| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is maeB [H]
Identifier: 114797897
GI number: 114797897
Start: 288170
End: 290437
Strand: Reverse
Name: maeB [H]
Synonym: HNE_0296
Alternate gene names: 114797897
Gene position: 290437-288170 (Counterclockwise)
Preceding gene: 114799878
Following gene: 114799242
Centisome position: 7.84
GC content: 61.86
Gene sequence:
>2268_bases ATGACCACGCAGCGTCCGAGCTTCACCGATCAGGAAGCCCTTGATTTCCACTCCCACCCGACCGCCGGGAAAATCTCCAT GGTGCCCACAAAGCCCATGGGCACGCAGCGCGACCTGTCGCTGGCCTACAGCCCCGGTGTTGCTATCCCGGTGCTGGCGA TCGCGGAAAACCCGGACAAGGCGTATGACTATACCTCCAAGGGCAACCTTGTGGCGGTCATCTCCAACGGCACCGCCATC CTGGGGCTCGGCAATCTGGGGCCGATGGCCTCCAAGCCGGTGATGGAAGGAAAGTCGGTTCTTTTCAAACGCTTCGCGGA CATCGACAGCTTCGATGTGGAAGTTGACACGACCGATGTCGAAGACTTCATCCGCACCGTGCGCAATATCGGCGCGACCT GGGGCGGCATCAATCTGGAGGACATCTCCTCCCCTGCCTGCTTCATCATCGAGAGCCGCCTGCGCGACGAACTCGACATT CCGGTCTTCCATGACGACCAGCATGGCACCGCGATCATCGCCGCTGCCGGCCTGATCAATGCCTGCCACATCACCGGGCG CCAATTGAAAGACACCAAGGTCGCCATTTCGGGCGCCGGGGCTGCCGGTCTCTCGGTGGCTGGCCTCATCCGCCATCTGG GCGTGAAGGCAGAGAATATCCTGATCTGCGACACCGCCGGCGTGGTCTATGAAGGCCGCACCGAGAAGATGGACCAGTTC AAGTCCGCCTTCGCTGTCAAGACGGCCAAGCGCACGCTGACAGAAGCGATGGACGGGGCCGACGTGTTCCTCGGACTTTC GGTCAAGGGCGCGGTGACCAAAGAGATGGTCAAGTCGATGGCCAAGAACCCGATCATCTTTGCGATGGCAAACCCGGACC CGGAAATCACCCCCGAAGAGATCAAATCGGTCCGCAGCGATGCGATCATCGCCACGGGCCGGTCTGACTATCCAAACCAG GTGAACAATGTTCTGGGCTTTCCTTACATCTTCCGCGGCGCGCTCGACGTGCGCGCCCGCGGTATCAATGAGGAAATGAA GGTTGCCTGCGCCCGCGCGCTGGCCGAACTTGCCCGCGAAGATGTGCCCGATGAAGTGGCCGCCGCCTATCACGGCGCCC GGCCGAGCTTTGGCCGGGAATATATCATTCCAAGTCCGTTTGACCCGCGCCTGATCAGCTTCGTTCCACCCTTTGTCGCG CAGGCGGCCATGGATACCGGCGTGGCCCGCAAGCCGATTGCGGATATGGACAACTACCGCCGCTCGCTGATCCGCCGGGC GGACCCGTCGGCCGCCTTCCTTCAAGGCTTGCAGGCACGGGCCCGCGAGACCCAGCGCCGCATCGTGTTTGCTGAAGGTG AAGAACCCGCCGTCGTGCGCGCCGCCTACAGCTTCAAGAACCAAGGCCTTGGCCATCCGATCCTGATTGGCCGCGAGGCC CAGGTGGAGCGCGCGATGGAGCAGATGGGCATTCCGCTCGGCTCGCTCGATATCATCAATGCGCGCCTTTCCGACAAGAA CCCGGTCTATGTCGACTTCCTGTATGAGCGCCTGCAGCGCCGCGGCTATCTCAAGCGCGACGTTCAGCGCCTGGTGAATC AGGACAGGAACATCTTCGGCAGCTGTATGCTTAAGAATGGCGACGCGGACGGCATGGTCACGGGCGTCACACGCAATTAC GACGCCGCCCTGAAAGACGCGATGCTGGTGCTCGACCCGATTGCGGGCCAGGCCCTGATCGGCATGTCGATGGTGATCAA TCTCGGCAAGACGATCTTCATTGCCGATACCAGCGTACATGAACTGCCCGACGGGCCGACCCTGGCAAACATCGCCCTGG AAGCGGCCCGCGCGGTGCGCGCCCTTGGCTTCACCCCGCGCGTGGCTTTCCTGTCCTACTCCACCTTCGGCAATCCGATG GGCGAGCGGGGCGACCGGGTGCGCGAAGCTGTGGCGATCCTTGATCAGCGCACGGACATTGATTTCGAGTATGAAGGCGA CATCAATGCTGATGTGGCGATGAACCCGAACCACCGGATGGTGTATCCGTTCTCGCGCCTCAGCGGCCCGGCGAACGTGT TGGTCATGCCGGCGATCCATTCGGCCTCGATTGCGACCAATCTGTTGGAAGCGATGAGCCGGGCAACCGTCATCGGACCG ATGCTGTTTGGCCTGGAAAAGCCGGTGCAGATTTCTTCACTCGGCGCCACTGTGGGCGACATCGTGGACCTTGCCACGAT TGCAGCCTACGACACCGACAACGTCTAA
Upstream 100 bases:
>100_bases ACCTGCGCACCCATTTCACTGTTGGCACGGCCCTCGGCGCGGCCTAGACGGGACGAAGAGCGACATCAATGACAAAAACA ACCGTCCGAGCGAACCCGAA
Downstream 100 bases:
>100_bases GGCCTTCCGCCAGAAAGATCACACCCCGGCTGCGTCCAGCGCGGCCGGGGTTTTCTGTCTGGCCATTCGCGCCCATTCCA GCAGTGAGAGCACCACGGCA
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 755; Mature: 754
Protein sequence:
>755_residues MTTQRPSFTDQEALDFHSHPTAGKISMVPTKPMGTQRDLSLAYSPGVAIPVLAIAENPDKAYDYTSKGNLVAVISNGTAI LGLGNLGPMASKPVMEGKSVLFKRFADIDSFDVEVDTTDVEDFIRTVRNIGATWGGINLEDISSPACFIIESRLRDELDI PVFHDDQHGTAIIAAAGLINACHITGRQLKDTKVAISGAGAAGLSVAGLIRHLGVKAENILICDTAGVVYEGRTEKMDQF KSAFAVKTAKRTLTEAMDGADVFLGLSVKGAVTKEMVKSMAKNPIIFAMANPDPEITPEEIKSVRSDAIIATGRSDYPNQ VNNVLGFPYIFRGALDVRARGINEEMKVACARALAELAREDVPDEVAAAYHGARPSFGREYIIPSPFDPRLISFVPPFVA QAAMDTGVARKPIADMDNYRRSLIRRADPSAAFLQGLQARARETQRRIVFAEGEEPAVVRAAYSFKNQGLGHPILIGREA QVERAMEQMGIPLGSLDIINARLSDKNPVYVDFLYERLQRRGYLKRDVQRLVNQDRNIFGSCMLKNGDADGMVTGVTRNY DAALKDAMLVLDPIAGQALIGMSMVINLGKTIFIADTSVHELPDGPTLANIALEAARAVRALGFTPRVAFLSYSTFGNPM GERGDRVREAVAILDQRTDIDFEYEGDINADVAMNPNHRMVYPFSRLSGPANVLVMPAIHSASIATNLLEAMSRATVIGP MLFGLEKPVQISSLGATVGDIVDLATIAAYDTDNV
Sequences:
>Translated_755_residues MTTQRPSFTDQEALDFHSHPTAGKISMVPTKPMGTQRDLSLAYSPGVAIPVLAIAENPDKAYDYTSKGNLVAVISNGTAI LGLGNLGPMASKPVMEGKSVLFKRFADIDSFDVEVDTTDVEDFIRTVRNIGATWGGINLEDISSPACFIIESRLRDELDI PVFHDDQHGTAIIAAAGLINACHITGRQLKDTKVAISGAGAAGLSVAGLIRHLGVKAENILICDTAGVVYEGRTEKMDQF KSAFAVKTAKRTLTEAMDGADVFLGLSVKGAVTKEMVKSMAKNPIIFAMANPDPEITPEEIKSVRSDAIIATGRSDYPNQ VNNVLGFPYIFRGALDVRARGINEEMKVACARALAELAREDVPDEVAAAYHGARPSFGREYIIPSPFDPRLISFVPPFVA QAAMDTGVARKPIADMDNYRRSLIRRADPSAAFLQGLQARARETQRRIVFAEGEEPAVVRAAYSFKNQGLGHPILIGREA QVERAMEQMGIPLGSLDIINARLSDKNPVYVDFLYERLQRRGYLKRDVQRLVNQDRNIFGSCMLKNGDADGMVTGVTRNY DAALKDAMLVLDPIAGQALIGMSMVINLGKTIFIADTSVHELPDGPTLANIALEAARAVRALGFTPRVAFLSYSTFGNPM GERGDRVREAVAILDQRTDIDFEYEGDINADVAMNPNHRMVYPFSRLSGPANVLVMPAIHSASIATNLLEAMSRATVIGP MLFGLEKPVQISSLGATVGDIVDLATIAAYDTDNV >Mature_754_residues TTQRPSFTDQEALDFHSHPTAGKISMVPTKPMGTQRDLSLAYSPGVAIPVLAIAENPDKAYDYTSKGNLVAVISNGTAIL GLGNLGPMASKPVMEGKSVLFKRFADIDSFDVEVDTTDVEDFIRTVRNIGATWGGINLEDISSPACFIIESRLRDELDIP VFHDDQHGTAIIAAAGLINACHITGRQLKDTKVAISGAGAAGLSVAGLIRHLGVKAENILICDTAGVVYEGRTEKMDQFK SAFAVKTAKRTLTEAMDGADVFLGLSVKGAVTKEMVKSMAKNPIIFAMANPDPEITPEEIKSVRSDAIIATGRSDYPNQV NNVLGFPYIFRGALDVRARGINEEMKVACARALAELAREDVPDEVAAAYHGARPSFGREYIIPSPFDPRLISFVPPFVAQ AAMDTGVARKPIADMDNYRRSLIRRADPSAAFLQGLQARARETQRRIVFAEGEEPAVVRAAYSFKNQGLGHPILIGREAQ VERAMEQMGIPLGSLDIINARLSDKNPVYVDFLYERLQRRGYLKRDVQRLVNQDRNIFGSCMLKNGDADGMVTGVTRNYD AALKDAMLVLDPIAGQALIGMSMVINLGKTIFIADTSVHELPDGPTLANIALEAARAVRALGFTPRVAFLSYSTFGNPMG ERGDRVREAVAILDQRTDIDFEYEGDINADVAMNPNHRMVYPFSRLSGPANVLVMPAIHSASIATNLLEAMSRATVIGPM LFGLEKPVQISSLGATVGDIVDLATIAAYDTDNV
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=342, Percent_Identity=26.9005847953216, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI62420882, Length=349, Percent_Identity=26.647564469914, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI62420880, Length=349, Percent_Identity=26.647564469914, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI239049447, Length=349, Percent_Identity=26.647564469914, Blast_Score=74, Evalue=4e-13, Organism=Escherichia coli, GI1788806, Length=750, Percent_Identity=46.8, Blast_Score=652, Evalue=0.0, Organism=Escherichia coli, GI1788635, Length=325, Percent_Identity=29.5384615384615, Blast_Score=133, Evalue=4e-32, Organism=Escherichia coli, GI1788800, Length=313, Percent_Identity=27.4760383386581, Blast_Score=96, Evalue=1e-20, Organism=Escherichia coli, GI87081919, Length=281, Percent_Identity=27.0462633451957, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17537199, Length=362, Percent_Identity=24.8618784530387, Blast_Score=70, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6322823, Length=269, Percent_Identity=31.2267657992565, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24646388, Length=351, Percent_Identity=29.9145299145299, Blast_Score=91, Evalue=3e-18, Organism=Drosophila melanogaster, GI24646386, Length=351, Percent_Identity=29.9145299145299, Blast_Score=91, Evalue=4e-18, Organism=Drosophila melanogaster, GI281363505, Length=371, Percent_Identity=24.2587601078167, Blast_Score=80, Evalue=8e-15, Organism=Drosophila melanogaster, GI78707236, Length=371, Percent_Identity=24.2587601078167, Blast_Score=80, Evalue=8e-15, Organism=Drosophila melanogaster, GI78707232, Length=371, Percent_Identity=24.2587601078167, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI281363503, Length=371, Percent_Identity=24.2587601078167, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI78707242, Length=265, Percent_Identity=25.6603773584906, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI78707238, Length=265, Percent_Identity=25.6603773584906, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI78707240, Length=265, Percent_Identity=25.6603773584906, Blast_Score=74, Evalue=5e-13, Organism=Drosophila melanogaster, GI21356279, Length=345, Percent_Identity=26.9565217391304, Blast_Score=73, Evalue=7e-13, Organism=Drosophila melanogaster, GI281362674, Length=345, Percent_Identity=26.9565217391304, Blast_Score=73, Evalue=8e-13, Organism=Drosophila melanogaster, GI281362672, Length=345, Percent_Identity=26.9565217391304, Blast_Score=73, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 81660; Mature: 81529
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQRPSFTDQEALDFHSHPTAGKISMVPTKPMGTQRDLSLAYSPGVAIPVLAIAENPDK CCCCCCCCCCHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCEEEEEEECCCCH AYDYTSKGNLVAVISNGTAILGLGNLGPMASKPVMEGKSVLFKRFADIDSFDVEVDTTDV HCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCH EDFIRTVRNIGATWGGINLEDISSPACFIIESRLRDELDIPVFHDDQHGTAIIAAAGLIN HHHHHHHHHCCCCCCCCCHHHCCCCCEEEEHHHHHCCCCCCEEECCCCCCEEEEHHHHHH ACHITGRQLKDTKVAISGAGAAGLSVAGLIRHLGVKAENILICDTAGVVYEGRTEKMDQF HHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCHHHHHHH KSAFAVKTAKRTLTEAMDGADVFLGLSVKGAVTKEMVKSMAKNPIIFAMANPDPEITPEE HHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHH IKSVRSDAIIATGRSDYPNQVNNVLGFPYIFRGALDVRARGINEEMKVACARALAELARE HHHHHCCEEEEECCCCCCHHHHHHCCCHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHH DVPDEVAAAYHGARPSFGREYIIPSPFDPRLISFVPPFVAQAAMDTGVARKPIADMDNYR CCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHH RSLIRRADPSAAFLQGLQARARETQRRIVFAEGEEPAVVRAAYSFKNQGLGHPILIGREA HHHHHHCCCHHHHHHHHHHHHHHHHCEEEEECCCCCEEEEEEHHHHCCCCCCCEEECCHH QVERAMEQMGIPLGSLDIINARLSDKNPVYVDFLYERLQRRGYLKRDVQRLVNQDRNIFG HHHHHHHHHCCCCCCCCEEEEECCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHCCCCEEE SCMLKNGDADGMVTGVTRNYDAALKDAMLVLDPIAGQALIGMSMVINLGKTIFIADTSVH EEEEECCCCCCEEEEECCCCHHHHHHHHHEECCCCCHHHHHHHHHHHCCCEEEEECCCHH ELPDGPTLANIALEAARAVRALGFTPRVAFLSYSTFGNPMGERGDRVREAVAILDQRTDI CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEHHCCCCCCHHHHHHHHHHHHHHCCCCC DFEYEGDINADVAMNPNHRMVYPFSRLSGPANVLVMPAIHSASIATNLLEAMSRATVIGP CEEECCCCCCEEEECCCCCEEEEHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH MLFGLEKPVQISSLGATVGDIVDLATIAAYDTDNV HHHCCCCCCCHHHHCCHHHHHHHHHHHEECCCCCC >Mature Secondary Structure TTQRPSFTDQEALDFHSHPTAGKISMVPTKPMGTQRDLSLAYSPGVAIPVLAIAENPDK CCCCCCCCCHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCEEEEEEECCCCH AYDYTSKGNLVAVISNGTAILGLGNLGPMASKPVMEGKSVLFKRFADIDSFDVEVDTTDV HCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCH EDFIRTVRNIGATWGGINLEDISSPACFIIESRLRDELDIPVFHDDQHGTAIIAAAGLIN HHHHHHHHHCCCCCCCCCHHHCCCCCEEEEHHHHHCCCCCCEEECCCCCCEEEEHHHHHH ACHITGRQLKDTKVAISGAGAAGLSVAGLIRHLGVKAENILICDTAGVVYEGRTEKMDQF HHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCHHHHHHH KSAFAVKTAKRTLTEAMDGADVFLGLSVKGAVTKEMVKSMAKNPIIFAMANPDPEITPEE HHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHH IKSVRSDAIIATGRSDYPNQVNNVLGFPYIFRGALDVRARGINEEMKVACARALAELARE HHHHHCCEEEEECCCCCCHHHHHHCCCHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHH DVPDEVAAAYHGARPSFGREYIIPSPFDPRLISFVPPFVAQAAMDTGVARKPIADMDNYR CCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHH RSLIRRADPSAAFLQGLQARARETQRRIVFAEGEEPAVVRAAYSFKNQGLGHPILIGREA HHHHHHCCCHHHHHHHHHHHHHHHHCEEEEECCCCCEEEEEEHHHHCCCCCCCEEECCHH QVERAMEQMGIPLGSLDIINARLSDKNPVYVDFLYERLQRRGYLKRDVQRLVNQDRNIFG HHHHHHHHHCCCCCCCCEEEEECCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHCCCCEEE SCMLKNGDADGMVTGVTRNYDAALKDAMLVLDPIAGQALIGMSMVINLGKTIFIADTSVH EEEEECCCCCCEEEEECCCCHHHHHHHHHEECCCCCHHHHHHHHHHHCCCEEEEECCCHH ELPDGPTLANIALEAARAVRALGFTPRVAFLSYSTFGNPMGERGDRVREAVAILDQRTDI CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEHHCCCCCCHHHHHHHHHHHHHHCCCCC DFEYEGDINADVAMNPNHRMVYPFSRLSGPANVLVMPAIHSASIATNLLEAMSRATVIGP CEEECCCCCCEEEECCCCCEEEEHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH MLFGLEKPVQISSLGATVGDIVDLATIAAYDTDNV HHHCCCCCCCHHHHCCHHHHHHHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9535928; 11481430; 10407149 [H]