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The map label for this gene is yegD [H]

Identifier: 115350461

GI number: 115350461

Start: 457119

End: 458426

Strand: Direct

Name: yegD [H]

Synonym: Bamb_0407

Alternate gene names: 115350461

Gene position: 457119-458426 (Clockwise)

Preceding gene: 115350460

Following gene: 115350463

Centisome position: 12.85

GC content: 69.11

Gene sequence:

>1308_bases
ATGTTAAAAAGCCCGTCCTTTCCGTTTTCCGCGCCGGCCATGCTGCGGCACCTTCCGATGACTTACTGCGCGATCGATTT
CGGCACGTCCAATTCCGCCGTGGCGCTGCCCGACGGCGATGGAATGCGCCTCGCGCCCGTCGAGGGCGACCACCTGACGC
TGCCCACCGCGATCTTCTTCAACAACGACGAGCAGACGGTCGAATACGGCCGGGCCGCGCTCGCGTCGTATATCGACGGT
TTCGACGGCCGGCTGATGCGCTCGATGAAGAGCATCCTCGGCTCGCCGCTCGCGGAAACCACGACCGATCTCGGCGACGG
CAGCGCGATGGCGTACACGGAGATCATCGCGCGCTTCCTGACGCACCTGAAGCGCAAGGCCGAGGCACGCGCGGGCGCGC
CGATCGGCCGTGCGGTGCTCGGCCGGCCGGTGTTCTTCGTCGACGAGGATCCGCGCGCCGACCGCCTCGCGCAGGACCAG
CTCGAAGCGGCCGCGCGGTCGGTCGGTTTCACCGACGTGCATTTCCAGTACGAACCGATCGCGGCCGCGTTCGACTACGA
GTCGCGCCAGCAGGCCGAACGGCTCGTGCTGGTTGCCGACATCGGCGGCGGTACGTCGGACTTCTCGCTCGTGCGGGTCG
GGCCGCAGCGGATGGCGCGCCTCGAGCGCAAGGACGACGTGCTCGCGCACCACGGCGTGCACGTCGCCGGCACCGACTAC
GACCGCCGCGTCGAACTGGCGGCGATCCTGCCGGCGTTCGGCTATCGCGCGCTCGATCCCGAGGGGCGCGAGCTGCCGAA
CCGGATCTACTTCGACCTGGCGACCTGGCACCTGATCAACACGGTCTACACGCCGAAGCGGCTGGGCGAGCTGAAGCTGA
TGAAGCACCTGTACCAGGATGGGCGGCAGTACGACCGGCTCACCCGCGTGGTCGAGCAGCGGCTCGGGCATGCGCTGATG
GCACGCGCGGAAGAGGCGAAGATCGGCGTGGCGGCGGGCGGGGAGACGATGATCGACCTGAACGACGTGGAAGAGGATCT
GCAGATCGCGTTCGACGCCGAACGCCTCGTCAAGGCGAGCGTCGACGACACCGCGCGCATCGTCGACGCCGCGCGCGAAA
CGGTGCGGCTCGCGGGCGTTGCGCCGCGCGACCTCGGCGCGCTGTATTTCACCGGCGGCTCGACCGGGCTCGCGTTTCTG
TCGGGTGCGCTCGCCGGCGCATTTCCGGACGCGCAGCCGGTGTTCGGCGATCGCCTCGCCAGCGTCGCGACGGGGCTCGG
CATTCACGCGCAGCGGCTGTTCGGCTGA

Upstream 100 bases:

>100_bases
CTGTCGCCCCTGACGCGCCTGCCGGCGCGCCCCATCCCCGCCCCTCCGGGCCGGTTGCACCGTACCGCTGGCCGGCCCCG
GTTGTGATCCGGCGGGCTTC

Downstream 100 bases:

>100_bases
ACGAAGATAAGCCGAACGTGCGGCAGCCGAATCGCTGCCGCGCCATAAAACAAAAAGCCCCGCCGAAGCGGGGCTTTTTT
ACACGAATTAATCGCGCCGA

Product: molecular chaperone-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MLKSPSFPFSAPAMLRHLPMTYCAIDFGTSNSAVALPDGDGMRLAPVEGDHLTLPTAIFFNNDEQTVEYGRAALASYIDG
FDGRLMRSMKSILGSPLAETTTDLGDGSAMAYTEIIARFLTHLKRKAEARAGAPIGRAVLGRPVFFVDEDPRADRLAQDQ
LEAAARSVGFTDVHFQYEPIAAAFDYESRQQAERLVLVADIGGGTSDFSLVRVGPQRMARLERKDDVLAHHGVHVAGTDY
DRRVELAAILPAFGYRALDPEGRELPNRIYFDLATWHLINTVYTPKRLGELKLMKHLYQDGRQYDRLTRVVEQRLGHALM
ARAEEAKIGVAAGGETMIDLNDVEEDLQIAFDAERLVKASVDDTARIVDAARETVRLAGVAPRDLGALYFTGGSTGLAFL
SGALAGAFPDAQPVFGDRLASVATGLGIHAQRLFG

Sequences:

>Translated_435_residues
MLKSPSFPFSAPAMLRHLPMTYCAIDFGTSNSAVALPDGDGMRLAPVEGDHLTLPTAIFFNNDEQTVEYGRAALASYIDG
FDGRLMRSMKSILGSPLAETTTDLGDGSAMAYTEIIARFLTHLKRKAEARAGAPIGRAVLGRPVFFVDEDPRADRLAQDQ
LEAAARSVGFTDVHFQYEPIAAAFDYESRQQAERLVLVADIGGGTSDFSLVRVGPQRMARLERKDDVLAHHGVHVAGTDY
DRRVELAAILPAFGYRALDPEGRELPNRIYFDLATWHLINTVYTPKRLGELKLMKHLYQDGRQYDRLTRVVEQRLGHALM
ARAEEAKIGVAAGGETMIDLNDVEEDLQIAFDAERLVKASVDDTARIVDAARETVRLAGVAPRDLGALYFTGGSTGLAFL
SGALAGAFPDAQPVFGDRLASVATGLGIHAQRLFG
>Mature_435_residues
MLKSPSFPFSAPAMLRHLPMTYCAIDFGTSNSAVALPDGDGMRLAPVEGDHLTLPTAIFFNNDEQTVEYGRAALASYIDG
FDGRLMRSMKSILGSPLAETTTDLGDGSAMAYTEIIARFLTHLKRKAEARAGAPIGRAVLGRPVFFVDEDPRADRLAQDQ
LEAAARSVGFTDVHFQYEPIAAAFDYESRQQAERLVLVADIGGGTSDFSLVRVGPQRMARLERKDDVLAHHGVHVAGTDY
DRRVELAAILPAFGYRALDPEGRELPNRIYFDLATWHLINTVYTPKRLGELKLMKHLYQDGRQYDRLTRVVEQRLGHALM
ARAEEAKIGVAAGGETMIDLNDVEEDLQIAFDAERLVKASVDDTARIVDAARETVRLAGVAPRDLGALYFTGGSTGLAFL
SGALAGAFPDAQPVFGDRLASVATGLGIHAQRLFG

Specific function: Unknown

COG id: COG0443

COG function: function code O; Molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heat shock protein 70 family [H]

Homologues:

Organism=Escherichia coli, GI87082035, Length=465, Percent_Identity=29.4623655913978, Blast_Score=173, Evalue=2e-44,
Organism=Escherichia coli, GI1786196, Length=245, Percent_Identity=30.2040816326531, Blast_Score=76, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018181
- InterPro:   IPR001023
- InterPro:   IPR013126 [H]

Pfam domain/function: PF00012 HSP70 [H]

EC number: NA

Molecular weight: Translated: 47352; Mature: 47352

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSPSFPFSAPAMLRHLPMTYCAIDFGTSNSAVALPDGDGMRLAPVEGDHLTLPTAIFF
CCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCEEECCCCCCCEEEECCCCCEEECEEEEE
NNDEQTVEYGRAALASYIDGFDGRLMRSMKSILGSPLAETTTDLGDGSAMAYTEIIARFL
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHH
THLKRKAEARAGAPIGRAVLGRPVFFVDEDPRADRLAQDQLEAAARSVGFTDVHFQYEPI
HHHHHHHHHHCCCCCCHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCC
AAAFDYESRQQAERLVLVADIGGGTSDFSLVRVGPQRMARLERKDDVLAHHGVHVAGTDY
CEECCCHHHHHHCEEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCEEEECCCC
DRRVELAAILPAFGYRALDPEGRELPNRIYFDLATWHLINTVYTPKRLGELKLMKHLYQD
CHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
GRQYDRLTRVVEQRLGHALMARAEEAKIGVAAGGETMIDLNDVEEDLQIAFDAERLVKAS
CHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEHHHHHHHHHHHHCHHHHHHHC
VDDTARIVDAARETVRLAGVAPRDLGALYFTGGSTGLAFLSGALAGAFPDAQPVFGDRLA
CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHH
SVATGLGIHAQRLFG
HHHHCCCHHHHHHCC
>Mature Secondary Structure
MLKSPSFPFSAPAMLRHLPMTYCAIDFGTSNSAVALPDGDGMRLAPVEGDHLTLPTAIFF
CCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCEEECCCCCCCEEEECCCCCEEECEEEEE
NNDEQTVEYGRAALASYIDGFDGRLMRSMKSILGSPLAETTTDLGDGSAMAYTEIIARFL
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHH
THLKRKAEARAGAPIGRAVLGRPVFFVDEDPRADRLAQDQLEAAARSVGFTDVHFQYEPI
HHHHHHHHHHCCCCCCHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCC
AAAFDYESRQQAERLVLVADIGGGTSDFSLVRVGPQRMARLERKDDVLAHHGVHVAGTDY
CEECCCHHHHHHCEEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCEEEECCCC
DRRVELAAILPAFGYRALDPEGRELPNRIYFDLATWHLINTVYTPKRLGELKLMKHLYQD
CHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
GRQYDRLTRVVEQRLGHALMARAEEAKIGVAAGGETMIDLNDVEEDLQIAFDAERLVKAS
CHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEHHHHHHHHHHHHCHHHHHHHC
VDDTARIVDAARETVRLAGVAPRDLGALYFTGGSTGLAFLSGALAGAFPDAQPVFGDRLA
CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHH
SVATGLGIHAQRLFG
HHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 6094528; 7940673; 7984428 [H]