| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114797070
Identifier: 114797070
GI number: 114797070
Start: 2547114
End: 2549393
Strand: Reverse
Name: 114797070
Synonym: HNE_2436
Alternate gene names: NA
Gene position: 2549393-2547114 (Counterclockwise)
Preceding gene: 114800554
Following gene: 114800223
Centisome position: 68.81
GC content: 60.13
Gene sequence:
>2280_bases ATGAAAACCACGACCATTTCAGCAGCAGATTTTATCGGCCGCATACTCTCAGGCGGCGGCTTCCATGTGGGCGAGCGCTA TGTCGTCACCGGCGAGGTCAGCCTGCGCGGCGCCATCCTGCCGCGGCCGCTGCTGTTGCACGGTTTCCTGTTTGAAGGCC CGGTCGATCTCTCGGACACAAGCGTTCCGGGAGAGCTGGACTTCTCCGATTGCCGGTTCCGCCGCAATCTGCGTCTCAAT CAGATGCATGTGCAGGGCTCAATCCGTTTCCGCCGTGTACGCATTGATCTGGAGGAATATCAGCGCGACAACTCAGGCGG CATCGGCATCGACGCTGTGGGCCTGGAGGCTGATGGCGATCTGCGTATCGAGGATCTGATATGCAGCGGCGGCGTCCAGG CGGCCGGCCTTGCTGTTGCGGGCGCGGCCGATTGGCAAGACATTGAAATCGCCCATTCGCTCGATCTGTCGGGTGGCCAG ATCGGTGGCCGGTTGCAGATGTCACGCTGCAAGGTGCGCGGCAGTATCAACATGATGGCGCTGAATGTCAGGTCTCATGC TGAGATTGGCCAGGTGAATGTTGCCGGCGATTGTTCCCTCACCTCGGCCCGAATTGAACAGGGCCTCTATATTGCCTCTA CCCGGATCGAGGGCACGCTTCTCATCAGCAATGCGTACATGTCCGCGCTGCAGATTGAACGGCAATCGCCAAACGTGCAG GGATCGCACTTTGGCGCCATATCAGCTTACGGGCTTGAAATATCGCTCGGGTTCAAGCTCTGCGGTGCCACGGTCGGGCC CCATCCCAGCGATCCTTCAGAACCGGTTCTGTCGCTCGGGCGGATCAAGGCGGACCATATCCAGTTCTGGCGTCCGTCCC TCTATTGGAATGTAATGCTGCAGGCTCAGAATGCGGATGCGGACACGCGGTTGAAGATCCGTGACCTGATGCTCACGCAC GTTGATGGCGACATCGAAATGGACGCGGCCCAAATCGTGCGCACCATCGACATGACAGGTCTTGTGGCAACAGGCAGGGT CAATCTGTCTAACAGCCAGATTGGCAATGAGCTCCTGGTGAGTTCTGCGCTCACTTTGAGGAACAACCACCAGACCCGCC GGGAACGCCGCGAAATTCTGAACGCGGCCTTGGGCGGCGATACGACCAGGGGTGAACCCCGTCGGGCATCATTCCGTTCC CTGAATATGGAAGATTGCCGGATCGAAACGGATGTCGATCTGACAGGTCTCGATCTCAGAGAGGGCCTCAGCGCCCAGCA TGTCACGGCTGGCGGCACGGTCATGCTTGCCGAAACGGGCGAAGATGTTCCAGAAAGTTTCATCAACTGTCCGGCCCGCG CCGATTTCACTGGGGCGAAACTCTACAAGCTCCAGGCGTCCGGGTCCTCGTTCAATGCGCTGCCCCCGGCGGAAGGTGGC ACGCTACCCGCCGGCCTCATTCTGGACGACGCGGAGGTCATGCTTCTGAGGCTATTCCCCAAGCGGGGGCTCGGCCGGGA GGAAACTTATCCCAAACCCCTCGGTGTCTCCAATCTGACCGTCCGGCACTGGAAACTGCTCGATAGCGAGAATGAAGATT TCCGCAGCGAGAGCGAGGAGGCCAAAACATTCCTCCGTCTCCTGAAGAATGATCCGCGCATCAGCCGCACAACCTATCTG TCCATTGTTTCCACTCTGCGCGATCAGGGGCACGAGCGCGCGTCTTCCAGCGTCTTTCGCGGGCTTTCCTGGCGCACGCT GGGCGAGGGTATCCGGCAGACACTGAACCAGCTTTCACCCAGGCGCGCGCTGTTTTTACCCTTACAGGCGGCCAGTTGGC TGCTGACATCCGCCTATGGCCTGCTGCTCGGCTTCGGCACAGCGCCCCTGCGCCTCGGCGCCCTCATTTTGGGAGTGGGG TTCCTGTCCTATATCAGCGTCTACAACCTCAATTCCAATCTGGAGATGCGGGTCAGCCAGGAAGGGGAGGCGCCCCGCTA TGCGGCGGCTATTGGAAATGATGCGTGCACGAACTGGCAGAAGACATTGGTGATGTTACGCCATCACGTGCCCGTGGCAG TCAATGAGGAATCCGAGACGTGCCGTCTGCGCCAGTATGGCTCCGTCAATGCCACGCCGCCCCTCTGGTTGGGCGCTGAC CCTCCGGTGGTGCCATGGCCGCTCAGTCCGCTGGAGTTTGGCGTATACATGCGCCTGCTGGCGTTGATGCTCTGGCCGCC TTTTCTGGCATTTGCCCTCAAGCGCGCCTTCCGCGAGTAG
Upstream 100 bases:
>100_bases GGATGTTCGATGATGAAGGTCTTTGGCCAGACAAGCTGCCGATCGTTCCTGCACGCCGCGACGCGCTGACATTTGCATTT TATCCGCTGCGGAGCGGCCA
Downstream 100 bases:
>100_bases CGCTTGGCTCAAGCCATGCGGCGCAGGTCTTCGTCCGGATCATGGGTGCTGCAATCCGATCCTGCTGCGGGTGTGAGGTA TTCGAGCAGTTGTGTCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 759; Mature: 759
Protein sequence:
>759_residues MKTTTISAADFIGRILSGGGFHVGERYVVTGEVSLRGAILPRPLLLHGFLFEGPVDLSDTSVPGELDFSDCRFRRNLRLN QMHVQGSIRFRRVRIDLEEYQRDNSGGIGIDAVGLEADGDLRIEDLICSGGVQAAGLAVAGAADWQDIEIAHSLDLSGGQ IGGRLQMSRCKVRGSINMMALNVRSHAEIGQVNVAGDCSLTSARIEQGLYIASTRIEGTLLISNAYMSALQIERQSPNVQ GSHFGAISAYGLEISLGFKLCGATVGPHPSDPSEPVLSLGRIKADHIQFWRPSLYWNVMLQAQNADADTRLKIRDLMLTH VDGDIEMDAAQIVRTIDMTGLVATGRVNLSNSQIGNELLVSSALTLRNNHQTRRERREILNAALGGDTTRGEPRRASFRS LNMEDCRIETDVDLTGLDLREGLSAQHVTAGGTVMLAETGEDVPESFINCPARADFTGAKLYKLQASGSSFNALPPAEGG TLPAGLILDDAEVMLLRLFPKRGLGREETYPKPLGVSNLTVRHWKLLDSENEDFRSESEEAKTFLRLLKNDPRISRTTYL SIVSTLRDQGHERASSSVFRGLSWRTLGEGIRQTLNQLSPRRALFLPLQAASWLLTSAYGLLLGFGTAPLRLGALILGVG FLSYISVYNLNSNLEMRVSQEGEAPRYAAAIGNDACTNWQKTLVMLRHHVPVAVNEESETCRLRQYGSVNATPPLWLGAD PPVVPWPLSPLEFGVYMRLLALMLWPPFLAFALKRAFRE
Sequences:
>Translated_759_residues MKTTTISAADFIGRILSGGGFHVGERYVVTGEVSLRGAILPRPLLLHGFLFEGPVDLSDTSVPGELDFSDCRFRRNLRLN QMHVQGSIRFRRVRIDLEEYQRDNSGGIGIDAVGLEADGDLRIEDLICSGGVQAAGLAVAGAADWQDIEIAHSLDLSGGQ IGGRLQMSRCKVRGSINMMALNVRSHAEIGQVNVAGDCSLTSARIEQGLYIASTRIEGTLLISNAYMSALQIERQSPNVQ GSHFGAISAYGLEISLGFKLCGATVGPHPSDPSEPVLSLGRIKADHIQFWRPSLYWNVMLQAQNADADTRLKIRDLMLTH VDGDIEMDAAQIVRTIDMTGLVATGRVNLSNSQIGNELLVSSALTLRNNHQTRRERREILNAALGGDTTRGEPRRASFRS LNMEDCRIETDVDLTGLDLREGLSAQHVTAGGTVMLAETGEDVPESFINCPARADFTGAKLYKLQASGSSFNALPPAEGG TLPAGLILDDAEVMLLRLFPKRGLGREETYPKPLGVSNLTVRHWKLLDSENEDFRSESEEAKTFLRLLKNDPRISRTTYL SIVSTLRDQGHERASSSVFRGLSWRTLGEGIRQTLNQLSPRRALFLPLQAASWLLTSAYGLLLGFGTAPLRLGALILGVG FLSYISVYNLNSNLEMRVSQEGEAPRYAAAIGNDACTNWQKTLVMLRHHVPVAVNEESETCRLRQYGSVNATPPLWLGAD PPVVPWPLSPLEFGVYMRLLALMLWPPFLAFALKRAFRE >Mature_759_residues MKTTTISAADFIGRILSGGGFHVGERYVVTGEVSLRGAILPRPLLLHGFLFEGPVDLSDTSVPGELDFSDCRFRRNLRLN QMHVQGSIRFRRVRIDLEEYQRDNSGGIGIDAVGLEADGDLRIEDLICSGGVQAAGLAVAGAADWQDIEIAHSLDLSGGQ IGGRLQMSRCKVRGSINMMALNVRSHAEIGQVNVAGDCSLTSARIEQGLYIASTRIEGTLLISNAYMSALQIERQSPNVQ GSHFGAISAYGLEISLGFKLCGATVGPHPSDPSEPVLSLGRIKADHIQFWRPSLYWNVMLQAQNADADTRLKIRDLMLTH VDGDIEMDAAQIVRTIDMTGLVATGRVNLSNSQIGNELLVSSALTLRNNHQTRRERREILNAALGGDTTRGEPRRASFRS LNMEDCRIETDVDLTGLDLREGLSAQHVTAGGTVMLAETGEDVPESFINCPARADFTGAKLYKLQASGSSFNALPPAEGG TLPAGLILDDAEVMLLRLFPKRGLGREETYPKPLGVSNLTVRHWKLLDSENEDFRSESEEAKTFLRLLKNDPRISRTTYL SIVSTLRDQGHERASSSVFRGLSWRTLGEGIRQTLNQLSPRRALFLPLQAASWLLTSAYGLLLGFGTAPLRLGALILGVG FLSYISVYNLNSNLEMRVSQEGEAPRYAAAIGNDACTNWQKTLVMLRHHVPVAVNEESETCRLRQYGSVNATPPLWLGAD PPVVPWPLSPLEFGVYMRLLALMLWPPFLAFALKRAFRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83113; Mature: 83113
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTTISAADFIGRILSGGGFHVGERYVVTGEVSLRGAILPRPLLLHGFLFEGPVDLSDT CCCEEECHHHHHHHHHCCCCEECCCEEEEEECEEECCCCCCCHHHHEEEHCCCCCCCCCC SVPGELDFSDCRFRRNLRLNQMHVQGSIRFRRVRIDLEEYQRDNSGGIGIDAVGLEADGD CCCCCCCHHHHHHHCCCCEEEEEEECCEEEEEEEEEHHHHCCCCCCCCEEEEEEECCCCC LRIEDLICSGGVQAAGLAVAGAADWQDIEIAHSLDLSGGQIGGRLQMSRCKVRGSINMMA EEEEEEEECCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEHHHCCCCEEEEE LNVRSHAEIGQVNVAGDCSLTSARIEQGLYIASTRIEGTLLISNAYMSALQIERQSPNVQ EEECCCCCCCEEEECCCCCCCHHHHHCCEEEEEEECCEEEEEEHHHHHHHHHHCCCCCCC GSHFGAISAYGLEISLGFKLCGATVGPHPSDPSEPVLSLGRIKADHIQFWRPSLYWNVML CCCCCEEEEEEEEEEECEEEECCCCCCCCCCCCCHHHHHHCCCHHHHHEECCCEEEEEEE QAQNADADTRLKIRDLMLTHVDGDIEMDAAQIVRTIDMTGLVATGRVNLSNSQIGNELLV EEECCCCCCEEEEEEEEEEECCCCCEECHHHHHHHHHHCCEEEECEEECCCCCCCHHHHH SSALTLRNNHQTRRERREILNAALGGDTTRGEPRRASFRSLNMEDCRIETDVDLTGLDLR HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEEECCCCEECCHHH EGLSAQHVTAGGTVMLAETGEDVPESFINCPARADFTGAKLYKLQASGSSFNALPPAEGG HCCCCCEEECCCEEEEECCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC TLPAGLILDDAEVMLLRLFPKRGLGREETYPKPLGVSNLTVRHWKLLDSENEDFRSESEE CCCCCEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHH AKTFLRLLKNDPRISRTTYLSIVSTLRDQGHERASSSVFRGLSWRTLGEGIRQTLNQLSP HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC RRALFLPLQAASWLLTSAYGLLLGFGTAPLRLGALILGVGFLSYISVYNLNSNLEMRVSQ CEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECC EGEAPRYAAAIGNDACTNWQKTLVMLRHHVPVAVNEESETCRLRQYGSVNATPPLWLGAD CCCCCCEEHHCCCCHHCCHHHHHHHHHHCCCEEECCCCCHHHHHHCCCCCCCCCEEECCC PPVVPWPLSPLEFGVYMRLLALMLWPPFLAFALKRAFRE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKTTTISAADFIGRILSGGGFHVGERYVVTGEVSLRGAILPRPLLLHGFLFEGPVDLSDT CCCEEECHHHHHHHHHCCCCEECCCEEEEEECEEECCCCCCCHHHHEEEHCCCCCCCCCC SVPGELDFSDCRFRRNLRLNQMHVQGSIRFRRVRIDLEEYQRDNSGGIGIDAVGLEADGD CCCCCCCHHHHHHHCCCCEEEEEEECCEEEEEEEEEHHHHCCCCCCCCEEEEEEECCCCC LRIEDLICSGGVQAAGLAVAGAADWQDIEIAHSLDLSGGQIGGRLQMSRCKVRGSINMMA EEEEEEEECCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEHHHCCCCEEEEE LNVRSHAEIGQVNVAGDCSLTSARIEQGLYIASTRIEGTLLISNAYMSALQIERQSPNVQ EEECCCCCCCEEEECCCCCCCHHHHHCCEEEEEEECCEEEEEEHHHHHHHHHHCCCCCCC GSHFGAISAYGLEISLGFKLCGATVGPHPSDPSEPVLSLGRIKADHIQFWRPSLYWNVML CCCCCEEEEEEEEEEECEEEECCCCCCCCCCCCCHHHHHHCCCHHHHHEECCCEEEEEEE QAQNADADTRLKIRDLMLTHVDGDIEMDAAQIVRTIDMTGLVATGRVNLSNSQIGNELLV EEECCCCCCEEEEEEEEEEECCCCCEECHHHHHHHHHHCCEEEECEEECCCCCCCHHHHH SSALTLRNNHQTRRERREILNAALGGDTTRGEPRRASFRSLNMEDCRIETDVDLTGLDLR HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEEECCCCEECCHHH EGLSAQHVTAGGTVMLAETGEDVPESFINCPARADFTGAKLYKLQASGSSFNALPPAEGG HCCCCCEEECCCEEEEECCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC TLPAGLILDDAEVMLLRLFPKRGLGREETYPKPLGVSNLTVRHWKLLDSENEDFRSESEE CCCCCEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHH AKTFLRLLKNDPRISRTTYLSIVSTLRDQGHERASSSVFRGLSWRTLGEGIRQTLNQLSP HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC RRALFLPLQAASWLLTSAYGLLLGFGTAPLRLGALILGVGFLSYISVYNLNSNLEMRVSQ CEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECC EGEAPRYAAAIGNDACTNWQKTLVMLRHHVPVAVNEESETCRLRQYGSVNATPPLWLGAD CCCCCCEEHHCCCCHHCCHHHHHHHHHHCCCEEECCCCCHHHHHHCCCCCCCCCEEECCC PPVVPWPLSPLEFGVYMRLLALMLWPPFLAFALKRAFRE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA