| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799629
Identifier: 114799629
GI number: 114799629
Start: 1630706
End: 1632163
Strand: Reverse
Name: 114799629
Synonym: HNE_1599
Alternate gene names: NA
Gene position: 1632163-1630706 (Counterclockwise)
Preceding gene: 114799182
Following gene: 114800432
Centisome position: 44.05
GC content: 52.47
Gene sequence:
>1458_bases TTGGTAGTCTGCAATCGCATCTACCATTCGCCGTACTGGCAAACATTTCACGACTTTTTGAAGGAGTTTCTGTTCTCCCT TCTGGGGCGAGAGTGGCTCCGCGAGGAAACTGCTAAGGCACCGGAAATCCAACACCCTATTGCTCGCTGGGTTGTGATGG CCCAAGCGGACGTGACTCCTGTGCCGATCATCAATGGCCTGCGGCATGGTGATATGACCGGCGCGATGAAAGCATTCATG CAACTTGCTTACAATCTGTACCTGATCGCTCACAACTCGCCCCCTGACGATGCGTTTGATCGTGTTCGTGGATACATTGC GCGGCTTAAGCAAAGGCATTTCGGGAATTTCCTGGGCGCACTGTATGAGACCTATGCCGCTGCGGCCTTTCTTAAAGCTG GATTTAATATTCAGTATGAAGAGGAACACAAGGGTGAGAGACGCTATACTGAGTTCGTGGCAGTGTACCCGCAGACTGGC CGGACATTCTCGGTGGAGGCAAAGGCGAGGGATTCTTCTGGGGCGCCGCAGGATGACGAAGTTAAGCGACTGAGGGTGAA AAGTAAGTTAATCAGTGCGCTGAATAAATATTCAGAACATGAGCGTATTGTGATGATTGAACTGAATGTGCCTGACGAGG TGGGCGAGGACTTTGCAAACCAGTGGCCCGCAGCAGCGATGGATCAAATTCGGTCGGCGGAAGGGCTTACGAAAAACGAC GGGCAAGAGTTTGATCCTGCCTACGTAATCGTCACCAATCACAACTATCACTCCCGGCTGGATGCCCGCGTGCAAACGCA AGCTTTGGGCTTTGGGTACAAAATTCCGGATTTTGCACCCGCCGTGCCAATCTCTAGCTTCTATGAGTACGTGTGTTCGC AAGAGAGGCATTTGGAAATTGATGCGCTCATGAATTCTTTGAAAGACCACTCTCATATTCCCGCGACCTTTGACGGCGAG CAGCCGGAATTGGCATTCGATCCGGACCAGCGCCCGAGGCTGAAGGTTGGTGAGATTTATGAAATCCCATCTGTCGATGG TGATCCGGTCGCAGGTTTGCTGGAGAGCGGGACGGTGATTGAATCGCAGCAATTGGCGTATTGTGTGCACCGCTTGGAAA ATGGCACCCGCATTCTCGCGACGCACCCTTTGTCAGACTCGGAAATGATCGTCTGGCGGCGTAATCCGTCGATTTTCTTC GGCGAGGAAGATCGAATTAAGAAGCCAGCGGAGTCACCGCTCGACTTCGCCATATTCCTGTATGAATCCTACAAGAATAC CGACCGCACCAAATTAGAAGAGTGGCTTTCGCCGTGGGTGCCAGCGGCTGCGTTGGCGGAAATGGATCAAAAGCAGTTAG CCGCGAGGTATTGCGAGGGCATGGCAATGCAAATGTGGAAGACGACACAAGCAAACAAACCTGGTGGAAAAGTCAGTGGG GACTCCGCTGGGGACTGA
Upstream 100 bases:
>100_bases GGCTAAGGCGCTTGGCGCGAAAATCCAAAAAGCAGCGCACCAGAGAGAACAGGGGTTCGGTAAGCCGATTATTTCTGTCG AAGCGTCCGGTCAGCGCTTA
Downstream 100 bases:
>100_bases AAAGTCAAAACCTGTTTTTGTTGCTGGGGGATGGTGCCCCGGGGCAGAGAACACCGCCCCAGACCAGCGGGAAGGCAAGC GTAATCGTCCTCGCATGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MVVCNRIYHSPYWQTFHDFLKEFLFSLLGREWLREETAKAPEIQHPIARWVVMAQADVTPVPIINGLRHGDMTGAMKAFM QLAYNLYLIAHNSPPDDAFDRVRGYIARLKQRHFGNFLGALYETYAAAAFLKAGFNIQYEEEHKGERRYTEFVAVYPQTG RTFSVEAKARDSSGAPQDDEVKRLRVKSKLISALNKYSEHERIVMIELNVPDEVGEDFANQWPAAAMDQIRSAEGLTKND GQEFDPAYVIVTNHNYHSRLDARVQTQALGFGYKIPDFAPAVPISSFYEYVCSQERHLEIDALMNSLKDHSHIPATFDGE QPELAFDPDQRPRLKVGEIYEIPSVDGDPVAGLLESGTVIESQQLAYCVHRLENGTRILATHPLSDSEMIVWRRNPSIFF GEEDRIKKPAESPLDFAIFLYESYKNTDRTKLEEWLSPWVPAAALAEMDQKQLAARYCEGMAMQMWKTTQANKPGGKVSG DSAGD
Sequences:
>Translated_485_residues MVVCNRIYHSPYWQTFHDFLKEFLFSLLGREWLREETAKAPEIQHPIARWVVMAQADVTPVPIINGLRHGDMTGAMKAFM QLAYNLYLIAHNSPPDDAFDRVRGYIARLKQRHFGNFLGALYETYAAAAFLKAGFNIQYEEEHKGERRYTEFVAVYPQTG RTFSVEAKARDSSGAPQDDEVKRLRVKSKLISALNKYSEHERIVMIELNVPDEVGEDFANQWPAAAMDQIRSAEGLTKND GQEFDPAYVIVTNHNYHSRLDARVQTQALGFGYKIPDFAPAVPISSFYEYVCSQERHLEIDALMNSLKDHSHIPATFDGE QPELAFDPDQRPRLKVGEIYEIPSVDGDPVAGLLESGTVIESQQLAYCVHRLENGTRILATHPLSDSEMIVWRRNPSIFF GEEDRIKKPAESPLDFAIFLYESYKNTDRTKLEEWLSPWVPAAALAEMDQKQLAARYCEGMAMQMWKTTQANKPGGKVSG DSAGD >Mature_485_residues MVVCNRIYHSPYWQTFHDFLKEFLFSLLGREWLREETAKAPEIQHPIARWVVMAQADVTPVPIINGLRHGDMTGAMKAFM QLAYNLYLIAHNSPPDDAFDRVRGYIARLKQRHFGNFLGALYETYAAAAFLKAGFNIQYEEEHKGERRYTEFVAVYPQTG RTFSVEAKARDSSGAPQDDEVKRLRVKSKLISALNKYSEHERIVMIELNVPDEVGEDFANQWPAAAMDQIRSAEGLTKND GQEFDPAYVIVTNHNYHSRLDARVQTQALGFGYKIPDFAPAVPISSFYEYVCSQERHLEIDALMNSLKDHSHIPATFDGE QPELAFDPDQRPRLKVGEIYEIPSVDGDPVAGLLESGTVIESQQLAYCVHRLENGTRILATHPLSDSEMIVWRRNPSIFF GEEDRIKKPAESPLDFAIFLYESYKNTDRTKLEEWLSPWVPAAALAEMDQKQLAARYCEGMAMQMWKTTQANKPGGKVSG DSAGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55083; Mature: 55083
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVCNRIYHSPYWQTFHDFLKEFLFSLLGREWLREETAKAPEIQHPIARWVVMAQADVTP CEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC VPIINGLRHGDMTGAMKAFMQLAYNLYLIAHNSPPDDAFDRVRGYIARLKQRHFGNFLGA CHHHCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH LYETYAAAAFLKAGFNIQYEEEHKGERRYTEFVAVYPQTGRTFSVEAKARDSSGAPQDDE HHHHHHHHHHHHHCCCCEECHHHCCHHHEEEEEEEECCCCCEEEEEECCCCCCCCCCCHH VKRLRVKSKLISALNKYSEHERIVMIELNVPDEVGEDFANQWPAAAMDQIRSAEGLTKND HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCC GQEFDPAYVIVTNHNYHSRLDARVQTQALGFGYKIPDFAPAVPISSFYEYVCSQERHLEI CCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEH DALMNSLKDHSHIPATFDGEQPELAFDPDQRPRLKVGEIYEIPSVDGDPVAGLLESGTVI HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHCCCCEE ESQQLAYCVHRLENGTRILATHPLSDSEMIVWRRNPSIFFGEEDRIKKPAESPLDFAIFL CHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCEEECCHHHCCCCCCCCCCEEEEE YESYKNTDRTKLEEWLSPWVPAAALAEMDQKQLAARYCEGMAMQMWKTTQANKPGGKVSG EHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DSAGD CCCCC >Mature Secondary Structure MVVCNRIYHSPYWQTFHDFLKEFLFSLLGREWLREETAKAPEIQHPIARWVVMAQADVTP CEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC VPIINGLRHGDMTGAMKAFMQLAYNLYLIAHNSPPDDAFDRVRGYIARLKQRHFGNFLGA CHHHCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH LYETYAAAAFLKAGFNIQYEEEHKGERRYTEFVAVYPQTGRTFSVEAKARDSSGAPQDDE HHHHHHHHHHHHHCCCCEECHHHCCHHHEEEEEEEECCCCCEEEEEECCCCCCCCCCCHH VKRLRVKSKLISALNKYSEHERIVMIELNVPDEVGEDFANQWPAAAMDQIRSAEGLTKND HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCC GQEFDPAYVIVTNHNYHSRLDARVQTQALGFGYKIPDFAPAVPISSFYEYVCSQERHLEI CCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEH DALMNSLKDHSHIPATFDGEQPELAFDPDQRPRLKVGEIYEIPSVDGDPVAGLLESGTVI HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHCCCCEE ESQQLAYCVHRLENGTRILATHPLSDSEMIVWRRNPSIFFGEEDRIKKPAESPLDFAIFL CHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCEEECCHHHCCCCCCCCCCEEEEE YESYKNTDRTKLEEWLSPWVPAAALAEMDQKQLAARYCEGMAMQMWKTTQANKPGGKVSG EHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DSAGD CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA