Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is yvfT [H]

Identifier: 114800098

GI number: 114800098

Start: 1291683

End: 1293713

Strand: Direct

Name: yvfT [H]

Synonym: HNE_1263

Alternate gene names: 114800098

Gene position: 1291683-1293713 (Clockwise)

Preceding gene: 114799664

Following gene: 114798031

Centisome position: 34.86

GC content: 66.13

Gene sequence:

>2031_bases
ATGGCGGATGGGCGGGACACGCAAGGCGGCTGTGCCCCCCTGTTCGGGGGGTGGACCGGGGCGGGCGCATGGGGTGCTGG
CAGGGGCGCGCAGCAGTTTACATCCGGCGCGGGGCAGCATCAGATAGTGAGCGTCGGTATGGGGAAGAGGGCGGGCATGA
AGCTGCAGGATATGAATACGCCGCTGGTGCGCTTTGCGGTGCCGGCATTGATTGTCGTGGCGGTGACGGCCGGGATGGCG
GTCTGGGGGCTGCAGCCGGCGTCAGGATGGACGGGTGAGGTGAGCGCGTGGCGGTCGCCCTTCGCGGTGCATCCGGGGCT
GTGGGTGTCGCTGCTGGTCGGGTTTGGGGCGTGCCTGGTGTCGACCTGGGTGTGGGCGCTGAAGCCGGCGGACCCTGCGG
CGATCCTGTTTGCGGTGAGCGGGCTGACGACGCTGATGTTCTCGGTGTCCTCAACCGTGTGGCTGTTTGCGATGGTGTTG
CCCGACAGCGCCTACATGACGGCGGCGATCATCAACTGCATCGGCGCGTCGGGCTTTGGCATCGTGATGATGTGCCTGTT
CCTGATCTATCCGGTGAAGCTGCCCTATTGGCGCTGGCTGATGGCGGCGACGGTGCTGGGGTTTGGGGCGGTGACGTATT
GGGTGATGTTTGGTCCGTCGCCGGATTTCATGCTGGTGCATCCGATTACCTTCTGGGAGATGGTGGGCATCTTCGTGCTG
GTGGGCTGGCAGATCTTTGCGACGCGAGGTGATCCGGCGCAGCGGTCGATTGCGTTGTGGCTGGGCGCGGCGGTGGTGCT
GGGGGCGGGCGGGTTTATCTCGACGGTGGCGTTTCCGCATACGTTCGGGTTTCTGCCGCTGCTGAACGAGAACATCGCGT
TCGGATTTTTCCTGCTGATCTATGCGGCGCTGACCGTTGGGCTGATGCGCTTCCGCGTGTTCGGGCTGGGCGGCTGGGCG
TTCCAGCTGATGTTCCACTTCCTGGCGGCGTTGGGCGTTCTGGCGCTGGATCTGGCGCTGATCGGGATGCTCTCATTTGA
GCCGGGGGCGGCGTTCTCGGTGGCGCTGTTGCTGGCGGCGGCGGTGTATCTGCCGGTGCGCAGCCTGGCGTGGCGCAAGC
TGTCGGGGCAGGCGCGGCCCGATGAGGCGGAGCTGTTCCGGTCGGTGATCGACATTGCTCTGCGCCCCAGCGGAGAGCAG
CGGGCGGAGCGCTGGCGCAAGCTGATGCGGGATGTGTTCGGGCCGCTGGAGATCAAGGCCGTTGAGGCAGGCGGGGCAAA
GGTGCGCGTGGAGGATGAGGGCACGTTGATGCTGTTGCCGGCGGCGGCAGATTCCCCGCCGCTGAGCCTGCGCTATCGCA
ATGGCGGGCGGGCGCTCTATTCGCCCAAGGATGTCGCGCTGGCGACGCAGATCGTGAAGCTGATGCGGTATGCGGAGGAA
AACCGCAACGCCTATGACCGGGGCGTGTCAGAAGAACGCGCGCGGATTGCGCGGGACATTCACGACAATATCGGGGCGCA
GCTGCTGCGCGCGCTGCACTCGCGCGAGAGCGGCCGGAAGGACGCGATGATCCGCGAGACGCTGACCGACATCCGCGATG
TGATCAACAATGCGCAAGGCGCCGAGGCGCCGATGGAGGATGTGCTGGCGGACCTGCGGGCCGAGACGGCAGACCGGCTG
GAGCCGCATGGCGTCATGCTGAGCTGGAATTTGCATGCGGCACCCGGCGCGTTGCTGTCCCGGCAGAAGGTGCATGCGCT
GCGGGCGCTGATCCGGGAAGCGGTGAGCAACACGATCAAGCATGCAGAGGCGCGCTCGGTTGAGGTGACCATTCGTCTGG
ATGCGGACTGGCTCTCGCTGAAGGTGACCGATGATGGCAAGGGCATGCCGGCGCAGACGGCTTCGCTGGGCAATGGCCTG
GGAAATATGAAGCTGCGCGTGGAGAGCTTCGGCGGCGATATTTCGCTGGAGGGCGGGGAGGGCACGTGCCTCGCCGCGCG
TATTCCGGTGTTCGAGATGGCGGCGGAGTAG

Upstream 100 bases:

>100_bases
GGCAGGGCCAGGGCCAGAGCCAGGGTAAGTGCGGCGAGGGCGCCGGCAATCAGGTGCTTCGGACTGGTCATGGGCGCGCC
TCCGGGTTGCCGGCAGTATG

Downstream 100 bases:

>100_bases
GCCGGTCAGGTCCGGTCGGTGGTCAGGCCCATCCGGGTGGCGTGCCAGGAGGCTTCGGCGCGGGAGGAAATGCCGAGTTT
GCGGTAGATACCCTTGATGT

Product: putative sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 676; Mature: 675

Protein sequence:

>676_residues
MADGRDTQGGCAPLFGGWTGAGAWGAGRGAQQFTSGAGQHQIVSVGMGKRAGMKLQDMNTPLVRFAVPALIVVAVTAGMA
VWGLQPASGWTGEVSAWRSPFAVHPGLWVSLLVGFGACLVSTWVWALKPADPAAILFAVSGLTTLMFSVSSTVWLFAMVL
PDSAYMTAAIINCIGASGFGIVMMCLFLIYPVKLPYWRWLMAATVLGFGAVTYWVMFGPSPDFMLVHPITFWEMVGIFVL
VGWQIFATRGDPAQRSIALWLGAAVVLGAGGFISTVAFPHTFGFLPLLNENIAFGFFLLIYAALTVGLMRFRVFGLGGWA
FQLMFHFLAALGVLALDLALIGMLSFEPGAAFSVALLLAAAVYLPVRSLAWRKLSGQARPDEAELFRSVIDIALRPSGEQ
RAERWRKLMRDVFGPLEIKAVEAGGAKVRVEDEGTLMLLPAAADSPPLSLRYRNGGRALYSPKDVALATQIVKLMRYAEE
NRNAYDRGVSEERARIARDIHDNIGAQLLRALHSRESGRKDAMIRETLTDIRDVINNAQGAEAPMEDVLADLRAETADRL
EPHGVMLSWNLHAAPGALLSRQKVHALRALIREAVSNTIKHAEARSVEVTIRLDADWLSLKVTDDGKGMPAQTASLGNGL
GNMKLRVESFGGDISLEGGEGTCLAARIPVFEMAAE

Sequences:

>Translated_676_residues
MADGRDTQGGCAPLFGGWTGAGAWGAGRGAQQFTSGAGQHQIVSVGMGKRAGMKLQDMNTPLVRFAVPALIVVAVTAGMA
VWGLQPASGWTGEVSAWRSPFAVHPGLWVSLLVGFGACLVSTWVWALKPADPAAILFAVSGLTTLMFSVSSTVWLFAMVL
PDSAYMTAAIINCIGASGFGIVMMCLFLIYPVKLPYWRWLMAATVLGFGAVTYWVMFGPSPDFMLVHPITFWEMVGIFVL
VGWQIFATRGDPAQRSIALWLGAAVVLGAGGFISTVAFPHTFGFLPLLNENIAFGFFLLIYAALTVGLMRFRVFGLGGWA
FQLMFHFLAALGVLALDLALIGMLSFEPGAAFSVALLLAAAVYLPVRSLAWRKLSGQARPDEAELFRSVIDIALRPSGEQ
RAERWRKLMRDVFGPLEIKAVEAGGAKVRVEDEGTLMLLPAAADSPPLSLRYRNGGRALYSPKDVALATQIVKLMRYAEE
NRNAYDRGVSEERARIARDIHDNIGAQLLRALHSRESGRKDAMIRETLTDIRDVINNAQGAEAPMEDVLADLRAETADRL
EPHGVMLSWNLHAAPGALLSRQKVHALRALIREAVSNTIKHAEARSVEVTIRLDADWLSLKVTDDGKGMPAQTASLGNGL
GNMKLRVESFGGDISLEGGEGTCLAARIPVFEMAAE
>Mature_675_residues
ADGRDTQGGCAPLFGGWTGAGAWGAGRGAQQFTSGAGQHQIVSVGMGKRAGMKLQDMNTPLVRFAVPALIVVAVTAGMAV
WGLQPASGWTGEVSAWRSPFAVHPGLWVSLLVGFGACLVSTWVWALKPADPAAILFAVSGLTTLMFSVSSTVWLFAMVLP
DSAYMTAAIINCIGASGFGIVMMCLFLIYPVKLPYWRWLMAATVLGFGAVTYWVMFGPSPDFMLVHPITFWEMVGIFVLV
GWQIFATRGDPAQRSIALWLGAAVVLGAGGFISTVAFPHTFGFLPLLNENIAFGFFLLIYAALTVGLMRFRVFGLGGWAF
QLMFHFLAALGVLALDLALIGMLSFEPGAAFSVALLLAAAVYLPVRSLAWRKLSGQARPDEAELFRSVIDIALRPSGEQR
AERWRKLMRDVFGPLEIKAVEAGGAKVRVEDEGTLMLLPAAADSPPLSLRYRNGGRALYSPKDVALATQIVKLMRYAEEN
RNAYDRGVSEERARIARDIHDNIGAQLLRALHSRESGRKDAMIRETLTDIRDVINNAQGAEAPMEDVLADLRAETADRLE
PHGVMLSWNLHAAPGALLSRQKVHALRALIREAVSNTIKHAEARSVEVTIRLDADWLSLKVTDDGKGMPAQTASLGNGLG
NMKLRVESFGGDISLEGGEGTCLAARIPVFEMAAE

Specific function: Member of the two-component regulatory system yvfT/yvfU. Probably activates yvfU by phosphorylation [H]

COG id: COG4585

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011712 [H]

Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 72890; Mature: 72759

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADGRDTQGGCAPLFGGWTGAGAWGAGRGAQQFTSGAGQHQIVSVGMGKRAGMKLQDMNT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCEEECCCC
PLVRFAVPALIVVAVTAGMAVWGLQPASGWTGEVSAWRSPFAVHPGLWVSLLVGFGACLV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCEECCHHHHHHHHHHHHHHH
STWVWALKPADPAAILFAVSGLTTLMFSVSSTVWLFAMVLPDSAYMTAAIINCIGASGFG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHH
IVMMCLFLIYPVKLPYWRWLMAATVLGFGAVTYWVMFGPSPDFMLVHPITFWEMVGIFVL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEECCHHHHHHHHHHHH
VGWQIFATRGDPAQRSIALWLGAAVVLGAGGFISTVAFPHTFGFLPLLNENIAFGFFLLI
HHHEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHH
YAALTVGLMRFRVFGLGGWAFQLMFHFLAALGVLALDLALIGMLSFEPGAAFSVALLLAA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AVYLPVRSLAWRKLSGQARPDEAELFRSVIDIALRPSGEQRAERWRKLMRDVFGPLEIKA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEE
VEAGGAKVRVEDEGTLMLLPAAADSPPLSLRYRNGGRALYSPKDVALATQIVKLMRYAEE
EECCCCEEEEECCCEEEEEECCCCCCCCEEEEECCCCEECCCHHHHHHHHHHHHHHHHHH
NRNAYDRGVSEERARIARDIHDNIGAQLLRALHSRESGRKDAMIRETLTDIRDVINNAQG
CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
AEAPMEDVLADLRAETADRLEPHGVMLSWNLHAAPGALLSRQKVHALRALIREAVSNTIK
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HAEARSVEVTIRLDADWLSLKVTDDGKGMPAQTASLGNGLGNMKLRVESFGGDISLEGGE
HCCCCEEEEEEEECCCEEEEEECCCCCCCCCCHHHHCCCCCCEEEEEEECCCEEEEECCC
GTCLAARIPVFEMAAE
CEEEEEECCHHHHCCC
>Mature Secondary Structure 
ADGRDTQGGCAPLFGGWTGAGAWGAGRGAQQFTSGAGQHQIVSVGMGKRAGMKLQDMNT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCEEECCCC
PLVRFAVPALIVVAVTAGMAVWGLQPASGWTGEVSAWRSPFAVHPGLWVSLLVGFGACLV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCEECCHHHHHHHHHHHHHHH
STWVWALKPADPAAILFAVSGLTTLMFSVSSTVWLFAMVLPDSAYMTAAIINCIGASGFG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHH
IVMMCLFLIYPVKLPYWRWLMAATVLGFGAVTYWVMFGPSPDFMLVHPITFWEMVGIFVL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEECCHHHHHHHHHHHH
VGWQIFATRGDPAQRSIALWLGAAVVLGAGGFISTVAFPHTFGFLPLLNENIAFGFFLLI
HHHEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHH
YAALTVGLMRFRVFGLGGWAFQLMFHFLAALGVLALDLALIGMLSFEPGAAFSVALLLAA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AVYLPVRSLAWRKLSGQARPDEAELFRSVIDIALRPSGEQRAERWRKLMRDVFGPLEIKA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEE
VEAGGAKVRVEDEGTLMLLPAAADSPPLSLRYRNGGRALYSPKDVALATQIVKLMRYAEE
EECCCCEEEEECCCEEEEEECCCCCCCCEEEEECCCCEECCCHHHHHHHHHHHHHHHHHH
NRNAYDRGVSEERARIARDIHDNIGAQLLRALHSRESGRKDAMIRETLTDIRDVINNAQG
CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
AEAPMEDVLADLRAETADRLEPHGVMLSWNLHAAPGALLSRQKVHALRALIREAVSNTIK
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HAEARSVEVTIRLDADWLSLKVTDDGKGMPAQTASLGNGLGNMKLRVESFGGDISLEGGE
HCCCCEEEEEEEECCCEEEEEECCCCCCCCCCHHHHCCCCCCEEEEEEECCCEEEEECCC
GTCLAARIPVFEMAAE
CEEEEEECCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]