Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114798384

Identifier: 114798384

GI number: 114798384

Start: 980928

End: 982763

Strand: Direct

Name: 114798384

Synonym: HNE_0967

Alternate gene names: NA

Gene position: 980928-982763 (Clockwise)

Preceding gene: 114799642

Following gene: 114799361

Centisome position: 26.48

GC content: 61.49

Gene sequence:

>1836_bases
GTGAGCTTGAGATACTGGGTGAGCGTCAGGCCCGCCGGGCCAGCGCCGACAATTGCCAGGGAAGTCCGGTTTGTCGGGCT
CATAGAGAGTTATTCTTTGGTTAACGCGACCGTGAAGGTCACACGGTTCGGTAAAAACCCATCTTCATCATGTCCTGTTA
GTAACGGTCGCATGAAGATGTCGATAGGCCTGTCAGACGTTGTACTTTTCCCGATCGTTGGGGTCGGGAGATTCAAGCGC
CGTGAGACGCCTGACATCCCTGCCTATATGCACCATCGTCTGGTGTCACTACTTACGGTGATGGGCTTCATCAACCTCGT
CAATTCTGCCGCAGTTGTGTTCACTCTGTTTGGCACCACCAATACTGCGCTGCTGTTTGGATGGATGATCCCGATCTGGG
TTTTTGCGATCTCGCAGATCGCCTGGAGCCGCAGCCGCTGGGACCGTTCGCCCACCCGTCCGGTCCGGGGACGCTTCCTG
CGCAAGGCAGAAGTTGCCACCGGCGTTGTCGGCGCCTGGTGGGGTCTGTGCGTGATGCTCGCGCCGGTGGGCGATGTCGG
CCTCAAGGTTTCGATGTTTGCCATCGTGTTCGGCATGTGCGCCGGTGTGGTGGCGGTTGTCTCGCCGGTTGCCAACGTGG
CGGCCCGCTTCCTGCTGGGCGCGGCGACCACGGCGACGATCGGATTTTTCCTCGCGCCGGTGGGCTTGCCCGCCACCATC
GTCATGCTGGGCCTGGTGCTGACGCTTGCCTCGGCGTTTGCCAGCCTCAACGCTTATCGCAACCTGCTGATGGAGATGGA
AGCCAAACGCCTGGCCGCTCAGAACCATGAACAGCTGCTCGATGCTGTGACCGCTATTCCCGAAGCCTTCGCTATTTATG
ACGCGGCCGGGAATGTCATCATCCAGAACGCCGTTCACCAGCGCTGGTTCCCCAAGGGGATGGAGAAGACAGATTTCCGT
CCCGGTACGGAGATGCAGAAAGTTGCCGATGTTGGCGGCGTGATGCGCTCCTGTGTGCCGACGAGTTCGGGTGGGCGGGT
TATTATCCATACGGACGTTTCCAAGATGGAAGAGCTGCGTCAGGAAGCTGACGAGTCCCGCCGCGACGCCGAAGAAGCGC
GCCTGGCTGTGGAGCGTTTCGTCGGCTCGGTGACGCGCGAACTGCGCCTGCCGCTGCGCACCCTGCGCACGATTGCCTCG
CGCTTTGAAACGCGCAGCCAGATCCCGTTCGACGATAATGAAGTGCGCCTCTCCAGCGACAAGATGGTCAGCTTTGCCGA
CCAGGCGCTCAGCCTCGTGGACGAAGTGCTCTCGATCACGCAGGGCGGCGACAGCATTGTCGACGGCGCCGATGTATCGT
TGAAATCGACGCTGGCGCAGGTCATCACCCAGAAGCATTCGGCCATCACGACGCTTGGCGTCGACATTGATGAGCCCAGC
GGCCAGGACGCGATGATCGACAGTGCCAAGGCGGCGCGTGTTCTCTCGCGCGTGTTCTCGGCGGTGCTGCTTGAGCTTGG
CCAGGTGTGCCGGGGCGGCGGGTCCCTGCGTGTGCGCTGCGGTGTGCGCGGTGAACAGGGCTGGGTCTCGGTCGAGGCGG
CAAAGCTCGCCAATGGCAAGATGCAGTCGGAGCTGACTGAGGACTATCTCGCCGAAAGCTCAGAGAACCGGCTTGTGTGG
CGCGCGCTGATGCAGACCATCGGTGGACAGATCGAAATGCGCGAAGCGCGCAACGGGTCCATCGTCTACATCCTGAAGTT
CAACACCAACGCCACGTCGACCAAGTTGGGCGATGCCGAGGCGCTGGCGCGCCCGCATTCGGGACGCGCCGCTTAA

Upstream 100 bases:

>100_bases
GCACGTTCCCATCTCGGCGATCAGGTCGCCAAGGTCCATGCTGTCTGATTTTCCGCCGATGCGCGCGGCCTGTTCGATCA
GGGTGACCTGTGAATAGCCT

Downstream 100 bases:

>100_bases
GCTGCCTTCAGCCTTCCGGTTCAGTTTTCCGGGAGGGGCGTGAATTCCTGATCGTCGCCATCGGGCAGTTTCATCCGGCC
CTGTTTCCAGTCTTCCTTGG

Product: histidine kinase A domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 611; Mature: 610

Protein sequence:

>611_residues
MSLRYWVSVRPAGPAPTIAREVRFVGLIESYSLVNATVKVTRFGKNPSSSCPVSNGRMKMSIGLSDVVLFPIVGVGRFKR
RETPDIPAYMHHRLVSLLTVMGFINLVNSAAVVFTLFGTTNTALLFGWMIPIWVFAISQIAWSRSRWDRSPTRPVRGRFL
RKAEVATGVVGAWWGLCVMLAPVGDVGLKVSMFAIVFGMCAGVVAVVSPVANVAARFLLGAATTATIGFFLAPVGLPATI
VMLGLVLTLASAFASLNAYRNLLMEMEAKRLAAQNHEQLLDAVTAIPEAFAIYDAAGNVIIQNAVHQRWFPKGMEKTDFR
PGTEMQKVADVGGVMRSCVPTSSGGRVIIHTDVSKMEELRQEADESRRDAEEARLAVERFVGSVTRELRLPLRTLRTIAS
RFETRSQIPFDDNEVRLSSDKMVSFADQALSLVDEVLSITQGGDSIVDGADVSLKSTLAQVITQKHSAITTLGVDIDEPS
GQDAMIDSAKAARVLSRVFSAVLLELGQVCRGGGSLRVRCGVRGEQGWVSVEAAKLANGKMQSELTEDYLAESSENRLVW
RALMQTIGGQIEMREARNGSIVYILKFNTNATSTKLGDAEALARPHSGRAA

Sequences:

>Translated_611_residues
MSLRYWVSVRPAGPAPTIAREVRFVGLIESYSLVNATVKVTRFGKNPSSSCPVSNGRMKMSIGLSDVVLFPIVGVGRFKR
RETPDIPAYMHHRLVSLLTVMGFINLVNSAAVVFTLFGTTNTALLFGWMIPIWVFAISQIAWSRSRWDRSPTRPVRGRFL
RKAEVATGVVGAWWGLCVMLAPVGDVGLKVSMFAIVFGMCAGVVAVVSPVANVAARFLLGAATTATIGFFLAPVGLPATI
VMLGLVLTLASAFASLNAYRNLLMEMEAKRLAAQNHEQLLDAVTAIPEAFAIYDAAGNVIIQNAVHQRWFPKGMEKTDFR
PGTEMQKVADVGGVMRSCVPTSSGGRVIIHTDVSKMEELRQEADESRRDAEEARLAVERFVGSVTRELRLPLRTLRTIAS
RFETRSQIPFDDNEVRLSSDKMVSFADQALSLVDEVLSITQGGDSIVDGADVSLKSTLAQVITQKHSAITTLGVDIDEPS
GQDAMIDSAKAARVLSRVFSAVLLELGQVCRGGGSLRVRCGVRGEQGWVSVEAAKLANGKMQSELTEDYLAESSENRLVW
RALMQTIGGQIEMREARNGSIVYILKFNTNATSTKLGDAEALARPHSGRAA
>Mature_610_residues
SLRYWVSVRPAGPAPTIAREVRFVGLIESYSLVNATVKVTRFGKNPSSSCPVSNGRMKMSIGLSDVVLFPIVGVGRFKRR
ETPDIPAYMHHRLVSLLTVMGFINLVNSAAVVFTLFGTTNTALLFGWMIPIWVFAISQIAWSRSRWDRSPTRPVRGRFLR
KAEVATGVVGAWWGLCVMLAPVGDVGLKVSMFAIVFGMCAGVVAVVSPVANVAARFLLGAATTATIGFFLAPVGLPATIV
MLGLVLTLASAFASLNAYRNLLMEMEAKRLAAQNHEQLLDAVTAIPEAFAIYDAAGNVIIQNAVHQRWFPKGMEKTDFRP
GTEMQKVADVGGVMRSCVPTSSGGRVIIHTDVSKMEELRQEADESRRDAEEARLAVERFVGSVTRELRLPLRTLRTIASR
FETRSQIPFDDNEVRLSSDKMVSFADQALSLVDEVLSITQGGDSIVDGADVSLKSTLAQVITQKHSAITTLGVDIDEPSG
QDAMIDSAKAARVLSRVFSAVLLELGQVCRGGGSLRVRCGVRGEQGWVSVEAAKLANGKMQSELTEDYLAESSENRLVWR
ALMQTIGGQIEMREARNGSIVYILKFNTNATSTKLGDAEALARPHSGRAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66266; Mature: 66134

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRYWVSVRPAGPAPTIAREVRFVGLIESYSLVNATVKVTRFGKNPSSSCPVSNGRMKM
CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEE
SIGLSDVVLFPIVGVGRFKRRETPDIPAYMHHRLVSLLTVMGFINLVNSAAVVFTLFGTT
EECCHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
NTALLFGWMIPIWVFAISQIAWSRSRWDRSPTRPVRGRFLRKAEVATGVVGAWWGLCVML
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
APVGDVGLKVSMFAIVFGMCAGVVAVVSPVANVAARFLLGAATTATIGFFLAPVGLPATI
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VMLGLVLTLASAFASLNAYRNLLMEMEAKRLAAQNHEQLLDAVTAIPEAFAIYDAAGNVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHH
IQNAVHQRWFPKGMEKTDFRPGTEMQKVADVGGVMRSCVPTSSGGRVIIHTDVSKMEELR
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHH
QEADESRRDAEEARLAVERFVGSVTRELRLPLRTLRTIASRFETRSQIPFDDNEVRLSSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCC
KMVSFADQALSLVDEVLSITQGGDSIVDGADVSLKSTLAQVITQKHSAITTLGVDIDEPS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCC
GQDAMIDSAKAARVLSRVFSAVLLELGQVCRGGGSLRVRCGVRGEQGWVSVEAAKLANGK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEHHHHHCCH
MQSELTEDYLAESSENRLVWRALMQTIGGQIEMREARNGSIVYILKFNTNATSTKLGDAE
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCCCCCCCHH
ALARPHSGRAA
HHCCCCCCCCC
>Mature Secondary Structure 
SLRYWVSVRPAGPAPTIAREVRFVGLIESYSLVNATVKVTRFGKNPSSSCPVSNGRMKM
CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEE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HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA