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The map label for this gene is sqr

Identifier: 114800223

GI number: 114800223

Start: 2535457

End: 2536728

Strand: Reverse

Name: sqr

Synonym: HNE_2427

Alternate gene names: NA

Gene position: 2536728-2535457 (Counterclockwise)

Preceding gene: 114797070

Following gene: 114798133

Centisome position: 68.47

GC content: 58.33

Gene sequence:

>1272_bases
ATGGCGAAAATTATCGTTTTGGGGGCCGGCCTTGGTGGCGTCATCGCCGCTTACGAGATCCGCAATGCGGTCCGCCGGGA
AGACACTGTGTCGGTGATCAATGCGACGGACTATTACCAGTTCGTGCCCTCTAATCCTTGGGTCCTCGTAGGCTGGAGAG
ACCGAAAGGACATTGTGGTCGATCTCGCTGGTCCCATGAAGAAGCGTCATATCGGCCTGATTGTGGGGCAGGCGGAGCGG
GTAGAGCCGGAGGCCAAACGTGTGCGCATGAGTGATGGCCAGCTTCTCGACTATGATTATCTTGTTATCGCAACCGGCCC
GGAGCTGGCCTTTGATGAGATCGAAGGTTTGGGTCCGGACGGTTACACTCAGTCCGTCTGCCAGATTGATCATGCGCTTT
CCGCTCACCAGGCGTTTGAAGCGTTCTGCCGCGACCCTGGCCCGGTGGTGGTGGGCGCCGTTCAGGGCGCGTCATGCTTC
GGCCCGGCCTACGAAACCCTCATGATCATCGAAACCGAGCTCCGCAAACGGAAGATCCGGGACCGGGTTCCGATGACCTT
CGTGACTTCAGAGCCCTATATCGGCCACCTCGGCCTTGATGGGGTGGGCGATACAAAAAGCCTGCTCGAAAGCGAAATGC
GCGAGCGCCACATCAAATGGATCACCAATGCCCGCGTCCTGAAGGCCGAGCCGGACAAGATGACGGTTGAAGAGGTCAAT
GAAGACGGCAGCATTAAGCAGGTTCACGAACTCCCGATGAAGTTCTCCATGATGCTGCCCGCATTCCGGGGCGTGAAAGC
CGTACACGGCATCGAGGGGCTTACCAATCCGCGCGGCTTCATCCTCACGGACAAGCATCAGCGCAATCCGAAATATCCTG
AAATCTTCGGCATAGGCGTGTGCATTGCCATTCCGCCGGTCGGTAAGACGCCCGTACCGGTCGGTGTTCCCAAAACCGGA
TTCATGATCGAGTCCATGGTCACGGCGACGGCTGAAAACCTTGCACAACTCCTCGACGGCCAGGAGCCGACACATGAGGC
GACTTGGAACGCCATCTGCCTGGCAGACTTTGGCGACAAGGGTGTGGCGTTCATTGCCCAGCCCCAGATCCCGCCGCGCA
ATGTGAATTGGTCGGGCTCCGGCGGCTGGGTGCATACCGCCAAGGTTGGTTTCGAGAAATACTTCCTCGGCAAGGTGAGG
GCGGGCAAGGCGGAAACATTCTATGAGAATGCCGCCCTCGCCCTTATCAAGACCTACAAGCTGAAAGGCTGA

Upstream 100 bases:

>100_bases
ACAACTGCAATTTCCCCCTTCGAGCCATTAGTAATAATACGTATTTTATAAAACAATAAAATATAATTATCTTCGATATC
AAGATGGGAGCGCACAGGAT

Downstream 100 bases:

>100_bases
AAGACGCGACAGGAGACGCTGACATGGCAAGTGAAGACAGGATGATCGTTTGCCTCGCCTGCAATGCGGTGAACCGCGTG
CCGGAGGGCAGGGCACTGAC

Product: sulfide-quinone oxidoreductase

Products: NA

Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; SulfideQuinone Oxidoreductase; Sulfide Quinone Reductase; Pyridine Nucleotide-Disulphide Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; Quinone Reductase; FAD Dependent Oxidoreductase; Sulfide-Quinone Oxidoreductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MAKIIVLGAGLGGVIAAYEIRNAVRREDTVSVINATDYYQFVPSNPWVLVGWRDRKDIVVDLAGPMKKRHIGLIVGQAER
VEPEAKRVRMSDGQLLDYDYLVIATGPELAFDEIEGLGPDGYTQSVCQIDHALSAHQAFEAFCRDPGPVVVGAVQGASCF
GPAYETLMIIETELRKRKIRDRVPMTFVTSEPYIGHLGLDGVGDTKSLLESEMRERHIKWITNARVLKAEPDKMTVEEVN
EDGSIKQVHELPMKFSMMLPAFRGVKAVHGIEGLTNPRGFILTDKHQRNPKYPEIFGIGVCIAIPPVGKTPVPVGVPKTG
FMIESMVTATAENLAQLLDGQEPTHEATWNAICLADFGDKGVAFIAQPQIPPRNVNWSGSGGWVHTAKVGFEKYFLGKVR
AGKAETFYENAALALIKTYKLKG

Sequences:

>Translated_423_residues
MAKIIVLGAGLGGVIAAYEIRNAVRREDTVSVINATDYYQFVPSNPWVLVGWRDRKDIVVDLAGPMKKRHIGLIVGQAER
VEPEAKRVRMSDGQLLDYDYLVIATGPELAFDEIEGLGPDGYTQSVCQIDHALSAHQAFEAFCRDPGPVVVGAVQGASCF
GPAYETLMIIETELRKRKIRDRVPMTFVTSEPYIGHLGLDGVGDTKSLLESEMRERHIKWITNARVLKAEPDKMTVEEVN
EDGSIKQVHELPMKFSMMLPAFRGVKAVHGIEGLTNPRGFILTDKHQRNPKYPEIFGIGVCIAIPPVGKTPVPVGVPKTG
FMIESMVTATAENLAQLLDGQEPTHEATWNAICLADFGDKGVAFIAQPQIPPRNVNWSGSGGWVHTAKVGFEKYFLGKVR
AGKAETFYENAALALIKTYKLKG
>Mature_422_residues
AKIIVLGAGLGGVIAAYEIRNAVRREDTVSVINATDYYQFVPSNPWVLVGWRDRKDIVVDLAGPMKKRHIGLIVGQAERV
EPEAKRVRMSDGQLLDYDYLVIATGPELAFDEIEGLGPDGYTQSVCQIDHALSAHQAFEAFCRDPGPVVVGAVQGASCFG
PAYETLMIIETELRKRKIRDRVPMTFVTSEPYIGHLGLDGVGDTKSLLESEMRERHIKWITNARVLKAEPDKMTVEEVNE
DGSIKQVHELPMKFSMMLPAFRGVKAVHGIEGLTNPRGFILTDKHQRNPKYPEIFGIGVCIAIPPVGKTPVPVGVPKTGF
MIESMVTATAENLAQLLDGQEPTHEATWNAICLADFGDKGVAFIAQPQIPPRNVNWSGSGGWVHTAKVGFEKYFLGKVRA
GKAETFYENAALALIKTYKLKG

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46484; Mature: 46353

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIIVLGAGLGGVIAAYEIRNAVRREDTVSVINATDYYQFVPSNPWVLVGWRDRKDIVV
CEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCEEEEEECCCCCEEE
DLAGPMKKRHIGLIVGQAERVEPEAKRVRMSDGQLLDYDYLVIATGPELAFDEIEGLGPD
ECCCCCCCCEEEEEEECHHHCCCHHHHEECCCCCEEEEEEEEEECCCCCCHHHHCCCCCC
GYTQSVCQIDHALSAHQAFEAFCRDPGPVVVGAVQGASCFGPAYETLMIIETELRKRKIR
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHEEEEEEHHHHHHHHH
DRVPMTFVTSEPYIGHLGLDGVGDTKSLLESEMRERHIKWITNARVLKAEPDKMTVEEVN
HCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHCC
EDGSIKQVHELPMKFSMMLPAFRGVKAVHGIEGLTNPRGFILTDKHQRNPKYPEIFGIGV
CCCCHHHHHHCCHHHHHHHHHHHCHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEEEEE
CIAIPPVGKTPVPVGVPKTGFMIESMVTATAENLAQLLDGQEPTHEATWNAICLADFGDK
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC
GVAFIAQPQIPPRNVNWSGSGGWVHTAKVGFEKYFLGKVRAGKAETFYENAALALIKTYK
CEEEEECCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHCHHEEEEEEEE
LKG
CCC
>Mature Secondary Structure 
AKIIVLGAGLGGVIAAYEIRNAVRREDTVSVINATDYYQFVPSNPWVLVGWRDRKDIVV
EEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCEEEEEECCCCCEEE
DLAGPMKKRHIGLIVGQAERVEPEAKRVRMSDGQLLDYDYLVIATGPELAFDEIEGLGPD
ECCCCCCCCEEEEEEECHHHCCCHHHHEECCCCCEEEEEEEEEECCCCCCHHHHCCCCCC
GYTQSVCQIDHALSAHQAFEAFCRDPGPVVVGAVQGASCFGPAYETLMIIETELRKRKIR
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHEEEEEEHHHHHHHHH
DRVPMTFVTSEPYIGHLGLDGVGDTKSLLESEMRERHIKWITNARVLKAEPDKMTVEEVN
HCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHCC
EDGSIKQVHELPMKFSMMLPAFRGVKAVHGIEGLTNPRGFILTDKHQRNPKYPEIFGIGV
CCCCHHHHHHCCHHHHHHHHHHHCHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEEEEE
CIAIPPVGKTPVPVGVPKTGFMIESMVTATAENLAQLLDGQEPTHEATWNAICLADFGDK
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC
GVAFIAQPQIPPRNVNWSGSGGWVHTAKVGFEKYFLGKVRAGKAETFYENAALALIKTYK
CEEEEECCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHCHHEEEEEEEE
LKG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA