Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114799849

Identifier: 114799849

GI number: 114799849

Start: 3219040

End: 3219960

Strand: Direct

Name: 114799849

Synonym: HNE_3049

Alternate gene names: NA

Gene position: 3219040-3219960 (Clockwise)

Preceding gene: 114798648

Following gene: 114797059

Centisome position: 86.88

GC content: 58.52

Gene sequence:

>921_bases
ATGCGAACCGACCTCGACCACCTCCCTCATGGCAAGCAGCGCGAACTCGCCCGCGTGACGGAGATCCTGTTCGAGGAATT
CACCGACGCCATGAAAGGCGCTTCTTCCCCGAAGAAGAAGGAAGGCCGCATCCTCAAGATTATTCTGTTCGGATCCTATG
CGCGCGGCACTTGGGTGGACGAGCCCCACACGGAAAAGGGCTATCTCAGCGACTACGACCTGCTGATCGTCGTCAACCAG
CAGAGCGTGGTCGATTTTGCCACCTATTGGTACCGCGCCGAAGACCGGATCATGCGGGAGACCGGGATCAGGACCCCGGT
CAATTTCATTGTCCACACGATGGACGAGGTGAACTCCGCCCTCTCCCAGGGCCAGTATTTCTTCACTGACGTCGTCAAAG
AGGGCGTCGCGCTCTACGATCTCAAAGGAAGCACGCAGTTTATCACGCCCCAGCCGCAGACGGCGGAAGAGGCACTGGCG
ACCGCGGAGAAGCATTTTGAGCAACGCATTGAAGGCGTGCGAAGCGCGCTAGAATTCTTCAGATTTGGCGTAGATGCAGG
ACGTTACAATGATGCGTCGTTCATGCTGCATCAGGCTGTAGAGCGCCTCTACGCTTGCCTGCTCCTTGTAGAGACGAACT
ATTCGCCTTCGACCCACAGCATCAAGTTCCTCCGCTCGCTGGCTGAGCAGATCGACCCGGACCTGATTGCCGTCTGGCCG
CGTGAGACCAAGCAGGACCGGCGGCTGTTTGAATTGCTCAAGCGCGCCTATGTCGATGCGCGGTACTCAGAGCATTATGC
TATCACGGCCGAAGAGCTTGCCTGGCTGGGGGAGCGGGCGGAGATCCTGCGAGCACTCGTTGAGAAGCGGGCGAGCGGCA
AGATCGAACAATTGAAGGCCAGGGCATTGAACGGGGACTGA

Upstream 100 bases:

>100_bases
GGCGCAGCGCGCCCTGCCTCCCCTTCCTGCTTACAAGAGACCCGACTGAAGGGAGGATTGACGCTTTGCACGCCGTGCGG
CGCTCCTTAAGATGACGATG

Downstream 100 bases:

>100_bases
GTTCTATGCCGTCAGCCTGCTCAAAAGTTATCTGGCGCAAGGACGAGGGCTCCGCCGAAGGGACGCATAGGTGACAGCCC
TTGCCCGGTGCCGGCGTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Nucleotidyltransferase Protein; DNA Polymerase Beta Domain Protein Region; HEPN Domain-Containing Protein; Hepn Domain Protein; Nucleotidyltransferase/HEPN Domain-Containing Protein; Xin-Antitoxin System Toxin Component; HEPN Domain Protein; DNA Polymerase Beta Subunit; Nucleotidyltransferase Domain-Containing Protein

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MRTDLDHLPHGKQRELARVTEILFEEFTDAMKGASSPKKKEGRILKIILFGSYARGTWVDEPHTEKGYLSDYDLLIVVNQ
QSVVDFATYWYRAEDRIMRETGIRTPVNFIVHTMDEVNSALSQGQYFFTDVVKEGVALYDLKGSTQFITPQPQTAEEALA
TAEKHFEQRIEGVRSALEFFRFGVDAGRYNDASFMLHQAVERLYACLLLVETNYSPSTHSIKFLRSLAEQIDPDLIAVWP
RETKQDRRLFELLKRAYVDARYSEHYAITAEELAWLGERAEILRALVEKRASGKIEQLKARALNGD

Sequences:

>Translated_306_residues
MRTDLDHLPHGKQRELARVTEILFEEFTDAMKGASSPKKKEGRILKIILFGSYARGTWVDEPHTEKGYLSDYDLLIVVNQ
QSVVDFATYWYRAEDRIMRETGIRTPVNFIVHTMDEVNSALSQGQYFFTDVVKEGVALYDLKGSTQFITPQPQTAEEALA
TAEKHFEQRIEGVRSALEFFRFGVDAGRYNDASFMLHQAVERLYACLLLVETNYSPSTHSIKFLRSLAEQIDPDLIAVWP
RETKQDRRLFELLKRAYVDARYSEHYAITAEELAWLGERAEILRALVEKRASGKIEQLKARALNGD
>Mature_306_residues
MRTDLDHLPHGKQRELARVTEILFEEFTDAMKGASSPKKKEGRILKIILFGSYARGTWVDEPHTEKGYLSDYDLLIVVNQ
QSVVDFATYWYRAEDRIMRETGIRTPVNFIVHTMDEVNSALSQGQYFFTDVVKEGVALYDLKGSTQFITPQPQTAEEALA
TAEKHFEQRIEGVRSALEFFRFGVDAGRYNDASFMLHQAVERLYACLLLVETNYSPSTHSIKFLRSLAEQIDPDLIAVWP
RETKQDRRLFELLKRAYVDARYSEHYAITAEELAWLGERAEILRALVEKRASGKIEQLKARALNGD

Specific function: Unknown

COG id: COG1708

COG function: function code R; Predicted nucleotidyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35177; Mature: 35177

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTDLDHLPHGKQRELARVTEILFEEFTDAMKGASSPKKKEGRILKIILFGSYARGTWVD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCC
EPHTEKGYLSDYDLLIVVNQQSVVDFATYWYRAEDRIMRETGIRTPVNFIVHTMDEVNSA
CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LSQGQYFFTDVVKEGVALYDLKGSTQFITPQPQTAEEALATAEKHFEQRIEGVRSALEFF
HHCCCHHHHHHHHCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RFGVDAGRYNDASFMLHQAVERLYACLLLVETNYSPSTHSIKFLRSLAEQIDPDLIAVWP
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCEEEECC
RETKQDRRLFELLKRAYVDARYSEHYAITAEELAWLGERAEILRALVEKRASGKIEQLKA
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RALNGD
HHCCCC
>Mature Secondary Structure
MRTDLDHLPHGKQRELARVTEILFEEFTDAMKGASSPKKKEGRILKIILFGSYARGTWVD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCC
EPHTEKGYLSDYDLLIVVNQQSVVDFATYWYRAEDRIMRETGIRTPVNFIVHTMDEVNSA
CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LSQGQYFFTDVVKEGVALYDLKGSTQFITPQPQTAEEALATAEKHFEQRIEGVRSALEFF
HHCCCHHHHHHHHCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RFGVDAGRYNDASFMLHQAVERLYACLLLVETNYSPSTHSIKFLRSLAEQIDPDLIAVWP
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCEEEECC
RETKQDRRLFELLKRAYVDARYSEHYAITAEELAWLGERAEILRALVEKRASGKIEQLKA
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RALNGD
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA