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The map label for this gene is arnC [H]

Identifier: 114799537

GI number: 114799537

Start: 3541774

End: 3542544

Strand: Direct

Name: arnC [H]

Synonym: HNE_3396

Alternate gene names: 114799537

Gene position: 3541774-3542544 (Clockwise)

Preceding gene: 114800298

Following gene: 114799590

Centisome position: 95.59

GC content: 64.33

Gene sequence:

>771_bases
ATGTGCGCCCGTCATCCGAATTGCATGAATGGACTGGCCGTGGCCGAATCTCTTGAATTCTCCGTTGTCGTGCCCGTTCA
CAATGAAGCCGGGAATGTCGAAAGTCTCGCCACCGAGATTGCGCGCGCGCTCGATGGCCGCGCGTTTGAAATGATCTTTG
TCGACGATGCGTCCACCGATGACACCCGCGCCCAGCTGGCCGCGCTCAAATCCCGTTTTCCGATGCTGCGGGTGCTCGGC
CACCGGAAGAATGCCGGGCAGAGCCGGGCCATCCGCTCGGGCATCCTGGCGGCGCGCGGCATCATTGTCGGCACACTGGA
CGGGGACGGGCAGAACGACCCGGCCGACCTGCCAGCTCTTTACCGCCAGCTGACCCGCGCCGACGCGCCCCATGGCCTGA
AAATGGTGATGGGCCGCCGCGGCAGCCGCAAGGACACCGCCTGGAAACGCTTCGGCAGCCGCTTTGCCAACAATATCCGC
CAACGGATGCTGAAGGACGACTGCGACGACAGCGGCTGCGGCATCAAGGTGATGGACCGGGCAACCTTCCTGCTCCTCCC
CTATTTCGACCATATGCACCGCTACATGCCCGCGCTGATGCGTTCGGAGGGCCACAGCGTCGAGTTCCGGGAAGTGAACC
ATCGCGAGCGCGGCACGGGCAAATCGAACTACACCAATTTCGGCCGCCTCAAGGACGCCCTGTCAGACCTGCGCGGCGTG
ATGTGGCTGATCCGCCGCCGCCGCAATCCGGGCGGGGCGGACGAGATTTAG

Upstream 100 bases:

>100_bases
GCTCAGCAAAGCGGACAATTCGGCCACAGTTGCCAAGAAATGCTGTTCCCCGGCGCCAGAGCATGACAGCGTGGTCTCGA
TTTTGAGCTCCGTCAGGGTT

Downstream 100 bases:

>100_bases
CCAGCCCTAGAACAGCTCCGCGAGGCAAGCCGAGATCGTCTCGGGCGTGTCCTCATGGGTGAAGAACGTCTTCAGCTGCC
AGTCCTCATCCATCACATAG

Product: glycosyl transferase group 2 family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MCARHPNCMNGLAVAESLEFSVVVPVHNEAGNVESLATEIARALDGRAFEMIFVDDASTDDTRAQLAALKSRFPMLRVLG
HRKNAGQSRAIRSGILAARGIIVGTLDGDGQNDPADLPALYRQLTRADAPHGLKMVMGRRGSRKDTAWKRFGSRFANNIR
QRMLKDDCDDSGCGIKVMDRATFLLLPYFDHMHRYMPALMRSEGHSVEFREVNHRERGTGKSNYTNFGRLKDALSDLRGV
MWLIRRRRNPGGADEI

Sequences:

>Translated_256_residues
MCARHPNCMNGLAVAESLEFSVVVPVHNEAGNVESLATEIARALDGRAFEMIFVDDASTDDTRAQLAALKSRFPMLRVLG
HRKNAGQSRAIRSGILAARGIIVGTLDGDGQNDPADLPALYRQLTRADAPHGLKMVMGRRGSRKDTAWKRFGSRFANNIR
QRMLKDDCDDSGCGIKVMDRATFLLLPYFDHMHRYMPALMRSEGHSVEFREVNHRERGTGKSNYTNFGRLKDALSDLRGV
MWLIRRRRNPGGADEI
>Mature_256_residues
MCARHPNCMNGLAVAESLEFSVVVPVHNEAGNVESLATEIARALDGRAFEMIFVDDASTDDTRAQLAALKSRFPMLRVLG
HRKNAGQSRAIRSGILAARGIIVGTLDGDGQNDPADLPALYRQLTRADAPHGLKMVMGRRGSRKDTAWKRFGSRFANNIR
QRMLKDDCDDSGCGIKVMDRATFLLLPYFDHMHRYMPALMRSEGHSVEFREVNHRERGTGKSNYTNFGRLKDALSDLRGV
MWLIRRRRNPGGADEI

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788588, Length=221, Percent_Identity=28.9592760180996, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 28612; Mature: 28612

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCARHPNCMNGLAVAESLEFSVVVPVHNEAGNVESLATEIARALDGRAFEMIFVDDASTD
CCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCC
DTRAQLAALKSRFPMLRVLGHRKNAGQSRAIRSGILAARGIIVGTLDGDGQNDPADLPAL
HHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHH
YRQLTRADAPHGLKMVMGRRGSRKDTAWKRFGSRFANNIRQRMLKDDCDDSGCGIKVMDR
HHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
ATFLLLPYFDHMHRYMPALMRSEGHSVEFREVNHRERGTGKSNYTNFGRLKDALSDLRGV
HHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHH
MWLIRRRRNPGGADEI
HHHHHHHCCCCCCCCC
>Mature Secondary Structure
MCARHPNCMNGLAVAESLEFSVVVPVHNEAGNVESLATEIARALDGRAFEMIFVDDASTD
CCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCC
DTRAQLAALKSRFPMLRVLGHRKNAGQSRAIRSGILAARGIIVGTLDGDGQNDPADLPAL
HHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHH
YRQLTRADAPHGLKMVMGRRGSRKDTAWKRFGSRFANNIRQRMLKDDCDDSGCGIKVMDR
HHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
ATFLLLPYFDHMHRYMPALMRSEGHSVEFREVNHRERGTGKSNYTNFGRLKDALSDLRGV
HHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHH
MWLIRRRRNPGGADEI
HHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA