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The map label for this gene is ybeC [H]

Identifier: 115350463

GI number: 115350463

Start: 459153

End: 460751

Strand: Direct

Name: ybeC [H]

Synonym: Bamb_0409

Alternate gene names: 115350463

Gene position: 459153-460751 (Clockwise)

Preceding gene: 115350461

Following gene: 115350471

Centisome position: 12.91

GC content: 63.66

Gene sequence:

>1599_bases
GTGAAGAGTTCTATTCAACGGAACATCGGCCCGTTTGCACTGATGCTGACGGGCCTGGGTTCGATTATCGGCTCGGGCTG
GCTGTTCGGCGCCTGGAAGGCCGCGAAGATCGCCGGTCCGGCGGCGATCTGCGCATGGATCATCGGCGCGGTCGTGATTC
TCGCGATTGCCCTCACGTACGCCGAACTGGGCGCGATGTTCCCCGAGTCCGGCGGCATGGTGCGCTATGCGCGCTACTCG
CACGGTTCGCTGGTGGGCTTCATCAGCGCATGGGCGAACTGGATCGCGATCGTCTCGGTGATTCCGATCGAGGCGGAAGC
GTCGATCCAGTACATGAGCACGTGGCCGTATCCATGGGCGCACGCGTTGTTCGTGAACGGCGAGTTGACGACACCAGGCC
TGCTGCTGTCGGCCGTGCTGGTGGTCATCTATTTCATGCTGAACTACTGGGGCGTCAAGGCCTTCGCGCGGGCAAACACC
GCGATCACTATCTTCAAGTTCCTGATCCCCGGCCTCACGATCCTCGGCCTGATGCTCGCGAGCTTCCACTCGGAGAACCT
CGGCACCGCATCGAACGCGAGCTTCGCGCCGTACGGCTGGTCGGCCGTGCTGACCGCGGTCTCGACGAGCGGCATCGTGT
TCGCGTTCAACGGCTTCCAGAGCCCGGTGAACCTGGCCGGCGAAGCGCGCGATCCGTCGCGCAGCGTGCCGTTCGCGGTG
ATCACGTCGATCCTGCTCGCACTCGTGATCTATGTGCTGCTGCAGATGGCCTACATCGGCTCGGTGAATCCGGTCGACGT
CGCGAAGGGCTGGGAGCACTTCAACTTCTCGTCGCCGTTCGCGGAACTCGCGATCGCGCTGAACCTGAACTGGCTCGCGA
TCCTGCTGTATGTCGACGCGTTCGTCAGCCCGAGCGGTACCGGCACGACCTACATGGCGACGACCACCCGGATGATCTAC
GCGATGGAGCGCAACAACACGATGCCGAAGATGTTCGGCAACGTGCACCCCATCTACGGCGTGCCGCGCCAGGCGATGTG
GTTCAACCTGCTCGTGTCGTTCGTCTTCCTGTTCTTCTTCCGCGGCTGGAGCTCGCTCGCGGCGGTGATCTCGGTGGCGA
CGGTGATTTCGTACCTGACCGGCCCGATCAGCCTGATGGCGTTGCGCCGCGCGGCGACCGACATCGAGCGTCCGCTGTCG
ATTCCGCTGATGAAGCTGATCGCGCCGTTCGCGTTCGTCTGCGCGTCGTTGATCCTGTACTGGGCGAAGTGGCCGCTGAC
CGGCGAAATCATCCTGCTGATGATCGTCGCGCTGCCGGTGTACTTCTTCTTCCAGGCCAAGTCCGGCTGGAGCGGCTGGG
GCGCCGACCTGAAGGCCGCATGGTGGCTGGTCGCGTACCTGCCGACGATGGCCGTGCTGTCGCTGATCGGCAGCAAGGAG
TTCGGCGGCCATGGTCTGATGCCGTACGGCTGGGACATGGTGATCGTCGCGGCGATCTCGCTGGTGTTCTACTTCTGGGG
CGTGAACACGGGCTACCGGACGCAATATCTCGACGAGCGCGAAGCGCACGACGAGATCCTCGAAGGGGTCGGTGTCTGA

Upstream 100 bases:

>100_bases
CTGATCGGGTAATCCCTTCCCCCAAAATGACGCGCGCGGTGCTGTCCGAGCCGATCCCGGACAGCTGGCCGACCACGCTT
TTTGAGACACAGGAGAGGAT

Downstream 100 bases:

>100_bases
GGCCTGACCTGCCACCGGAATCGGCGGTGGCGGAAAGCGCATAAAAGCCCGTCCGAGCGATGCTCGGGCGGGCTTTTTGT
TTGGGGCGCGCCGGTTGTGC

Product: amino acid permease-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MKSSIQRNIGPFALMLTGLGSIIGSGWLFGAWKAAKIAGPAAICAWIIGAVVILAIALTYAELGAMFPESGGMVRYARYS
HGSLVGFISAWANWIAIVSVIPIEAEASIQYMSTWPYPWAHALFVNGELTTPGLLLSAVLVVIYFMLNYWGVKAFARANT
AITIFKFLIPGLTILGLMLASFHSENLGTASNASFAPYGWSAVLTAVSTSGIVFAFNGFQSPVNLAGEARDPSRSVPFAV
ITSILLALVIYVLLQMAYIGSVNPVDVAKGWEHFNFSSPFAELAIALNLNWLAILLYVDAFVSPSGTGTTYMATTTRMIY
AMERNNTMPKMFGNVHPIYGVPRQAMWFNLLVSFVFLFFFRGWSSLAAVISVATVISYLTGPISLMALRRAATDIERPLS
IPLMKLIAPFAFVCASLILYWAKWPLTGEIILLMIVALPVYFFFQAKSGWSGWGADLKAAWWLVAYLPTMAVLSLIGSKE
FGGHGLMPYGWDMVIVAAISLVFYFWGVNTGYRTQYLDEREAHDEILEGVGV

Sequences:

>Translated_532_residues
MKSSIQRNIGPFALMLTGLGSIIGSGWLFGAWKAAKIAGPAAICAWIIGAVVILAIALTYAELGAMFPESGGMVRYARYS
HGSLVGFISAWANWIAIVSVIPIEAEASIQYMSTWPYPWAHALFVNGELTTPGLLLSAVLVVIYFMLNYWGVKAFARANT
AITIFKFLIPGLTILGLMLASFHSENLGTASNASFAPYGWSAVLTAVSTSGIVFAFNGFQSPVNLAGEARDPSRSVPFAV
ITSILLALVIYVLLQMAYIGSVNPVDVAKGWEHFNFSSPFAELAIALNLNWLAILLYVDAFVSPSGTGTTYMATTTRMIY
AMERNNTMPKMFGNVHPIYGVPRQAMWFNLLVSFVFLFFFRGWSSLAAVISVATVISYLTGPISLMALRRAATDIERPLS
IPLMKLIAPFAFVCASLILYWAKWPLTGEIILLMIVALPVYFFFQAKSGWSGWGADLKAAWWLVAYLPTMAVLSLIGSKE
FGGHGLMPYGWDMVIVAAISLVFYFWGVNTGYRTQYLDEREAHDEILEGVGV
>Mature_532_residues
MKSSIQRNIGPFALMLTGLGSIIGSGWLFGAWKAAKIAGPAAICAWIIGAVVILAIALTYAELGAMFPESGGMVRYARYS
HGSLVGFISAWANWIAIVSVIPIEAEASIQYMSTWPYPWAHALFVNGELTTPGLLLSAVLVVIYFMLNYWGVKAFARANT
AITIFKFLIPGLTILGLMLASFHSENLGTASNASFAPYGWSAVLTAVSTSGIVFAFNGFQSPVNLAGEARDPSRSVPFAV
ITSILLALVIYVLLQMAYIGSVNPVDVAKGWEHFNFSSPFAELAIALNLNWLAILLYVDAFVSPSGTGTTYMATTTRMIY
AMERNNTMPKMFGNVHPIYGVPRQAMWFNLLVSFVFLFFFRGWSSLAAVISVATVISYLTGPISLMALRRAATDIERPLS
IPLMKLIAPFAFVCASLILYWAKWPLTGEIILLMIVALPVYFFFQAKSGWSGWGADLKAAWWLVAYLPTMAVLSLIGSKE
FGGHGLMPYGWDMVIVAAISLVFYFWGVNTGYRTQYLDEREAHDEILEGVGV

Specific function: Uptake of an yet unknown amino-acid with the concomitant import of a proton [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. AGT (TC 2.A.3.11) family [H]

Homologues:

Organism=Homo sapiens, GI4507047, Length=423, Percent_Identity=23.1678486997636, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI110347453, Length=360, Percent_Identity=24.4444444444444, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI33286428, Length=453, Percent_Identity=23.841059602649, Blast_Score=76, Evalue=9e-14,
Organism=Homo sapiens, GI181337167, Length=256, Percent_Identity=28.90625, Blast_Score=70, Evalue=6e-12,
Organism=Escherichia coli, GI87082250, Length=471, Percent_Identity=25.4777070063694, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI1786789, Length=456, Percent_Identity=24.3421052631579, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1790653, Length=362, Percent_Identity=23.7569060773481, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1786302, Length=404, Percent_Identity=24.7524752475248, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786602, Length=367, Percent_Identity=24.5231607629428, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1788480, Length=358, Percent_Identity=24.5810055865922, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI87081708, Length=391, Percent_Identity=23.7851662404092, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1787890, Length=379, Percent_Identity=25.065963060686, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI87081915, Length=373, Percent_Identity=23.5924932975871, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI87081869, Length=302, Percent_Identity=23.841059602649, Blast_Score=62, Evalue=8e-11,
Organism=Escherichia coli, GI48994972, Length=354, Percent_Identity=24.5762711864407, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17532491, Length=410, Percent_Identity=23.4146341463415, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17531343, Length=419, Percent_Identity=22.9116945107399, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17540018, Length=446, Percent_Identity=25.7847533632287, Blast_Score=75, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI32566699, Length=364, Percent_Identity=25.2747252747253, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17533459, Length=417, Percent_Identity=23.9808153477218, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24667468, Length=420, Percent_Identity=25, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI221512776, Length=414, Percent_Identity=21.4975845410628, Blast_Score=80, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24666159, Length=414, Percent_Identity=21.4975845410628, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24651635, Length=439, Percent_Identity=23.9179954441913, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24651633, Length=439, Percent_Identity=23.9179954441913, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI21357367, Length=458, Percent_Identity=25.5458515283843, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI45550968, Length=425, Percent_Identity=24.4705882352941, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI19921172, Length=425, Percent_Identity=24.4705882352941, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 58076; Mature: 58076

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSIQRNIGPFALMLTGLGSIIGSGWLFGAWKAAKIAGPAAICAWIIGAVVILAIALTY
CCCCHHHCCCHHHHHHHHHHHHHHCCCHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AELGAMFPESGGMVRYARYSHGSLVGFISAWANWIAIVSVIPIEAEASIQYMSTWPYPWA
HHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCE
HALFVNGELTTPGLLLSAVLVVIYFMLNYWGVKAFARANTAITIFKFLIPGLTILGLMLA
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SFHSENLGTASNASFAPYGWSAVLTAVSTSGIVFAFNGFQSPVNLAGEARDPSRSVPFAV
HHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHCCCCCCCCCCCCCHHH
ITSILLALVIYVLLQMAYIGSVNPVDVAKGWEHFNFSSPFAELAIALNLNWLAILLYVDA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHH
FVSPSGTGTTYMATTTRMIYAMERNNTMPKMFGNVHPIYGVPRQAMWFNLLVSFVFLFFF
HCCCCCCCCEEEEEHHHEEEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RGWSSLAAVISVATVISYLTGPISLMALRRAATDIERPLSIPLMKLIAPFAFVCASLILY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
WAKWPLTGEIILLMIVALPVYFFFQAKSGWSGWGADLKAAWWLVAYLPTMAVLSLIGSKE
HHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
FGGHGLMPYGWDMVIVAAISLVFYFWGVNTGYRTQYLDEREAHDEILEGVGV
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSSIQRNIGPFALMLTGLGSIIGSGWLFGAWKAAKIAGPAAICAWIIGAVVILAIALTY
CCCCHHHCCCHHHHHHHHHHHHHHCCCHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AELGAMFPESGGMVRYARYSHGSLVGFISAWANWIAIVSVIPIEAEASIQYMSTWPYPWA
HHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCE
HALFVNGELTTPGLLLSAVLVVIYFMLNYWGVKAFARANTAITIFKFLIPGLTILGLMLA
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SFHSENLGTASNASFAPYGWSAVLTAVSTSGIVFAFNGFQSPVNLAGEARDPSRSVPFAV
HHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHCCCCCCCCCCCCCHHH
ITSILLALVIYVLLQMAYIGSVNPVDVAKGWEHFNFSSPFAELAIALNLNWLAILLYVDA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHH
FVSPSGTGTTYMATTTRMIYAMERNNTMPKMFGNVHPIYGVPRQAMWFNLLVSFVFLFFF
HCCCCCCCCEEEEEHHHEEEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RGWSSLAAVISVATVISYLTGPISLMALRRAATDIERPLSIPLMKLIAPFAFVCASLILY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
WAKWPLTGEIILLMIVALPVYFFFQAKSGWSGWGADLKAAWWLVAYLPTMAVLSLIGSKE
HHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
FGGHGLMPYGWDMVIVAAISLVFYFWGVNTGYRTQYLDEREAHDEILEGVGV
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 12730183 [H]