| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798356
Identifier: 114798356
GI number: 114798356
Start: 295227
End: 295631
Strand: Reverse
Name: 114798356
Synonym: HNE_0300
Alternate gene names: NA
Gene position: 295631-295227 (Counterclockwise)
Preceding gene: 114797474
Following gene: 114799878
Centisome position: 7.98
GC content: 65.93
Gene sequence:
>405_bases ATGAAACCGCTGACTGTCGCGCTTCTCTTTTCCCTGGCTGCCACCGGCGCTGCCTGCTCGGACACGGTGAAACCCACCGC CGAAGCGGCGCCGCCTGCGGCCGCTGAAGGGGACGCCCTCTCTGTCGACACCTCCACGGCAACGTCCGAAACGGAAATGA GCGGCACGCTGAACCTGAATATCGGCGCCCCTCAGGAAGGCGCGCCGCGTCTGCTCGGCTCAGGCGGCCTGGGCGGCTCT GAGCAAAGCGGCGTCGTGCTTGGCTCTGGTGGCCTCGGCGGCGGCAATTTCGGCGAGAGCCTCGATCTCGGGATCAATCT CGACGAACTGGAAGAACCTGCCACGCCCCTGGACGCGCCGGCTGAAGCATCCGACGAAGACGAGATCATACGCCTTCCGG ACTGA
Upstream 100 bases:
>100_bases TAAACGTCTCTCGGGCATTGATGCCGCTGCCAAATTCTGGGACGTTGTGCAGGCAAAGCTTGCGGCGGCGTGATCCGTGC GCCATTTTCGGGGAATGATT
Downstream 100 bases:
>100_bases CCGGCATCAGCCCGCGAAGCTTTCCGCTTCCATCCATTCCCTGCAAGCACTGACGGCCTCCGGCAACAGGTCCGGGCGCT CGATATAGTAATGATCGGCA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MKPLTVALLFSLAATGAACSDTVKPTAEAAPPAAAEGDALSVDTSTATSETEMSGTLNLNIGAPQEGAPRLLGSGGLGGS EQSGVVLGSGGLGGGNFGESLDLGINLDELEEPATPLDAPAEASDEDEIIRLPD
Sequences:
>Translated_134_residues MKPLTVALLFSLAATGAACSDTVKPTAEAAPPAAAEGDALSVDTSTATSETEMSGTLNLNIGAPQEGAPRLLGSGGLGGS EQSGVVLGSGGLGGGNFGESLDLGINLDELEEPATPLDAPAEASDEDEIIRLPD >Mature_134_residues MKPLTVALLFSLAATGAACSDTVKPTAEAAPPAAAEGDALSVDTSTATSETEMSGTLNLNIGAPQEGAPRLLGSGGLGGS EQSGVVLGSGGLGGGNFGESLDLGINLDELEEPATPLDAPAEASDEDEIIRLPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13120; Mature: 13120
Theoretical pI: Translated: 3.43; Mature: 3.43
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLTVALLFSLAATGAACSDTVKPTAEAAPPAAAEGDALSVDTSTATSETEMSGTLNLN CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEE IGAPQEGAPRLLGSGGLGGSEQSGVVLGSGGLGGGNFGESLDLGINLDELEEPATPLDAP ECCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCHHHHCCCCCCCCCC AEASDEDEIIRLPD CCCCCCCCEEECCC >Mature Secondary Structure MKPLTVALLFSLAATGAACSDTVKPTAEAAPPAAAEGDALSVDTSTATSETEMSGTLNLN CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEE IGAPQEGAPRLLGSGGLGGSEQSGVVLGSGGLGGGNFGESLDLGINLDELEEPATPLDAP ECCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCHHHHCCCCCCCCCC AEASDEDEIIRLPD CCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA