| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800506
Identifier: 114800506
GI number: 114800506
Start: 1319382
End: 1321316
Strand: Direct
Name: 114800506
Synonym: HNE_1288
Alternate gene names: NA
Gene position: 1319382-1321316 (Clockwise)
Preceding gene: 114797946
Following gene: 114797564
Centisome position: 35.61
GC content: 63.26
Gene sequence:
>1935_bases ATGGCGACGATGGACGACAGCGAGAATTTTCCGGTTAATCCCCGAATTGCGGCCGGGGCTGCAACGATGGGTGACATGAT CAGCCAGCGGCTTTCGCGCAGAGGTTTTCTCGGCGGATTGGGCGCGGTTTCCGGATTGGCGCTGGTGGGCTGTGCCACAG GGCGGGAAGTACCTGTGCCAACGGGGGATTTGCAGGCGCAGCCGGTCTTTCGCTTTGACGAGATCGCGCGCGGTATGGAT GAAACCCATCATGTGGCCGCCGGATATGACGCCGATGTGCTGATCCGCTGGGGCGATCCGCTGTTTTCCGACAGCCCGGC TTTCGACCCGCTGAACCAGACGGCGGCGGCGCAGCGGCGCCAGTTTGGCTATAACAACGATTTCATCGGCTATGTGCCGC TTAAGGCCGATGACGCGGGCCGGGAGCGGGCGATCCTGTGCATCAATCACGAATATACGAGCACCAACATCATGCTGCCG GGCGTTGTGGCGGGGTATCCCGCCTCGATGACGCGGGCGCTTTGTGAGGTGGAGATGGCCGCCCATGGCGGAACGATCCT GGAAATCCGCAAGGAGAATGGCGCGTGGAAGCCGGTGGTCGGCTCGCCCTATAACCGGCGGATTACGGCGGATACGACGC CGATGCAGCTGACCGGCCCGGCGGCGGGCAGCGCGCGCCTTCAGACGGCGGAAGACCCCACCGGCACGATGGTATCCGGT ACCATGAACAATTGCGCCGGCGGTATTACGCCCTGGGGCACTTATCTGATGGCGGAGGAAAACTTCAACGGCAACTTCAT GGGCGAGCTGCCTGAAGGCCACCGCGAGGCGGAGAACCATAAGCGCTATGGCGTGCCGTCTGGCTGGTATCAGTGGGGGC GGTTCTTTGACCGGTATGATGTGAGCAAGGAGCCCAACGAACCCAACCGGTTTGGCTGGATCGTTGAGGTGGACCCGATG GACCCGAACTCCGTGCCGAAGAAACGCACGGCGCTGGGCCGGGTGAAGCATGAGGGCGCCGAAAGCGTGGTGGCGCCCGA TGGCCGGGTGGTGGTGTATACCGGCGACGATCAGCGGTTTGATTACGTCTACAAGTTTGTGACCAAAGGGAAATTCGTGG CCGGCAACAAGGCAGCGAACGCCGACCTTCTGGATGAGGGCACGCTGTATGTGGCGCGTTTCGATGCTGATGGCACGCTG GCCTGGTTGCCGCTGGTGTATGGCACTGGTCCGCTGACGGAGGAAAACGGTTTTGCCTCGCAGGCTGATGTGCTGATCGG GACACGCCGGGCGGGCGACCTGCTGGGCGCAACGCCGATGGACCGGCCGGAAGATGTTGAACCCAACGCAAAGACCGGGC GCGTGTATGTGATGCTGACGAATAATGACCGGCGCACGGAAGATCAGGTCGACGCGGCCAATCCGCGGGCGTCCAACCGG TTTGGTCACATCATCGAGATCATTGAACCTGAAGGAGATTTTACCTCGGAAACCTCGCGCTGGGAAATCCTGGTGAAGTG CGGGGACCCGTCAATTGCGCAGGTTGGGGCAACGTGGAATCCTCTGACCACGGAGAATGGCTGGCTGGCGAGCCCGGACA ATTGCGCGATTGACCCGCAGGGGCGCCTCTGGATTTCGACCGATGGCAATGATGACACCGGCGCCGCCGATGGCCTGTGG GCGCTGGAGACCGATGGCGACCGGCGCGGAACCGGGCAGCATTTCTTCCGCTGTCCCGTTGGCGCGGAAATGTGCGGGCC GCGTTTCAACGAGAGCGGCGACGCGCTGTTCCTGGCGGTTCAGCACCCCGGCGATACGGACGGGGCGAGCTTTGAAGCGC CCAGCACCCGCTGGCCGGACTTTGCCGAGGCCATGCCGCCACGCCCGAGCGTGATGGTAGTGACCAGGCAGGGCGGCGGC CCCATCGGGGGATAG
Upstream 100 bases:
>100_bases CGGCGTGTAACATTTCTGTAAAAGTTAACGGCTGCTGCCATCTGTCTGTTACAAAACCACCGTATGCCGCACTTTCATGC ATAAAAGGAGGCGTTTGGCC
Downstream 100 bases:
>100_bases GGCCGCGCTTATCCCCGCTTTTCAGCGGCGCAGCAGAATGCGGTGGCCGCCCTCGCGCGTGAGTTCGAGGGCGCCATCGG CTGTGATGCGCCAGGCCATT
Product: Tat pathway signal sequence domain-containing protein
Products: NA
Alternate protein names: Phosphatase; Tat Pathway Signal Sequence Domain-Containing Protein; Tat Pathway Signal Sequence Domain Protein; Twin-Arginine Translocation Pathway Signal Protein; UxpB Protein; DTDP-Glucose 4 6-Dehydratase; Twin Arginine Translocation Pathway Signal Protein; Phosphatase-Like Protein; DTDP-D-Glucose 4 6-Dehydratase; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Alkaline Phosphatase Family Protein; Exported Protein
Number of amino acids: Translated: 644; Mature: 643
Protein sequence:
>644_residues MATMDDSENFPVNPRIAAGAATMGDMISQRLSRRGFLGGLGAVSGLALVGCATGREVPVPTGDLQAQPVFRFDEIARGMD ETHHVAAGYDADVLIRWGDPLFSDSPAFDPLNQTAAAQRRQFGYNNDFIGYVPLKADDAGRERAILCINHEYTSTNIMLP GVVAGYPASMTRALCEVEMAAHGGTILEIRKENGAWKPVVGSPYNRRITADTTPMQLTGPAAGSARLQTAEDPTGTMVSG TMNNCAGGITPWGTYLMAEENFNGNFMGELPEGHREAENHKRYGVPSGWYQWGRFFDRYDVSKEPNEPNRFGWIVEVDPM DPNSVPKKRTALGRVKHEGAESVVAPDGRVVVYTGDDQRFDYVYKFVTKGKFVAGNKAANADLLDEGTLYVARFDADGTL AWLPLVYGTGPLTEENGFASQADVLIGTRRAGDLLGATPMDRPEDVEPNAKTGRVYVMLTNNDRRTEDQVDAANPRASNR FGHIIEIIEPEGDFTSETSRWEILVKCGDPSIAQVGATWNPLTTENGWLASPDNCAIDPQGRLWISTDGNDDTGAADGLW ALETDGDRRGTGQHFFRCPVGAEMCGPRFNESGDALFLAVQHPGDTDGASFEAPSTRWPDFAEAMPPRPSVMVVTRQGGG PIGG
Sequences:
>Translated_644_residues MATMDDSENFPVNPRIAAGAATMGDMISQRLSRRGFLGGLGAVSGLALVGCATGREVPVPTGDLQAQPVFRFDEIARGMD ETHHVAAGYDADVLIRWGDPLFSDSPAFDPLNQTAAAQRRQFGYNNDFIGYVPLKADDAGRERAILCINHEYTSTNIMLP GVVAGYPASMTRALCEVEMAAHGGTILEIRKENGAWKPVVGSPYNRRITADTTPMQLTGPAAGSARLQTAEDPTGTMVSG TMNNCAGGITPWGTYLMAEENFNGNFMGELPEGHREAENHKRYGVPSGWYQWGRFFDRYDVSKEPNEPNRFGWIVEVDPM DPNSVPKKRTALGRVKHEGAESVVAPDGRVVVYTGDDQRFDYVYKFVTKGKFVAGNKAANADLLDEGTLYVARFDADGTL AWLPLVYGTGPLTEENGFASQADVLIGTRRAGDLLGATPMDRPEDVEPNAKTGRVYVMLTNNDRRTEDQVDAANPRASNR FGHIIEIIEPEGDFTSETSRWEILVKCGDPSIAQVGATWNPLTTENGWLASPDNCAIDPQGRLWISTDGNDDTGAADGLW ALETDGDRRGTGQHFFRCPVGAEMCGPRFNESGDALFLAVQHPGDTDGASFEAPSTRWPDFAEAMPPRPSVMVVTRQGGG PIGG >Mature_643_residues ATMDDSENFPVNPRIAAGAATMGDMISQRLSRRGFLGGLGAVSGLALVGCATGREVPVPTGDLQAQPVFRFDEIARGMDE THHVAAGYDADVLIRWGDPLFSDSPAFDPLNQTAAAQRRQFGYNNDFIGYVPLKADDAGRERAILCINHEYTSTNIMLPG VVAGYPASMTRALCEVEMAAHGGTILEIRKENGAWKPVVGSPYNRRITADTTPMQLTGPAAGSARLQTAEDPTGTMVSGT MNNCAGGITPWGTYLMAEENFNGNFMGELPEGHREAENHKRYGVPSGWYQWGRFFDRYDVSKEPNEPNRFGWIVEVDPMD PNSVPKKRTALGRVKHEGAESVVAPDGRVVVYTGDDQRFDYVYKFVTKGKFVAGNKAANADLLDEGTLYVARFDADGTLA WLPLVYGTGPLTEENGFASQADVLIGTRRAGDLLGATPMDRPEDVEPNAKTGRVYVMLTNNDRRTEDQVDAANPRASNRF GHIIEIIEPEGDFTSETSRWEILVKCGDPSIAQVGATWNPLTTENGWLASPDNCAIDPQGRLWISTDGNDDTGAADGLWA LETDGDRRGTGQHFFRCPVGAEMCGPRFNESGDALFLAVQHPGDTDGASFEAPSTRWPDFAEAMPPRPSVMVVTRQGGGP IGG
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69727; Mature: 69596
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATMDDSENFPVNPRIAAGAATMGDMISQRLSRRGFLGGLGAVSGLALVGCATGREVPVP CCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEECCCCCCCCC TGDLQAQPVFRFDEIARGMDETHHVAAGYDADVLIRWGDPLFSDSPAFDPLNQTAAAQRR CCCCCCCCCCCHHHHHCCCCHHHEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH QFGYNNDFIGYVPLKADDAGRERAILCINHEYTSTNIMLPGVVAGYPASMTRALCEVEMA HCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCEEECCCHHCCCCHHHHHHHHHHHHH AHGGTILEIRKENGAWKPVVGSPYNRRITADTTPMQLTGPAAGSARLQTAEDPTGTMVSG CCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCEEEECCCCCCCEEEC TMNNCAGGITPWGTYLMAEENFNGNFMGELPEGHREAENHKRYGVPSGWYQWGRFFDRYD CHHHCCCCCCCCCEEEEEECCCCCCEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCC VSKEPNEPNRFGWIVEVDPMDPNSVPKKRTALGRVKHEGAESVVAPDGRVVVYTGDDQRF CCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEECCCCEEEEEECCCCCH DYVYKFVTKGKFVAGNKAANADLLDEGTLYVARFDADGTLAWLPLVYGTGPLTEENGFAS HHHHHHHHCCEEEECCCCCCCCEECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCC QADVLIGTRRAGDLLGATPMDRPEDVEPNAKTGRVYVMLTNNDRRTEDQVDAANPRASNR CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCCCCCCCCC FGHIIEIIEPEGDFTSETSRWEILVKCGDPSIAQVGATWNPLTTENGWLASPDNCAIDPQ CCEEEEEECCCCCCCCCCCEEEEEEEECCCCCEECCCCCCCCCCCCCEEECCCCCEECCC GRLWISTDGNDDTGAADGLWALETDGDRRGTGQHFFRCPVGAEMCGPRFNESGDALFLAV CCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCHHHCCCCCCCCCCEEEEEE QHPGDTDGASFEAPSTRWPDFAEAMPPRPSVMVVTRQGGGPIGG ECCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure ATMDDSENFPVNPRIAAGAATMGDMISQRLSRRGFLGGLGAVSGLALVGCATGREVPVP CCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEECCCCCCCCC TGDLQAQPVFRFDEIARGMDETHHVAAGYDADVLIRWGDPLFSDSPAFDPLNQTAAAQRR CCCCCCCCCCCHHHHHCCCCHHHEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH QFGYNNDFIGYVPLKADDAGRERAILCINHEYTSTNIMLPGVVAGYPASMTRALCEVEMA HCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCEEECCCHHCCCCHHHHHHHHHHHHH AHGGTILEIRKENGAWKPVVGSPYNRRITADTTPMQLTGPAAGSARLQTAEDPTGTMVSG CCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCEEEECCCCCCCEEEC TMNNCAGGITPWGTYLMAEENFNGNFMGELPEGHREAENHKRYGVPSGWYQWGRFFDRYD CHHHCCCCCCCCCEEEEEECCCCCCEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCC VSKEPNEPNRFGWIVEVDPMDPNSVPKKRTALGRVKHEGAESVVAPDGRVVVYTGDDQRF CCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEECCCCEEEEEECCCCCH DYVYKFVTKGKFVAGNKAANADLLDEGTLYVARFDADGTLAWLPLVYGTGPLTEENGFAS HHHHHHHHCCEEEECCCCCCCCEECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCC QADVLIGTRRAGDLLGATPMDRPEDVEPNAKTGRVYVMLTNNDRRTEDQVDAANPRASNR CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCCCCCCCCC FGHIIEIIEPEGDFTSETSRWEILVKCGDPSIAQVGATWNPLTTENGWLASPDNCAIDPQ CCEEEEEECCCCCCCCCCCEEEEEEEECCCCCEECCCCCCCCCCCCCEEECCCCCEECCC GRLWISTDGNDDTGAADGLWALETDGDRRGTGQHFFRCPVGAEMCGPRFNESGDALFLAV CCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCHHHCCCCCCCCCCEEEEEE QHPGDTDGASFEAPSTRWPDFAEAMPPRPSVMVVTRQGGGPIGG ECCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA