Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114799952

Identifier: 114799952

GI number: 114799952

Start: 3621155

End: 3621865

Strand: Direct

Name: 114799952

Synonym: HNE_3487

Alternate gene names: NA

Gene position: 3621155-3621865 (Clockwise)

Preceding gene: 114797810

Following gene: 114799175

Centisome position: 97.74

GC content: 60.06

Gene sequence:

>711_bases
ATGGCCCGCACCTCGCCCGCCAAACCCAAACGCTCGCTTGTCCAGCGCCTGCTCCGCCGGGTGGTGTACAAGAATTATGG
CCGCAACCTGCTCTACCAGCTGCAGCTGCGCGCGTTGAATGAAGCGGCCGATTACGTTCAGGCGAACATGCCTGAGGCGA
TGATCTTCGAGAACTATCCCGCCTATATCGCCTTCCTGATGGAGAAGGCGCCGGCAGACGGTCTCGTCATGGAATTTGGC
GTGGCGGGCGGCAATTCCATCCGCCAGATTGCGTCGCGCACCTCAAAGACCGTTCACGGCTTTGACAGCTTTGAGGGGCT
GCCCGAAGACTGGGCCGGGCATCTGGAACGCCGCGGCGCCTTCACTCAGAAGCGCCAGCTTCCTGAGGTTCCGGCAAATG
TGAAGCTGCATGTCGGCTGGTTCGACGCGACCCTTCCCGGCATGCTGGCGGAAAATGCCGGCCCCGTCAGCCTGCTGCAT
ATCGACTGCGATCTTTATGGCGGCACAAAGTACATTCTCGATACGGCCGGCGACCGGCTTCAGCCCGGTTCCATCGTGAT
GTTCGACGAGTATTTCAATTACCCCAGCTGGCGCCATCACGAGTACAAAGCCTGGCAGGAATTCGTCAGCGCCCGGAGCG
TGAAATACACCTATCTTGCCTTTACGGCGATGGATGGCTGTGTTGCCGTCCGCATCGACGCAATCGGCTAG

Upstream 100 bases:

>100_bases
ACAAGGGCACCGTTGCCCGCCAGGTGGTTGTACTCGACTGATTGCGGCCCCGCCCGCACCCCGCTAGACAGGGCGCTTCG
CATCATAACGGAGCGCCCTG

Downstream 100 bases:

>100_bases
AGGTCCTTGCCTACCGCGTCCGCGATGGAAGAAAACCCATCTTCGGCCAGGCAATGGGAGAGCTCGCGCGCGACACGCGC
CGCAATGCCGGGGCCATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MARTSPAKPKRSLVQRLLRRVVYKNYGRNLLYQLQLRALNEAADYVQANMPEAMIFENYPAYIAFLMEKAPADGLVMEFG
VAGGNSIRQIASRTSKTVHGFDSFEGLPEDWAGHLERRGAFTQKRQLPEVPANVKLHVGWFDATLPGMLAENAGPVSLLH
IDCDLYGGTKYILDTAGDRLQPGSIVMFDEYFNYPSWRHHEYKAWQEFVSARSVKYTYLAFTAMDGCVAVRIDAIG

Sequences:

>Translated_236_residues
MARTSPAKPKRSLVQRLLRRVVYKNYGRNLLYQLQLRALNEAADYVQANMPEAMIFENYPAYIAFLMEKAPADGLVMEFG
VAGGNSIRQIASRTSKTVHGFDSFEGLPEDWAGHLERRGAFTQKRQLPEVPANVKLHVGWFDATLPGMLAENAGPVSLLH
IDCDLYGGTKYILDTAGDRLQPGSIVMFDEYFNYPSWRHHEYKAWQEFVSARSVKYTYLAFTAMDGCVAVRIDAIG
>Mature_235_residues
ARTSPAKPKRSLVQRLLRRVVYKNYGRNLLYQLQLRALNEAADYVQANMPEAMIFENYPAYIAFLMEKAPADGLVMEFGV
AGGNSIRQIASRTSKTVHGFDSFEGLPEDWAGHLERRGAFTQKRQLPEVPANVKLHVGWFDATLPGMLAENAGPVSLLHI
DCDLYGGTKYILDTAGDRLQPGSIVMFDEYFNYPSWRHHEYKAWQEFVSARSVKYTYLAFTAMDGCVAVRIDAIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26605; Mature: 26474

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTSPAKPKRSLVQRLLRRVVYKNYGRNLLYQLQLRALNEAADYVQANMPEAMIFENYP
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCH
AYIAFLMEKAPADGLVMEFGVAGGNSIRQIASRTSKTVHGFDSFEGLPEDWAGHLERRGA
HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCCC
FTQKRQLPEVPANVKLHVGWFDATLPGMLAENAGPVSLLHIDCDLYGGTKYILDTAGDRL
HHHHHCCCCCCCCEEEEEEEECCCCCHHHHCCCCCEEEEEEEEEEECCEEEEEECCCCCC
QPGSIVMFDEYFNYPSWRHHEYKAWQEFVSARSVKYTYLAFTAMDGCVAVRIDAIG
CCCCEEEEHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEEECCC
>Mature Secondary Structure 
ARTSPAKPKRSLVQRLLRRVVYKNYGRNLLYQLQLRALNEAADYVQANMPEAMIFENYP
CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCH
AYIAFLMEKAPADGLVMEFGVAGGNSIRQIASRTSKTVHGFDSFEGLPEDWAGHLERRGA
HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCCC
FTQKRQLPEVPANVKLHVGWFDATLPGMLAENAGPVSLLHIDCDLYGGTKYILDTAGDRL
HHHHHCCCCCCCCEEEEEEEECCCCCHHHHCCCCCEEEEEEEEEEECCEEEEEECCCCCC
QPGSIVMFDEYFNYPSWRHHEYKAWQEFVSARSVKYTYLAFTAMDGCVAVRIDAIG
CCCCEEEEHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA