| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114798031
Identifier: 114798031
GI number: 114798031
Start: 1294441
End: 1295025
Strand: Direct
Name: 114798031
Synonym: HNE_1265
Alternate gene names: NA
Gene position: 1294441-1295025 (Clockwise)
Preceding gene: 114800098
Following gene: 114800472
Centisome position: 34.94
GC content: 67.35
Gene sequence:
>585_bases ATGCCGTGTTGCCGACCCACCGGAACAGGGGGGAGGACTTCTGCCGCCGAACCGTGGCATTTCCGGCATAGGACACCGGG GTTAGCCGATATGACCGACGCAAGAGAAAACAGCCGTCTGGGACATCTGTTCCGGCCGAGCCCCTTCAGCCGCGACCGGG CCTACTGGCTGGATGGGCATGTGCTGCGCTGGCGCAGCGGCGTTGAGAGCGGATGGCTGAGCCTGAGCGAGGTGACGCTT GTGCAGGTGACGCTGCCGCCGGCCGGGCATGGTACGGCGCGCTGCACTCTGCGGACGGCAGAATGCTGCGTGCATCGCTT TTCGGATGATTACTGGTTTGGCTGGAACCGCGTGGAGCGGCACCGCTGGGGCACGCGCGAGCACCGGCGCGCGACGTTTC TGGGCTTGGTGGCAGCGCTGGCACGGCGGGTGCGCAAGGCCAATCCGGCAGCAGCGCTGACGTACGGGCCGGACAAGGGC CGCCCGTTTGAGCCCGAAGAACTGGATCAGACCCAGGGATTTCCGGCCCGGCGGGAACCTGTTCCCCCCGAACGGGGGGA AGACGGAAACCCTGGCGCAGCCTAG
Upstream 100 bases:
>100_bases AGGATCAGGAGGCTCTTCACGGGTTCTTCACTTCCTAGCGGGGTACAAAGGCGCCTTCTGTTGAGGCGCGTTGGGGATAG AATGTCATACTACCTCCAAT
Downstream 100 bases:
>100_bases ACCTGCGCCGGGTTCACAGGTCCGGGGGGACGCACGTGGCCCAGGTTTACGCGATCTCAGATGACACTGACTTCTGCGGG GCTGACGGGGCGCCTTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MPCCRPTGTGGRTSAAEPWHFRHRTPGLADMTDARENSRLGHLFRPSPFSRDRAYWLDGHVLRWRSGVESGWLSLSEVTL VQVTLPPAGHGTARCTLRTAECCVHRFSDDYWFGWNRVERHRWGTREHRRATFLGLVAALARRVRKANPAAALTYGPDKG RPFEPEELDQTQGFPARREPVPPERGEDGNPGAA
Sequences:
>Translated_194_residues MPCCRPTGTGGRTSAAEPWHFRHRTPGLADMTDARENSRLGHLFRPSPFSRDRAYWLDGHVLRWRSGVESGWLSLSEVTL VQVTLPPAGHGTARCTLRTAECCVHRFSDDYWFGWNRVERHRWGTREHRRATFLGLVAALARRVRKANPAAALTYGPDKG RPFEPEELDQTQGFPARREPVPPERGEDGNPGAA >Mature_193_residues PCCRPTGTGGRTSAAEPWHFRHRTPGLADMTDARENSRLGHLFRPSPFSRDRAYWLDGHVLRWRSGVESGWLSLSEVTLV QVTLPPAGHGTARCTLRTAECCVHRFSDDYWFGWNRVERHRWGTREHRRATFLGLVAALARRVRKANPAAALTYGPDKGR PFEPEELDQTQGFPARREPVPPERGEDGNPGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21866; Mature: 21735
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCCRPTGTGGRTSAAEPWHFRHRTPGLADMTDARENSRLGHLFRPSPFSRDRAYWLDGH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEECCE VLRWRSGVESGWLSLSEVTLVQVTLPPAGHGTARCTLRTAECCVHRFSDDYWFGWNRVER EEEECCCCCCCCEEECCEEEEEEECCCCCCCCEEEEEEHHHHHHHHCCCCEEECCCHHHH HRWGTREHRRATFLGLVAALARRVRKANPAAALTYGPDKGRPFEPEELDQTQGFPARREP HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCC VPPERGEDGNPGAA CCCCCCCCCCCCCC >Mature Secondary Structure PCCRPTGTGGRTSAAEPWHFRHRTPGLADMTDARENSRLGHLFRPSPFSRDRAYWLDGH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEECCE VLRWRSGVESGWLSLSEVTLVQVTLPPAGHGTARCTLRTAECCVHRFSDDYWFGWNRVER EEEECCCCCCCCEEECCEEEEEEECCCCCCCCEEEEEEHHHHHHHHCCCCEEECCCHHHH HRWGTREHRRATFLGLVAALARRVRKANPAAALTYGPDKGRPFEPEELDQTQGFPARREP HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCC VPPERGEDGNPGAA CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA