Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114800159

Identifier: 114800159

GI number: 114800159

Start: 2847083

End: 2847790

Strand: Reverse

Name: 114800159

Synonym: HNE_2687

Alternate gene names: NA

Gene position: 2847790-2847083 (Counterclockwise)

Preceding gene: 114800172

Following gene: 114799017

Centisome position: 76.86

GC content: 68.08

Gene sequence:

>708_bases
GTGGGCACGATGGTGAAGGCGGCGCCTGAAACGCGCACTTCCACACGGTCTGACACGCGCGCTTCGCCTTCCTGGATGAC
GCCGCGGCCCGGCAGGGCGTCAACGGCGGTGGTGTCGCCGGTGGCGTCGATGGCGAAGGTGACGTCGAACGCCCGCTTGT
ATTCGGCCGAGGGCGGCGTCTCATGGGCGACGGGCACGGTCTTCAGCTTGTCGATGAAGGATTCGGAGACGGCCGTGGTA
ACGTTGGGGTCGTCGATGTCGACCGCTTCGGGCGCGGTATCGGCGGTTGCCTCTTCGGCGCCCTCCGGGGCAGAGCGCAT
GGAGCGCATGGCCGGGCCTTCAGCTTCTGGGGCAGGCGCCTCTTCGCGCATGACTTCGAAGTTCAATTCTTCTTCGGTCA
GCGGGGCTGTTTCACTGCGCGCTTCCGGCTCGGCTTGCATCGGCGCATCAGGCTCTACCACCGGCTCAGGCAGGGGCGCA
GGCGGCGGCGGGGCAGCCTCTGTTCGGGGCGCTTCAGCGGAGGTGACGTCCGGCGGCGCGGCAGTCTCGGTCGTGTCGGG
CGCGGGGGCAGAGGCAGTGGCGAGCGGCTCACCCCGAGGCAAATGGGTGTCCATCAGGGCCGCGCCGCCGATGCCGGCTG
CAAGGAGACCTGCGATCACCAGAAGGATTGAAATAAAGCGCATCATGCTCGCGTCTCCCGGCCCGTAG

Upstream 100 bases:

>100_bases
GATCTCGAAGGTGAGGTCATGGTCGCCGGCGCTGAGCGCGGTGACCGACCAGCGCCAGGTGTTTTCCGTCAACGGCGAGA
GCGACTGAACGGGCGGTGAT

Downstream 100 bases:

>100_bases
TGTGGAGCAGTGTAACAGAGTCAGCGGGCAGGGAAACTGCCCCGGCTCGCCTCATAAAACGCAATTGCGGCAGCATTGGA
CACGTTGAGGCTTTCCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MGTMVKAAPETRTSTRSDTRASPSWMTPRPGRASTAVVSPVASMAKVTSNARLYSAEGGVSWATGTVFSLSMKDSETAVV
TLGSSMSTASGAVSAVASSAPSGAERMERMAGPSASGAGASSRMTSKFNSSSVSGAVSLRASGSACIGASGSTTGSGRGA
GGGGAASVRGASAEVTSGGAAVSVVSGAGAEAVASGSPRGKWVSIRAAPPMPAARRPAITRRIEIKRIMLASPGP

Sequences:

>Translated_235_residues
MGTMVKAAPETRTSTRSDTRASPSWMTPRPGRASTAVVSPVASMAKVTSNARLYSAEGGVSWATGTVFSLSMKDSETAVV
TLGSSMSTASGAVSAVASSAPSGAERMERMAGPSASGAGASSRMTSKFNSSSVSGAVSLRASGSACIGASGSTTGSGRGA
GGGGAASVRGASAEVTSGGAAVSVVSGAGAEAVASGSPRGKWVSIRAAPPMPAARRPAITRRIEIKRIMLASPGP
>Mature_234_residues
GTMVKAAPETRTSTRSDTRASPSWMTPRPGRASTAVVSPVASMAKVTSNARLYSAEGGVSWATGTVFSLSMKDSETAVVT
LGSSMSTASGAVSAVASSAPSGAERMERMAGPSASGAGASSRMTSKFNSSSVSGAVSLRASGSACIGASGSTTGSGRGAG
GGGAASVRGASAEVTSGGAAVSVVSGAGAEAVASGSPRGKWVSIRAAPPMPAARRPAITRRIEIKRIMLASPGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22831; Mature: 22700

Theoretical pI: Translated: 12.19; Mature: 12.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTMVKAAPETRTSTRSDTRASPSWMTPRPGRASTAVVSPVASMAKVTSNARLYSAEGGV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCC
SWATGTVFSLSMKDSETAVVTLGSSMSTASGAVSAVASSAPSGAERMERMAGPSASGAGA
EEECCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCC
SSRMTSKFNSSSVSGAVSLRASGSACIGASGSTTGSGRGAGGGGAASVRGASAEVTSGGA
CHHHHHCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
AVSVVSGAGAEAVASGSPRGKWVSIRAAPPMPAARRPAITRRIEIKRIMLASPGP
EEEEECCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHEEEEEEEEEECCCC
>Mature Secondary Structure 
GTMVKAAPETRTSTRSDTRASPSWMTPRPGRASTAVVSPVASMAKVTSNARLYSAEGGV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCC
SWATGTVFSLSMKDSETAVVTLGSSMSTASGAVSAVASSAPSGAERMERMAGPSASGAGA
EEECCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCC
SSRMTSKFNSSSVSGAVSLRASGSACIGASGSTTGSGRGAGGGGAASVRGASAEVTSGGA
CHHHHHCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
AVSVVSGAGAEAVASGSPRGKWVSIRAAPPMPAARRPAITRRIEIKRIMLASPGP
EEEEECCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA