Click here to switch to the map view.

The map label for this gene is 114800298

Identifier: 114800298

GI number: 114800298

Start: 3539176

End: 3539769

Strand: Direct

Name: 114800298

Synonym: HNE_3394

Alternate gene names: NA

Gene position: 3539176-3539769 (Clockwise)

Preceding gene: 114799381

Following gene: 114799537

Centisome position: 95.52

GC content: 62.12

Gene sequence:

>594_bases
ATGCCCGCAGGGGCCACACCGGAGGGACTTATGGCTGAGATTATCACCACCCCGCCCAATGGCCGTCCCGCCCTCGTCCT
GAACGCCGATTTCAGGCCGCTTTCCTATTATCCGCTGTCCCTGTGGCCGTGGCAGGAAGTGATCAAGGCGGTGTTCCTGG
ACCGCGTCGATATTATTGCCGAATACGATTACGTGGTGCGCAGCCCCAGCCGGGAGATGCGCCTGCCCTCCGTGATCGCC
CTGCGTGACTTTGTGCGCCAGGACCGGGCGCCTGCCTTCACCCGCTTCAACGTGTTCCTGCGCGACGGGTTCAAATGCGC
CTATTGCGGCGCGCATGACAATCTGACCTTCGATCACGTCATCCCCCGCTCCAAAGGCGGACGCACGACCTGGGAAAACA
TCGTGACCGCCTGCAGCCCCTGCAATCTGGCCAAGGGCGGCAAGCTGCTGCGCGCCAGTGGCCTGGACCTGCAACACCGG
CCGTTCCGCCCGAATAACTTCCAGCTTCAGGACATCGGGCGCAAATTCCCGCCCAACTACCTGCACGATACCTGGATGGA
CTATCTCTACTGGGACGTGGAACTGGAAGGCTGA

Upstream 100 bases:

>100_bases
CGTTCGGCCCGCACTGTCATAATCTTATGATCGGAATCGCCTAAAGCACGGCGACAAGGACGATGAGGAGTTTCCGTCTT
CAGCAGGATCAATGACGATC

Downstream 100 bases:

>100_bases
TCCCCGCCGGGACACCCGCCCCAGTCGAACCGCCAGGCGCGGAAATGCACCGGATCGCCGTTTGAATAATTGAGCGCGTA
ATAGGGCGCCCCTTCCGTCA

Product: HNH endonuclease domain-containing protein

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; Restriction Endonuclease; HNH Endonuclease Domain Protein; HNH Endonuclease Domain-Containing Protein; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Nuclease; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MPAGATPEGLMAEIITTPPNGRPALVLNADFRPLSYYPLSLWPWQEVIKAVFLDRVDIIAEYDYVVRSPSREMRLPSVIA
LRDFVRQDRAPAFTRFNVFLRDGFKCAYCGAHDNLTFDHVIPRSKGGRTTWENIVTACSPCNLAKGGKLLRASGLDLQHR
PFRPNNFQLQDIGRKFPPNYLHDTWMDYLYWDVELEG

Sequences:

>Translated_197_residues
MPAGATPEGLMAEIITTPPNGRPALVLNADFRPLSYYPLSLWPWQEVIKAVFLDRVDIIAEYDYVVRSPSREMRLPSVIA
LRDFVRQDRAPAFTRFNVFLRDGFKCAYCGAHDNLTFDHVIPRSKGGRTTWENIVTACSPCNLAKGGKLLRASGLDLQHR
PFRPNNFQLQDIGRKFPPNYLHDTWMDYLYWDVELEG
>Mature_196_residues
PAGATPEGLMAEIITTPPNGRPALVLNADFRPLSYYPLSLWPWQEVIKAVFLDRVDIIAEYDYVVRSPSREMRLPSVIAL
RDFVRQDRAPAFTRFNVFLRDGFKCAYCGAHDNLTFDHVIPRSKGGRTTWENIVTACSPCNLAKGGKLLRASGLDLQHRP
FRPNNFQLQDIGRKFPPNYLHDTWMDYLYWDVELEG

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22575; Mature: 22444

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAGATPEGLMAEIITTPPNGRPALVLNADFRPLSYYPLSLWPWQEVIKAVFLDRVDIIA
CCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHH
EYDYVVRSPSREMRLPSVIALRDFVRQDRAPAFTRFNVFLRDGFKCAYCGAHDNLTFDHV
HCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEECCCCCCCHHHC
IPRSKGGRTTWENIVTACSPCNLAKGGKLLRASGLDLQHRPFRPNNFQLQDIGRKFPPNY
CCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEHHHHHCCCCCCH
LHDTWMDYLYWDVELEG
HHHHHHHHEEEEEEECC
>Mature Secondary Structure 
PAGATPEGLMAEIITTPPNGRPALVLNADFRPLSYYPLSLWPWQEVIKAVFLDRVDIIA
CCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHH
EYDYVVRSPSREMRLPSVIALRDFVRQDRAPAFTRFNVFLRDGFKCAYCGAHDNLTFDHV
HCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEECCCCCCCHHHC
IPRSKGGRTTWENIVTACSPCNLAKGGKLLRASGLDLQHRPFRPNNFQLQDIGRKFPPNY
CCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEHHHHHCCCCCCH
LHDTWMDYLYWDVELEG
HHHHHHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA