAGVSQ
HHHHHHHHHHHCCHHEEEECCCCCEEHHHHHCCCEEEEECCCCCHHHHCCCCCCCCCHHH
AYLRKAIENAVERTPLPELLPPEIERDYLKPLGVPTLAQAVRILHHPGVDSDEAALMDGS
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEECCC
HPAWTRIKFEELLAQQLSLKRAHEERRTRTAPAMPRRAATDADALTTRLYAALPFTLTGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCEEECCC
QARVVDEIAHDLTLPHPMQRLLQGDVGSGKTVVAALAATQAIDAGYQAALMAPTEILAEQ
HHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEECCCHHHHHHHH
HARKLRAWLEPLGVSVAWLAGSLKAKEKRAAIEAAALGTAQLVIGTHAIIQDTVEFARLG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
LVIVDEQHRFGVEQRLALRAKAANAANGARDFQPHQLMMSATPIPRTLAMTYYADLEVST
EEEEECHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHEEEECCCCCHHEEEEEEECCEEEH
IDELPPGRTPVLTRLVGDARREEVIARVREAALTGRQVYWVCPLIEESETLQLQTAVETY
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEECCCCCEEHHHHHHHH
ETLAAALPELKVGLVHGRLSPADKAAVMEAFTRNEVQLLVATTVIEVGVDVPNASLMVIE
HHHHHHCCHHHEEEEECCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCEEEEE
HAERFGLAQLHQLRGRVGRGTAASVCVLLYTGPLSLTGRERLKTMRETTDGFEIARRDLE
CHHHCCHHHHHHHHHCCCCCCHHHEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHCCE
IRGPGEFLGARQSGAAMLRFANLETDGWLIDPARDAAARLIAAYPDVVTQHLARWLGARE
ECCCHHHHCCCCCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHH
QYLKA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]