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Identifier: 11497942

GI number: 11497942

Start: 301727

End: 302209

Strand: Reverse

Name: Not Available

Synonym: AF0330

Alternate gene names: 11497942

Gene position: 302209-301727 (Counterclockwise)

Preceding gene: 11497943

Following gene: 11497938

Centisome position: 13.87

GC content: 50.72

Gene sequence:

>483_bases
ATGAAGATATACATCCAGCCTCTTTCGGTGAACAGCCACACGGTTGAGGTACTCGCAAACTCCCTCCCGAAAATTTTCAA
CGCCGAGGTTTTTGTGCTTCCGGCATCAGATGTTAGCCTTAAGTGCTACAACGCCTCCAGAAGACAGTACAACTCAACGT
GCATCCTGAGGATGCTCCCCCCGATTAAAGTTACCTTGGGTGTGACGGGTAAGGATATCTACGCCAAAGGAATGAACTTC
GTTTTTGGCGAGGCAGAACTCGGAGGGGCGAGGGCCGTGCTATCAGTTTTCCGCCTCACAACAGCGGACAGCGAGCTTTA
CAGGGAGAGGGTTGTCAAGGAGGCTGTGCACGAGATCGGCCACGTTCTTGGTTTGAAGCACTGCAGTAACAACTGCGTTA
TGCGGTTTTCAAACTCAGTTCAGGATGTTGACAGAAAGCCGGTTAGCTTCTGCAGGGAGTGTGCATCGAAAATCAGGTAT
TAG

Upstream 100 bases:

>100_bases
TAGGAACAATTTACGGCGGGTGGTACATCATCTCCACCTTCGGTGTGGACGTTGCAAAGGTTGTGGGGGAGAGGGTTGTT
GAGGTAATAGGAGGGCTCCT

Downstream 100 bases:

>100_bases
CTACCCACAACCTCAAAAATCTTAACATCGCCGAATTCCTTTACCAGCCTGAAGTGGGTCAGGTTTTCGGCGTTCTCCAT
GTGGAGCCTGTAAAGCACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MKIYIQPLSVNSHTVEVLANSLPKIFNAEVFVLPASDVSLKCYNASRRQYNSTCILRMLPPIKVTLGVTGKDIYAKGMNF
VFGEAELGGARAVLSVFRLTTADSELYRERVVKEAVHEIGHVLGLKHCSNNCVMRFSNSVQDVDRKPVSFCRECASKIRY

Sequences:

>Translated_160_residues
MKIYIQPLSVNSHTVEVLANSLPKIFNAEVFVLPASDVSLKCYNASRRQYNSTCILRMLPPIKVTLGVTGKDIYAKGMNF
VFGEAELGGARAVLSVFRLTTADSELYRERVVKEAVHEIGHVLGLKHCSNNCVMRFSNSVQDVDRKPVSFCRECASKIRY
>Mature_160_residues
MKIYIQPLSVNSHTVEVLANSLPKIFNAEVFVLPASDVSLKCYNASRRQYNSTCILRMLPPIKVTLGVTGKDIYAKGMNF
VFGEAELGGARAVLSVFRLTTADSELYRERVVKEAVHEIGHVLGLKHCSNNCVMRFSNSVQDVDRKPVSFCRECASKIRY

Specific function: Probable zinc metalloprotease

COG id: COG1913

COG function: function code R; Predicted Zn-dependent proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M54 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): AMZA_ARCFU (O29917)

Other databases:

- EMBL:   AE000782
- PIR:   B69291
- RefSeq:   NP_069166.1
- MEROPS:   M54.001
- GeneID:   1483544
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF0330
- NMPDR:   fig|224325.1.peg.325
- TIGR:   AF_0330
- HOGENOM:   HBG508786
- OMA:   VFGEAEL
- BioCyc:   AFUL224325:AF_0330-MONOMER
- HAMAP:   MF_01842
- InterPro:   IPR012962
- InterPro:   IPR012091
- PIRSF:   PIRSF005785

Pfam domain/function: PF07998 Peptidase_M54

EC number: NA

Molecular weight: Translated: 17888; Mature: 17888

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: ACT_SITE 118-118

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYIQPLSVNSHTVEVLANSLPKIFNAEVFVLPASDVSLKCYNASRRQYNSTCILRMLP
CEEEEEECCCCCHHHHHHHHHCHHHHCCEEEEEECCCCEEEEECCCCHHCCCEEEEEECC
PIKVTLGVTGKDIYAKGMNFVFGEAELGGARAVLSVFRLTTADSELYRERVVKEAVHEIG
CEEEEEECCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
HVLGLKHCSNNCVMRFSNSVQDVDRKPVSFCRECASKIRY
HHHHHHHCCCCCEEEECCCHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIYIQPLSVNSHTVEVLANSLPKIFNAEVFVLPASDVSLKCYNASRRQYNSTCILRMLP
CEEEEEECCCCCHHHHHHHHHCHHHHCCEEEEEECCCCEEEEECCCCHHCCCEEEEEECC
PIKVTLGVTGKDIYAKGMNFVFGEAELGGARAVLSVFRLTTADSELYRERVVKEAVHEIG
CEEEEEECCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
HVLGLKHCSNNCVMRFSNSVQDVDRKPVSFCRECASKIRY
HHHHHHHCCCCCEEEECCCHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475