| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799878
Identifier: 114799878
GI number: 114799878
Start: 293255
End: 293941
Strand: Reverse
Name: 114799878
Synonym: HNE_0298
Alternate gene names: NA
Gene position: 293941-293255 (Counterclockwise)
Preceding gene: 114798356
Following gene: 114797897
Centisome position: 7.93
GC content: 58.37
Gene sequence:
>687_bases ATGATCAAAGTGAACGGCATCCATCACATAGCCATCATGGCGGCAGATATTCGCGAGCATGTGGCGTTCTTTTCAGATGT TCTGGGCTGCAAGCTTTCAGCGATCTTCGACATGCACGGCGTGCCCGGCGGGGTTCATGCCTTTCTCCACATGGATGACC ATTCCTATTTCTCGATTGTTGAGTTGCCACAGGTGAAGGACATTCCGATCGAGCTTGGCGTCACCCATGCCGGAACCGGC GCAGCGCCATCCGCCCCCGGAACAATGCAGCATCTCGCCTTTCGCGTGGATACGCCCGAAGAATTGCTCGCCATCCGTGA CCGCATCCGGAAGAAGGGTGTGAACGTGATTGGCCCGCTGGATCATGCGATGTGCCAATCCATCTATTTTGCCGGCCCCG ACCAGCTGACCCTGGAAGTGGCGTGTTCGGATGAAGCAATCAATCCGGAAGCCTGGATTGATCCGGCCGTGATTGCGCGC CTCGGCATTTCTGATGAAGATCTGGCACGCTATAAGAGCCCGGACGCGTATGCTGGCGAAGGCGGCAGGGTGGCCCAGCC GCCATATGATCCGGCCAAGCCGCATCAGGCCTATCCCGAGCCGATGTACAAAGCGATGCTGGCGGCGCCGGATGAGGCGA TAACCAAGTCCGCGAAGTTTGAGCCCCCGGTCAAGATCGCGAGCTAG
Upstream 100 bases:
>100_bases CCTCCTTGCCCCAATTGGACTTGCAGCACATTATACCTTCAGAGCGCCGGGGCAACGGCGCCGTAGGGACAAGGCCGGAA GGCCGAGGGAGAACAAATCG
Downstream 100 bases:
>100_bases GCGCCTCGGCTCAGGTCTTTCAGGCGGTAAACAAGATCGAGCGCTTCGCGCGGCGTGAGGCTGTCGGGATCAGCGGCGGC AAGCGCTTCAATCACGGCAG
Product: glyoxalase family protein
Products: NA
Alternate protein names: Glyoxalase Family Protein
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MIKVNGIHHIAIMAADIREHVAFFSDVLGCKLSAIFDMHGVPGGVHAFLHMDDHSYFSIVELPQVKDIPIELGVTHAGTG AAPSAPGTMQHLAFRVDTPEELLAIRDRIRKKGVNVIGPLDHAMCQSIYFAGPDQLTLEVACSDEAINPEAWIDPAVIAR LGISDEDLARYKSPDAYAGEGGRVAQPPYDPAKPHQAYPEPMYKAMLAAPDEAITKSAKFEPPVKIAS
Sequences:
>Translated_228_residues MIKVNGIHHIAIMAADIREHVAFFSDVLGCKLSAIFDMHGVPGGVHAFLHMDDHSYFSIVELPQVKDIPIELGVTHAGTG AAPSAPGTMQHLAFRVDTPEELLAIRDRIRKKGVNVIGPLDHAMCQSIYFAGPDQLTLEVACSDEAINPEAWIDPAVIAR LGISDEDLARYKSPDAYAGEGGRVAQPPYDPAKPHQAYPEPMYKAMLAAPDEAITKSAKFEPPVKIAS >Mature_228_residues MIKVNGIHHIAIMAADIREHVAFFSDVLGCKLSAIFDMHGVPGGVHAFLHMDDHSYFSIVELPQVKDIPIELGVTHAGTG AAPSAPGTMQHLAFRVDTPEELLAIRDRIRKKGVNVIGPLDHAMCQSIYFAGPDQLTLEVACSDEAINPEAWIDPAVIAR LGISDEDLARYKSPDAYAGEGGRVAQPPYDPAKPHQAYPEPMYKAMLAAPDEAITKSAKFEPPVKIAS
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24641; Mature: 24641
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKVNGIHHIAIMAADIREHVAFFSDVLGCKLSAIFDMHGVPGGVHAFLHMDDHSYFSIV CEEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEE ELPQVKDIPIELGVTHAGTGAAPSAPGTMQHLAFRVDTPEELLAIRDRIRKKGVNVIGPL ECCCCCCCCEEEEEEECCCCCCCCCCCHHHHEEEECCCHHHHHHHHHHHHHCCCCEECCH DHAMCQSIYFAGPDQLTLEVACSDEAINPEAWIDPAVIARLGISDEDLARYKSPDAYAGE HHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHCCHHHHHHCCCCHHHHHHHCCCCCCCCC GGRVAQPPYDPAKPHQAYPEPMYKAMLAAPDEAITKSAKFEPPVKIAS CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MIKVNGIHHIAIMAADIREHVAFFSDVLGCKLSAIFDMHGVPGGVHAFLHMDDHSYFSIV CEEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEE ELPQVKDIPIELGVTHAGTGAAPSAPGTMQHLAFRVDTPEELLAIRDRIRKKGVNVIGPL ECCCCCCCCEEEEEEECCCCCCCCCCCHHHHEEEECCCHHHHHHHHHHHHHCCCCEECCH DHAMCQSIYFAGPDQLTLEVACSDEAINPEAWIDPAVIARLGISDEDLARYKSPDAYAGE HHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHCCHHHHHHCCCCHHHHHHHCCCCCCCCC GGRVAQPPYDPAKPHQAYPEPMYKAMLAAPDEAITKSAKFEPPVKIAS CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA